RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 A0A087X002 238 aa10.34□□□□□ -0.75
PTPRA-205ENST00000399903 C8orf87E5RJ46 101 aa10.34□□□□□ -0.75
PTPRA-205ENST00000399903 NOTCH2NLQ7Z3S9 236 aa10.34□□□□□ -0.75
PTPRA-205ENST00000399903 H3BS24 57 aa10.3□□□□□ -0.76
PTPRA-205ENST00000399903 PANO1I0J062 215 aa10.3□□□□□ -0.76
PTPRA-205ENST00000399903 MRPL34Q9BQ48 92 aaKnown RBP10.29□□□□□ -0.76
PTPRA-205ENST00000399903 DYNC2H1Q8NCM8 4307 aaKnown RBP10.28□□□□□ -0.76
PTPRA-205ENST00000399903 PLAC8Q9NZF1 115 aa10.28□□□□□ -0.76
PTPRA-205ENST00000399903 A0A1B0GVX0 72 aa10.28□□□□□ -0.76
PTPRA-205ENST00000399903 FBN3Q75N90 2809 aa10.27□□□□□ -0.76
PTPRA-205ENST00000399903 NBDYA0A0U1RRE5 68 aa10.27□□□□□ -0.76
PTPRA-205ENST00000399903 Q96NJ1 140 aa10.27□□□□□ -0.77
PTPRA-205ENST00000399903 SPRR1BP22528 89 aa10.26□□□□□ -0.77
PTPRA-205ENST00000399903 Q6ZR54 194 aa10.26□□□□□ -0.77
PTPRA-205ENST00000399903 DNAH2Q9P225 4427 aa10.23□□□□□ -0.77
PTPRA-205ENST00000399903 Q5W150 140 aa10.23□□□□□ -0.77
PTPRA-205ENST00000399903 VPS13DQ5THJ4 4388 aa10.22□□□□□ -0.77
PTPRA-205ENST00000399903 A0A1B0GU69 56 aa10.21□□□□□ -0.77
PTPRA-205ENST00000399903 NUPR2A6NF83 97 aa10.2□□□□□ -0.78
PTPRA-205ENST00000399903 ACYP2P14621 99 aa10.19□□□□□ -0.78
PTPRA-205ENST00000399903 FRAS1Q86XX4 4008 aa10.18□□□□□ -0.78
PTPRA-205ENST00000399903 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.17□□□□□ -0.78
PTPRA-205ENST00000399903 Q6ZRN7 208 aaPredicted RBP10.16□□□□□ -0.78
PTPRA-205ENST00000399903 LINC01554Q52M75 96 aa10.16□□□□□ -0.78
PTPRA-205ENST00000399903 ASB16-AS1Q495Z4 193 aa10.13□□□□□ -0.79
PTPRA-205ENST00000399903 HECTD4Q9Y4D8 3996 aa10.13□□□□□ -0.79
PTPRA-205ENST00000399903 C14orf177Q52M58 125 aa10.13□□□□□ -0.79
PTPRA-205ENST00000399903 CIRBP-AS1Q8TBR5 109 aa10.12□□□□□ -0.79
PTPRA-205ENST00000399903 LY6G6CO95867 125 aa10.1□□□□□ -0.79
PTPRA-205ENST00000399903 MIR22HGQ0VDD5 57 aa10.09□□□□□ -0.79
PTPRA-205ENST00000399903 A0A087WTM6 91 aa10.08□□□□□ -0.8
PTPRA-205ENST00000399903 DNAH6Q9C0G6 4158 aa10.07□□□□□ -0.8
PTPRA-205ENST00000399903 CSAG1Q6PB30 78 aa10.06□□□□□ -0.8
PTPRA-205ENST00000399903 SPINK1P00995 79 aa10.04□□□□□ -0.8
PTPRA-205ENST00000399903 PLA2G1BP04054 148 aaKnown RBP10.04□□□□□ -0.8
PTPRA-205ENST00000399903 DNAH17Q9UFH2 4485 aa10.04□□□□□ -0.8
PTPRA-205ENST00000399903 RTL8CO15255 209 aa10.04□□□□□ -0.8
PTPRA-205ENST00000399903 KRTAP13-1Q8IUC0 172 aa10.03□□□□□ -0.8
PTPRA-205ENST00000399903 WWC2-AS2Q96NR7 200 aa10.03□□□□□ -0.8
PTPRA-205ENST00000399903 DNAH11Q96DT5 4516 aa10.02□□□□□ -0.81
PTPRA-205ENST00000399903 DNAH8Q96JB1 4490 aa10.02□□□□□ -0.81
PTPRA-205ENST00000399903 UQCR11O14957 56 aa10.02□□□□□ -0.81
PTPRA-205ENST00000399903 HYDINQ4G0P3 5121 aa10□□□□□ -0.81
PTPRA-205ENST00000399903 PSORS1C2Q9UIG4 136 aa10□□□□□ -0.81
PTPRA-205ENST00000399903 IGKV2D-30A0A075B6S6 120 aa10□□□□□ -0.81
PTPRA-205ENST00000399903 IGKV2-30P06310 120 aa10□□□□□ -0.81
PTPRA-205ENST00000399903 SPACA4Q8TDM5 124 aa9.99□□□□□ -0.81
PTPRA-205ENST00000399903 ZNF706Q9Y5V0 76 aaPredicted RBP9.98□□□□□ -0.81
PTPRA-205ENST00000399903 FLG2Q5D862 2391 aaPredicted RBP9.97□□□□□ -0.81
PTPRA-205ENST00000399903 IGLV5-52A0A0A0MRZ9 124 aa9.96□□□□□ -0.81
PTPRA-205ENST00000399903 C1orf134Q5TEV5 83 aa9.95□□□□□ -0.82
PTPRA-205ENST00000399903 SPATA8Q6RVD6 105 aa9.95□□□□□ -0.82
PTPRA-205ENST00000399903 DMAC1Q96GE9 116 aa9.95□□□□□ -0.82
PTPRA-205ENST00000399903 DNAH5Q8TE73 4624 aa9.92□□□□□ -0.82
PTPRA-205ENST00000399903 LINC00483Q53H64 154 aa9.9□□□□□ -0.82
PTPRA-205ENST00000399903 KRTAP10-2P60368 255 aa9.9□□□□□ -0.83
PTPRA-205ENST00000399903 KRTAP13-3Q3SY46 172 aa9.89□□□□□ -0.83
PTPRA-205ENST00000399903 ZNF861PO60384 105 aa9.88□□□□□ -0.83
PTPRA-205ENST00000399903 FAM229AH3BQW9 127 aa9.86□□□□□ -0.83
PTPRA-205ENST00000399903 LRP1BQ9NZR2 4599 aa9.84□□□□□ -0.83
PTPRA-205ENST00000399903 Q8N1X5 172 aa9.8□□□□□ -0.84
PTPRA-205ENST00000399903 ALMS1Q8TCU4 4167 aa9.78□□□□□ -0.84
PTPRA-205ENST00000399903 FAT2Q9NYQ8 4349 aa9.75□□□□□ -0.85
PTPRA-205ENST00000399903 CRIPTQ9P021 101 aa9.75□□□□□ -0.85
PTPRA-205ENST00000399903 PKHD1P08F94 4074 aa9.74□□□□□ -0.85
PTPRA-205ENST00000399903 KRTAP10-1P60331 282 aa9.72□□□□□ -0.85
PTPRA-205ENST00000399903 IGLV7-43P04211 117 aa9.7□□□□□ -0.86
PTPRA-205ENST00000399903 PKD1P98161 4303 aa9.69□□□□□ -0.86
PTPRA-205ENST00000399903 VPS13BQ7Z7G8 4022 aa9.67□□□□□ -0.86
PTPRA-205ENST00000399903 SACSQ9NZJ4 4579 aa9.67□□□□□ -0.86
PTPRA-205ENST00000399903 DMBT1Q9UGM3 2413 aaPredicted RBP9.66□□□□□ -0.86
PTPRA-205ENST00000399903 SSBP3-AS1Q7Z2R9 100 aa9.62□□□□□ -0.87
PTPRA-205ENST00000399903 FAT1Q14517 4588 aa9.58□□□□□ -0.88
PTPRA-205ENST00000399903 SMR3BP02814 79 aaPredicted RBP9.55□□□□□ -0.88
PTPRA-205ENST00000399903 H0YAA0 97 aa9.54□□□□□ -0.88
PTPRA-205ENST00000399903 Q6ZSA8 131 aa9.54□□□□□ -0.88
PTPRA-205ENST00000399903 TYMSOSQ8TAI1 123 aa9.54□□□□□ -0.88
PTPRA-205ENST00000399903 KRTAP25-1Q3LHN0 102 aa9.53□□□□□ -0.88
PTPRA-205ENST00000399903 LINC00304Q8N9R0 145 aa9.53□□□□□ -0.88
PTPRA-205ENST00000399903 KRTAP16-1A8MUX0 517 aa9.52□□□□□ -0.89
PTPRA-205ENST00000399903 KRTAP13-2Q52LG2 175 aa9.52□□□□□ -0.89
PTPRA-205ENST00000399903 DYNC1H1Q14204 4646 aaKnown RBP9.51□□□□□ -0.89
PTPRA-205ENST00000399903 KMT2CQ8NEZ4 4911 aaKnown RBP9.5□□□□□ -0.89
PTPRA-205ENST00000399903 ROMO1P60602 79 aa9.49□□□□□ -0.89
PTPRA-205ENST00000399903 A8MUU9 505 aa9.48□□□□□ -0.89
PTPRA-205ENST00000399903 A0A1B0GU33 70 aa9.48□□□□□ -0.89
PTPRA-205ENST00000399903 C9orf92A6NGG3 77 aa9.39□□□□□ -0.91
PTPRA-205ENST00000399903 KRTAP1-4P0C5Y4 121 aa9.39□□□□□ -0.91
PTPRA-205ENST00000399903 K7ERS5 55 aa9.38□□□□□ -0.91
PTPRA-205ENST00000399903 A0A0A0MQY5 61 aa9.36□□□□□ -0.91
PTPRA-205ENST00000399903 KRTAP21-3Q3LHN1 58 aa9.35□□□□□ -0.91
PTPRA-205ENST00000399903 H1FX-AS1Q4G0G2 97 aa9.34□□□□□ -0.91
PTPRA-205ENST00000399903 RYR2Q92736 4967 aa9.32□□□□□ -0.92
PTPRA-205ENST00000399903 APOBP04114 4563 aaKnown RBP9.31□□□□□ -0.92
PTPRA-205ENST00000399903 SPINT4Q6UDR6 99 aa9.3□□□□□ -0.92
PTPRA-205ENST00000399903 A0A0D9SG42 100 aa9.28□□□□□ -0.92
PTPRA-205ENST00000399903 P0C880 135 aa9.25□□□□□ -0.93
PTPRA-205ENST00000399903 LRP1Q07954 4544 aaKnown RBP9.2□□□□□ -0.94
PTPRA-205ENST00000399903 COX6B2Q6YFQ2 88 aa9.19□□□□□ -0.94
PTPRA-205ENST00000399903 KRTAP3-1Q9BYR8 98 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms