RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 Q75L30 129 aa7.15□□□□□ -1.27
COL25A1-202ENST00000399127 ANAPC11Q9NYG5 84 aa7.15□□□□□ -1.27
COL25A1-202ENST00000399127 PKD1P98161 4303 aa7.14□□□□□ -1.27
COL25A1-202ENST00000399127 FAT2Q9NYQ8 4349 aa7.14□□□□□ -1.27
COL25A1-202ENST00000399127 RPL37AP61513 92 aaKnown RBP7.13□□□□□ -1.27
COL25A1-202ENST00000399127 CDC42SE1Q9NRR8 79 aa7.13□□□□□ -1.27
COL25A1-202ENST00000399127 MOBPQ13875 183 aa7.11□□□□□ -1.27
COL25A1-202ENST00000399127 PRR26Q8N8Z3 221 aa7.11□□□□□ -1.27
COL25A1-202ENST00000399127 NDUFB1O75438 58 aa7.1□□□□□ -1.27
COL25A1-202ENST00000399127 LINC00208Q96KT6 92 aa7.1□□□□□ -1.27
COL25A1-202ENST00000399127 ZNF861PO60384 105 aa7.09□□□□□ -1.27
COL25A1-202ENST00000399127 LOC101927531A0A1B0GV80 90 aa7.08□□□□□ -1.28
COL25A1-202ENST00000399127 CIRBP-AS1Q8TBR5 109 aa7.08□□□□□ -1.28
COL25A1-202ENST00000399127 LRP1BQ9NZR2 4599 aa7.08□□□□□ -1.28
COL25A1-202ENST00000399127 LINC00483Q53H64 154 aa7.07□□□□□ -1.28
COL25A1-202ENST00000399127 WFDC13Q8IUB5 93 aa7.07□□□□□ -1.28
COL25A1-202ENST00000399127 ZNF706Q9Y5V0 76 aaPredicted RBP7.06□□□□□ -1.28
COL25A1-202ENST00000399127 LINC00472Q9H8W2 130 aa7.05□□□□□ -1.28
COL25A1-202ENST00000399127 IGLV7-43P04211 117 aa7.05□□□□□ -1.28
COL25A1-202ENST00000399127 KRTAP10-1P60331 282 aa7.05□□□□□ -1.28
COL25A1-202ENST00000399127 PRAC1Q96KF2 57 aa7.04□□□□□ -1.28
COL25A1-202ENST00000399127 PKHD1P08F94 4074 aa7.04□□□□□ -1.28
COL25A1-202ENST00000399127 LINC00313P59037 77 aa7.03□□□□□ -1.28
COL25A1-202ENST00000399127 LINC01554Q52M75 96 aa7.03□□□□□ -1.28
COL25A1-202ENST00000399127 SACSQ9NZJ4 4579 aa7.03□□□□□ -1.28
COL25A1-202ENST00000399127 SPANXA2-OT1Q8N9U9 137 aa7.01□□□□□ -1.29
COL25A1-202ENST00000399127 A8MWP4 228 aa7□□□□□ -1.29
COL25A1-202ENST00000399127 MP68P56378 58 aa7□□□□□ -1.29
COL25A1-202ENST00000399127 VPS13BQ7Z7G8 4022 aa6.99□□□□□ -1.29
COL25A1-202ENST00000399127 Q96NJ1 140 aa6.99□□□□□ -1.29
COL25A1-202ENST00000399127 CASC2Q6XLA1 102 aa6.98□□□□□ -1.29
COL25A1-202ENST00000399127 Q6ZSA8 131 aa6.97□□□□□ -1.29
COL25A1-202ENST00000399127 COA5Q86WW8 74 aa6.97□□□□□ -1.29
COL25A1-202ENST00000399127 KRTAP29-1A8MX34 341 aaPredicted RBP6.96□□□□□ -1.29
COL25A1-202ENST00000399127 SPINK7P58062 85 aa6.96□□□□□ -1.3
COL25A1-202ENST00000399127 ADM2Q7Z4H4 148 aa6.96□□□□□ -1.3
COL25A1-202ENST00000399127 MMP24-AS1A0A0U1RRL7 71 aa6.93□□□□□ -1.3
COL25A1-202ENST00000399127 LINC01558Q9Y6Z2 57 aa6.93□□□□□ -1.3
COL25A1-202ENST00000399127 A0A087X002 238 aa6.92□□□□□ -1.3
COL25A1-202ENST00000399127 IGHV6-1A0A0B4J1U7 121 aa6.92□□□□□ -1.3
COL25A1-202ENST00000399127 SPINK6Q6UWN8 80 aa6.92□□□□□ -1.3
COL25A1-202ENST00000399127 SPAG11AQ6PDA7 123 aa6.92□□□□□ -1.3
COL25A1-202ENST00000399127 A0A1B0GVY2 172 aa6.91□□□□□ -1.3
COL25A1-202ENST00000399127 H0Y9P7 68 aa6.91□□□□□ -1.3
COL25A1-202ENST00000399127 RYR2Q92736 4967 aa6.88□□□□□ -1.31
COL25A1-202ENST00000399127 CDK2AP2O75956 126 aa6.88□□□□□ -1.31
COL25A1-202ENST00000399127 PLA2G1BP04054 148 aaKnown RBP6.88□□□□□ -1.31
COL25A1-202ENST00000399127 KMT2CQ8NEZ4 4911 aaKnown RBP6.88□□□□□ -1.31
COL25A1-202ENST00000399127 DYNC1H1Q14204 4646 aaKnown RBP6.88□□□□□ -1.31
COL25A1-202ENST00000399127 KRTAP13-2Q52LG2 175 aa6.88□□□□□ -1.31
COL25A1-202ENST00000399127 NOTCH2NLQ7Z3S9 236 aa6.88□□□□□ -1.31
COL25A1-202ENST00000399127 A0A1B0GVX0 72 aa6.87□□□□□ -1.31
COL25A1-202ENST00000399127 H3BPC8 53 aa6.87□□□□□ -1.31
COL25A1-202ENST00000399127 C8orf17Q9NRJ1 99 aa6.87□□□□□ -1.31
COL25A1-202ENST00000399127 SMR3BP02814 79 aaPredicted RBP6.86□□□□□ -1.31
COL25A1-202ENST00000399127 SSBP3-AS1Q7Z2R9 100 aa6.86□□□□□ -1.31
COL25A1-202ENST00000399127 IGLV7-46A0A075B6I9 117 aa6.84□□□□□ -1.31
COL25A1-202ENST00000399127 KRTAP1-4P0C5Y4 121 aa6.83□□□□□ -1.32
COL25A1-202ENST00000399127 FAT1Q14517 4588 aa6.82□□□□□ -1.32
COL25A1-202ENST00000399127 ASB16-AS1Q495Z4 193 aa6.82□□□□□ -1.32
COL25A1-202ENST00000399127 RETNLBQ9BQ08 111 aa6.81□□□□□ -1.32
COL25A1-202ENST00000399127 MRPL34Q9BQ48 92 aaKnown RBP6.79□□□□□ -1.32
COL25A1-202ENST00000399127 APOBP04114 4563 aaKnown RBP6.78□□□□□ -1.32
COL25A1-202ENST00000399127 PCOTHQ58A44 107 aa6.77□□□□□ -1.33
COL25A1-202ENST00000399127 TP53AIP1Q9HCN2 124 aa6.76□□□□□ -1.33
COL25A1-202ENST00000399127 TYMSOSQ8TAI1 123 aa6.75□□□□□ -1.33
COL25A1-202ENST00000399127 CSAG1Q6PB30 78 aa6.73□□□□□ -1.33
COL25A1-202ENST00000399127 RYR3Q15413 4870 aa6.73□□□□□ -1.33
COL25A1-202ENST00000399127 HRES1P13985 223 aa6.73□□□□□ -1.33
COL25A1-202ENST00000399127 Q5W150 140 aa6.71□□□□□ -1.34
COL25A1-202ENST00000399127 FAM229AH3BQW9 127 aa6.66□□□□□ -1.34
COL25A1-202ENST00000399127 SPINK1P00995 79 aa6.65□□□□□ -1.34
COL25A1-202ENST00000399127 KRTAP10-4P60372 401 aaPredicted RBP6.65□□□□□ -1.34
COL25A1-202ENST00000399127 LINC00304Q8N9R0 145 aa6.65□□□□□ -1.34
COL25A1-202ENST00000399127 KRTAP13-3Q3SY46 172 aa6.64□□□□□ -1.35
COL25A1-202ENST00000399127 SPATA8Q6RVD6 105 aa6.62□□□□□ -1.35
COL25A1-202ENST00000399127 Q5VSD8 79 aa6.61□□□□□ -1.35
COL25A1-202ENST00000399127 KRTAP16-1A8MUX0 517 aa6.61□□□□□ -1.35
COL25A1-202ENST00000399127 PKHD1L1Q86WI1 4243 aa6.6□□□□□ -1.35
COL25A1-202ENST00000399127 LRP1Q07954 4544 aaKnown RBP6.58□□□□□ -1.36
COL25A1-202ENST00000399127 ROMO1P60602 79 aa6.56□□□□□ -1.36
COL25A1-202ENST00000399127 HSPG2P98160 4391 aa6.56□□□□□ -1.36
COL25A1-202ENST00000399127 MIR22HGQ0VDD5 57 aa6.55□□□□□ -1.36
COL25A1-202ENST00000399127 KRTAP17-1Q9BYP8 105 aa6.54□□□□□ -1.36
COL25A1-202ENST00000399127 A0A1B0GU69 56 aa6.54□□□□□ -1.36
COL25A1-202ENST00000399127 RPS29P62273 56 aaKnown RBP6.52□□□□□ -1.37
COL25A1-202ENST00000399127 C9orf92A6NGG3 77 aa6.52□□□□□ -1.37
COL25A1-202ENST00000399127 IGKV2D-30A0A075B6S6 120 aa6.51□□□□□ -1.37
COL25A1-202ENST00000399127 IGKV2-30P06310 120 aa6.51□□□□□ -1.37
COL25A1-202ENST00000399127 EPPK1P58107 5090 aaKnown RBP6.5□□□□□ -1.37
COL25A1-202ENST00000399127 UQCR11O14957 56 aa6.5□□□□□ -1.37
COL25A1-202ENST00000399127 RYR1P21817 5038 aa6.49□□□□□ -1.37
COL25A1-202ENST00000399127 KIAA1109Q2LD37 5005 aa6.49□□□□□ -1.37
COL25A1-202ENST00000399127 FLG2Q5D862 2391 aaPredicted RBP6.48□□□□□ -1.37
COL25A1-202ENST00000399127 TNXBP22105 4242 aa6.48□□□□□ -1.37
COL25A1-202ENST00000399127 Q8N1X5 172 aa6.48□□□□□ -1.37
COL25A1-202ENST00000399127 ACYP2P14621 99 aa6.46□□□□□ -1.37
COL25A1-202ENST00000399127 MYCBP2O75592 4640 aa6.45□□□□□ -1.38
COL25A1-202ENST00000399127 KRTAP25-1Q3LHN0 102 aa6.44□□□□□ -1.38
COL25A1-202ENST00000399127 FAT3Q8TDW7 4589 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms