RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 COX7CP15954 63 aa6.63□□□□□ -1.35
TFF3-202ENST00000398431 HIST1H4AP62805 103 aaKnown RBP6.63□□□□□ -1.35
TFF3-202ENST00000398431 C9orf153Q5TBE3 101 aa6.63□□□□□ -1.35
TFF3-202ENST00000398431 Q6ZRX8 168 aa6.63□□□□□ -1.35
TFF3-202ENST00000398431 SERP2Q8N6R1 65 aa6.6□□□□□ -1.35
TFF3-202ENST00000398431 DHRS4-AS1Q9P1J3 65 aa6.6□□□□□ -1.35
TFF3-202ENST00000398431 SS18L2Q9UHA2 77 aa6.6□□□□□ -1.35
TFF3-202ENST00000398431 MT1HP80294 61 aa6.59□□□□□ -1.35
TFF3-202ENST00000398431 SMIM20Q8N5G0 67 aa6.59□□□□□ -1.35
TFF3-202ENST00000398431 CXCL6P80162 114 aa6.58□□□□□ -1.36
TFF3-202ENST00000398431 TRBV7-4A0A0J9YYF1 115 aa6.57□□□□□ -1.36
TFF3-202ENST00000398431 A0A1B0GW54 56 aa6.57□□□□□ -1.36
TFF3-202ENST00000398431 ST20-AS1Q8NBB2 130 aa6.56□□□□□ -1.36
TFF3-202ENST00000398431 PCOTHQ58A44 107 aa6.55□□□□□ -1.36
TFF3-202ENST00000398431 Q6ZVQ6 151 aa6.55□□□□□ -1.36
TFF3-202ENST00000398431 A0A087WVE0 104 aa6.53□□□□□ -1.36
TFF3-202ENST00000398431 IGLV8-61A0A075B6I0 122 aa6.52□□□□□ -1.37
TFF3-202ENST00000398431 LORP23490 312 aaPredicted RBP6.52□□□□□ -1.37
TFF3-202ENST00000398431 SPRR1BP22528 89 aa6.51□□□□□ -1.37
TFF3-202ENST00000398431 NREPQ16612 68 aa6.51□□□□□ -1.37
TFF3-202ENST00000398431 IGLV5-48A0A075B6I7 105 aa6.5□□□□□ -1.37
TFF3-202ENST00000398431 KRTAP10-6P60371 365 aaPredicted RBP6.5□□□□□ -1.37
TFF3-202ENST00000398431 TRAV7A0A075B6U4 112 aa6.49□□□□□ -1.37
TFF3-202ENST00000398431 C9orf92A6NGG3 77 aa6.49□□□□□ -1.37
TFF3-202ENST00000398431 TMEM258P61165 79 aa6.49□□□□□ -1.37
TFF3-202ENST00000398431 HRCT1Q6UXD1 115 aa6.49□□□□□ -1.37
TFF3-202ENST00000398431 DEFB105AQ8NG35 78 aa6.49□□□□□ -1.37
TFF3-202ENST00000398431 F8WEM9 126 aa6.47□□□□□ -1.37
TFF3-202ENST00000398431 LIMD2Q9BT23 127 aa6.46□□□□□ -1.38
TFF3-202ENST00000398431 BPY2O14599 106 aa6.45□□□□□ -1.38
TFF3-202ENST00000398431 RPS28P62857 69 aaKnown RBP6.45□□□□□ -1.38
TFF3-202ENST00000398431 J3KT08 172 aa6.44□□□□□ -1.38
TFF3-202ENST00000398431 SMIM29Q86T20 159 aa6.43□□□□□ -1.38
TFF3-202ENST00000398431 CD164Q04900 197 aa6.42□□□□□ -1.38
TFF3-202ENST00000398431 NDUFC1O43677 76 aa6.41□□□□□ -1.38
TFF3-202ENST00000398431 C1orf195Q5TG92 126 aa6.41□□□□□ -1.38
TFF3-202ENST00000398431 Q5XG85 94 aa6.4□□□□□ -1.38
TFF3-202ENST00000398431 C20orf197Q8N268 126 aa6.4□□□□□ -1.38
TFF3-202ENST00000398431 A0A0G2JQZ4 141 aa6.38□□□□□ -1.39
TFF3-202ENST00000398431 RPL37P61927 97 aaKnown RBP6.38□□□□□ -1.39
TFF3-202ENST00000398431 FLGP20930 4061 aaPredicted RBP6.37□□□□□ -1.39
TFF3-202ENST00000398431 M0R2T5 61 aa6.37□□□□□ -1.39
TFF3-202ENST00000398431 KLKP1Q107X0 134 aa6.37□□□□□ -1.39
TFF3-202ENST00000398431 A0A1W2PNM2 257 aa6.36□□□□□ -1.39
TFF3-202ENST00000398431 IGKV4-1P06312 121 aa6.36□□□□□ -1.39
TFF3-202ENST00000398431 ATP5EP56381 51 aaPredicted RBP6.35□□□□□ -1.39
TFF3-202ENST00000398431 FAM236DA0A1B0GTK5 79 aa6.34□□□□□ -1.39
TFF3-202ENST00000398431 FAM236CP0DP71 79 aa6.34□□□□□ -1.39
TFF3-202ENST00000398431 COX6B2Q6YFQ2 88 aa6.33□□□□□ -1.4
TFF3-202ENST00000398431 IGFL1Q6UW32 110 aa6.31□□□□□ -1.4
TFF3-202ENST00000398431 H7BZZ5 65 aa6.3□□□□□ -1.4
TFF3-202ENST00000398431 TMEM254Q8TBM7 123 aa6.3□□□□□ -1.4
TFF3-202ENST00000398431 CYSTM1Q9H1C7 97 aa6.3□□□□□ -1.4
TFF3-202ENST00000398431 SERP1Q9Y6X1 66 aa6.3□□□□□ -1.4
TFF3-202ENST00000398431 Q8N9L7 120 aa6.29□□□□□ -1.4
TFF3-202ENST00000398431 OCR1Q9BZK8 76 aa6.28□□□□□ -1.4
TFF3-202ENST00000398431 SNURFQ9Y675 71 aa6.28□□□□□ -1.4
TFF3-202ENST00000398431 SVIPQ8NHG7 77 aa6.26□□□□□ -1.41
TFF3-202ENST00000398431 HCG22E2RYF7 251 aa6.25□□□□□ -1.41
TFF3-202ENST00000398431 DSCR10P59022 87 aa6.25□□□□□ -1.41
TFF3-202ENST00000398431 C5orf47Q569G3 176 aa6.25□□□□□ -1.41
TFF3-202ENST00000398431 A0A087WSZ3 146 aa6.24□□□□□ -1.41
TFF3-202ENST00000398431 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.24□□□□□ -1.41
TFF3-202ENST00000398431 KRTAP9-8Q9BYQ0 159 aa6.23□□□□□ -1.41
TFF3-202ENST00000398431 KRTAP9-7A8MTY7 169 aa6.22□□□□□ -1.41
TFF3-202ENST00000398431 K7EQZ3 153 aa6.22□□□□□ -1.41
TFF3-202ENST00000398431 NDUFB1O75438 58 aa6.21□□□□□ -1.42
TFF3-202ENST00000398431 Q75L30 129 aa6.21□□□□□ -1.42
TFF3-202ENST00000398431 SMIM26A0A096LP01 95 aa6.2□□□□□ -1.42
TFF3-202ENST00000398431 MP68P56378 58 aa6.2□□□□□ -1.42
TFF3-202ENST00000398431 ATP11AUNQ6ZP68 121 aa6.19□□□□□ -1.42
TFF3-202ENST00000398431 A8MWP4 228 aa6.18□□□□□ -1.42
TFF3-202ENST00000398431 H3BPC8 53 aa6.18□□□□□ -1.42
TFF3-202ENST00000398431 SSPOA2VEC9 5147 aa6.18□□□□□ -1.42
TFF3-202ENST00000398431 USH2AO75445 5202 aa6.17□□□□□ -1.42
TFF3-202ENST00000398431 PRR15Q8IV56 129 aa6.17□□□□□ -1.42
TFF3-202ENST00000398431 CASC2Q6XLA1 102 aa6.16□□□□□ -1.42
TFF3-202ENST00000398431 WFDC13Q8IUB5 93 aa6.15□□□□□ -1.42
TFF3-202ENST00000398431 LINC00472Q9H8W2 130 aa6.15□□□□□ -1.42
TFF3-202ENST00000398431 DEFB116Q30KQ4 102 aa6.14□□□□□ -1.43
TFF3-202ENST00000398431 hDV103S1A0JD37 113 aa6.12□□□□□ -1.43
TFF3-202ENST00000398431 Q96NJ1 140 aa6.12□□□□□ -1.43
TFF3-202ENST00000398431 ZCCHC13Q8WW36 166 aaKnown RBP6.11□□□□□ -1.43
TFF3-202ENST00000398431 C20orf166-AS1Q96NR2 134 aa6.11□□□□□ -1.43
TFF3-202ENST00000398431 A8MUU9 505 aa6.1□□□□□ -1.43
TFF3-202ENST00000398431 TP53AIP1Q9HCN2 124 aa6.1□□□□□ -1.43
TFF3-202ENST00000398431 H0Y9P7 68 aa6.08□□□□□ -1.44
TFF3-202ENST00000398431 MT2AP02795 61 aa6.08□□□□□ -1.44
TFF3-202ENST00000398431 KRTAP16-1A8MUX0 517 aa6.07□□□□□ -1.44
TFF3-202ENST00000398431 LCE2BO14633 110 aa6.07□□□□□ -1.44
TFF3-202ENST00000398431 LINC00208Q96KT6 92 aa6.07□□□□□ -1.44
TFF3-202ENST00000398431 CYP4F30PQ9H0H9 118 aa6.07□□□□□ -1.44
TFF3-202ENST00000398431 C4orf26Q17RF5 130 aa6.06□□□□□ -1.44
TFF3-202ENST00000398431 TRAV22A0A0B4J277 110 aa6.05□□□□□ -1.44
TFF3-202ENST00000398431 KRTAP19-1Q8IUB9 90 aa6.05□□□□□ -1.44
TFF3-202ENST00000398431 SPANXA2-OT1Q8N9U9 137 aa6.05□□□□□ -1.44
TFF3-202ENST00000398431 FCGBPQ9Y6R7 5405 aaPredicted RBP6.05□□□□□ -1.44
TFF3-202ENST00000398431 MMP24-AS1A0A0U1RRL7 71 aa6.04□□□□□ -1.44
TFF3-202ENST00000398431 MT1FP04733 61 aa6.04□□□□□ -1.44
TFF3-202ENST00000398431 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms