RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 SEC61BP60468 96 aaKnown RBP9.13□□□□□ -0.95
LSS-202ENST00000397728 LINC00483Q53H64 154 aa9.12□□□□□ -0.95
LSS-202ENST00000397728 LINC00472Q9H8W2 130 aa9.11□□□□□ -0.95
LSS-202ENST00000397728 ZFHX4Q86UP3 3567 aa9.1□□□□□ -0.95
LSS-202ENST00000397728 MMP24-AS1A0A0U1RRL7 71 aa9.1□□□□□ -0.95
LSS-202ENST00000397728 ZCCHC13Q8WW36 166 aaKnown RBP9.1□□□□□ -0.95
LSS-202ENST00000397728 OCR1Q9BZK8 76 aa9.1□□□□□ -0.95
LSS-202ENST00000397728 VWFP04275 2813 aa9.06□□□□□ -0.96
LSS-202ENST00000397728 LINC01554Q52M75 96 aa9.06□□□□□ -0.96
LSS-202ENST00000397728 MIR22HGQ0VDD5 57 aa9.06□□□□□ -0.96
LSS-202ENST00000397728 KRTAP7-1Q8IUC3 87 aa9.05□□□□□ -0.96
LSS-202ENST00000397728 Q75L30 129 aa9.05□□□□□ -0.96
LSS-202ENST00000397728 OXTP01178 125 aa9.04□□□□□ -0.96
LSS-202ENST00000397728 FP248Q71RG6 208 aaPredicted RBP9.02□□□□□ -0.97
LSS-202ENST00000397728 SPINK7P58062 85 aa9.01□□□□□ -0.97
LSS-202ENST00000397728 TGP01266 2768 aa9.01□□□□□ -0.97
LSS-202ENST00000397728 HRES1P13985 223 aa8.99□□□□□ -0.97
LSS-202ENST00000397728 Q8N9P0 234 aaPredicted RBP8.98□□□□□ -0.97
LSS-202ENST00000397728 SPINT4Q6UDR6 99 aa8.96□□□□□ -0.98
LSS-202ENST00000397728 Q5W150 140 aa8.93□□□□□ -0.98
LSS-202ENST00000397728 LINC01558Q9Y6Z2 57 aa8.91□□□□□ -0.98
LSS-202ENST00000397728 KRTAP13-2Q52LG2 175 aa8.9□□□□□ -0.98
LSS-202ENST00000397728 CSAG1Q6PB30 78 aa8.9□□□□□ -0.99
LSS-202ENST00000397728 A0A0D9SG42 100 aa8.89□□□□□ -0.99
LSS-202ENST00000397728 CYSTM1Q9H1C7 97 aa8.88□□□□□ -0.99
LSS-202ENST00000397728 KRTAP13-1Q8IUC0 172 aa8.87□□□□□ -0.99
LSS-202ENST00000397728 CSMD1Q96PZ7 3565 aa8.85□□□□□ -0.99
LSS-202ENST00000397728 ASB16-AS1Q495Z4 193 aa8.85□□□□□ -0.99
LSS-202ENST00000397728 CSMD2Q7Z408 3487 aa8.84□□□□□ -0.99
LSS-202ENST00000397728 S4R3F8 94 aa8.83□□□□□ -1
LSS-202ENST00000397728 Q5VV11 94 aa8.8□□□□□ -1
LSS-202ENST00000397728 CRIPTQ9P021 101 aa8.8□□□□□ -1
LSS-202ENST00000397728 RPS29P62273 56 aaKnown RBP8.79□□□□□ -1
LSS-202ENST00000397728 NOTCH2NLQ7Z3S9 236 aa8.78□□□□□ -1
LSS-202ENST00000397728 SRRM2Q9UQ35 2752 aaKnown RBP8.78□□□□□ -1
LSS-202ENST00000397728 H3BS24 57 aa8.73□□□□□ -1.01
LSS-202ENST00000397728 CAMK2N1Q7Z7J9 78 aa8.72□□□□□ -1.01
LSS-202ENST00000397728 SPENQ96T58 3664 aaKnown RBP8.68□□□□□ -1.02
LSS-202ENST00000397728 A0A1B0GU33 70 aa8.68□□□□□ -1.02
LSS-202ENST00000397728 KRTAP29-1A8MX34 341 aaPredicted RBP8.66□□□□□ -1.02
LSS-202ENST00000397728 R4GN34 69 aa8.65□□□□□ -1.02
LSS-202ENST00000397728 KRTAP1-4P0C5Y4 121 aa8.62□□□□□ -1.03
LSS-202ENST00000397728 SVEP1Q4LDE5 3571 aa8.62□□□□□ -1.03
LSS-202ENST00000397728 DMAC1Q96GE9 116 aa8.59□□□□□ -1.03
LSS-202ENST00000397728 RPL37P61927 97 aaKnown RBP8.58□□□□□ -1.04
LSS-202ENST00000397728 FBN3Q75N90 2809 aa8.54□□□□□ -1.04
LSS-202ENST00000397728 A0A1B0GVY2 172 aa8.54□□□□□ -1.04
LSS-202ENST00000397728 CUBNO60494 3623 aa8.53□□□□□ -1.04
LSS-202ENST00000397728 ANK3Q12955 4377 aaKnown RBP8.52□□□□□ -1.05
LSS-202ENST00000397728 PRAC1Q96KF2 57 aa8.52□□□□□ -1.05
LSS-202ENST00000397728 H1FX-AS1Q4G0G2 97 aa8.49□□□□□ -1.05
LSS-202ENST00000397728 TRRAPQ9Y4A5 3859 aa8.49□□□□□ -1.05
LSS-202ENST00000397728 M0QZ58 72 aa8.49□□□□□ -1.05
LSS-202ENST00000397728 A6NN06 94 aa8.47□□□□□ -1.05
LSS-202ENST00000397728 LUZP6Q538Z0 58 aa8.46□□□□□ -1.06
LSS-202ENST00000397728 BSNQ9UPA5 3926 aa8.44□□□□□ -1.06
LSS-202ENST00000397728 ADM2Q7Z4H4 148 aa8.44□□□□□ -1.06
LSS-202ENST00000397728 C20orf166-AS1Q96NR2 134 aa8.43□□□□□ -1.06
LSS-202ENST00000397728 A8MUU9 505 aa8.4□□□□□ -1.07
LSS-202ENST00000397728 XP32Q5T750 250 aa8.4□□□□□ -1.07
LSS-202ENST00000397728 SPATA8Q6RVD6 105 aa8.37□□□□□ -1.07
LSS-202ENST00000397728 COL7A1Q02388 2944 aa8.36□□□□□ -1.07
LSS-202ENST00000397728 A0A0A0MQY5 61 aa8.35□□□□□ -1.07
LSS-202ENST00000397728 TPRXLQ17RH7 258 aa8.32□□□□□ -1.08
LSS-202ENST00000397728 PLAC4Q8WY50 150 aa8.32□□□□□ -1.08
LSS-202ENST00000397728 ROMO1P60602 79 aa8.27□□□□□ -1.08
LSS-202ENST00000397728 KRTAP10-8P60410 259 aa8.27□□□□□ -1.09
LSS-202ENST00000397728 MEGF8Q7Z7M0 2845 aa8.24□□□□□ -1.09
LSS-202ENST00000397728 KRTAP13-3Q3SY46 172 aa8.21□□□□□ -1.1
LSS-202ENST00000397728 KRTAP25-1Q3LHN0 102 aa8.17□□□□□ -1.1
LSS-202ENST00000397728 KRTAP16-1A8MUX0 517 aa8.13□□□□□ -1.11
LSS-202ENST00000397728 A8MU10 97 aa8.01□□□□□ -1.13
LSS-202ENST00000397728 ZNF469Q96JG9 3925 aaPredicted RBP7.97□□□□□ -1.13
LSS-202ENST00000397728 KRTAP10-10P60014 251 aa7.96□□□□□ -1.14
LSS-202ENST00000397728 VPS13CQ709C8 3753 aa7.94□□□□□ -1.14
LSS-202ENST00000397728 DNHD1Q96M86 4753 aa7.89□□□□□ -1.15
LSS-202ENST00000397728 HUWE1Q7Z6Z7 4374 aaKnown RBP7.84□□□□□ -1.15
LSS-202ENST00000397728 KRTAP4-5Q9BYR2 181 aa7.84□□□□□ -1.15
LSS-202ENST00000397728 AKAP9Q99996 3911 aa7.83□□□□□ -1.16
LSS-202ENST00000397728 MT1HL1P0DM35 61 aa7.8□□□□□ -1.16
LSS-202ENST00000397728 NDUFAF8A1L188 74 aa7.76□□□□□ -1.17
LSS-202ENST00000397728 TNP1P09430 55 aa7.73□□□□□ -1.17
LSS-202ENST00000397728 P0C880 135 aa7.67□□□□□ -1.18
LSS-202ENST00000397728 KRTAP10-4P60372 401 aaPredicted RBP7.67□□□□□ -1.18
LSS-202ENST00000397728 DNAH9Q9NYC9 4486 aa7.64□□□□□ -1.19
LSS-202ENST00000397728 PRO2289Q9P1D8 64 aa7.56□□□□□ -1.2
LSS-202ENST00000397728 PP632Q6XCG6 107 aa7.52□□□□□ -1.21
LSS-202ENST00000397728 CSMD3Q7Z407 3707 aa7.52□□□□□ -1.21
LSS-202ENST00000397728 H0YAA0 97 aa7.51□□□□□ -1.21
LSS-202ENST00000397728 DNAH5Q8TE73 4624 aa7.47□□□□□ -1.21
LSS-202ENST00000397728 ALMS1Q8TCU4 4167 aa7.46□□□□□ -1.22
LSS-202ENST00000397728 KRTAP3-1Q9BYR8 98 aa7.43□□□□□ -1.22
LSS-202ENST00000397728 PLECQ15149 4684 aaKnown RBP7.4□□□□□ -1.22
LSS-202ENST00000397728 C10orf95Q9H7T3 257 aa7.32□□□□□ -1.24
LSS-202ENST00000397728 DNAH11Q96DT5 4516 aa7.28□□□□□ -1.24
LSS-202ENST00000397728 PRKDCP78527 4128 aaKnown RBP7.27□□□□□ -1.25
LSS-202ENST00000397728 DNAH1Q9P2D7 4330 aa7.25□□□□□ -1.25
LSS-202ENST00000397728 STARD9Q9P2P6 4700 aa7.21□□□□□ -1.25
LSS-202ENST00000397728 DYNC1H1Q14204 4646 aaKnown RBP7.19□□□□□ -1.26
LSS-202ENST00000397728 RYR1P21817 5038 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms