RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 NOTCH2NLQ7Z3S9 236 aa14.37□□□□□ -0.11
CSNK1E-203ENST00000396832 NBDYA0A0U1RRE5 68 aa14.36□□□□□ -0.11
CSNK1E-203ENST00000396832 PRR26Q8N8Z3 221 aa14.35□□□□□ -0.11
CSNK1E-203ENST00000396832 CDK2AP2O75956 126 aa14.34□□□□□ -0.11
CSNK1E-203ENST00000396832 STARD9Q9P2P6 4700 aa14.33□□□□□ -0.12
CSNK1E-203ENST00000396832 SPINK6Q6UWN8 80 aa14.32□□□□□ -0.12
CSNK1E-203ENST00000396832 KMT2AQ03164 3969 aa14.3□□□□□ -0.12
CSNK1E-203ENST00000396832 HECTD4Q9Y4D8 3996 aa14.3□□□□□ -0.12
CSNK1E-203ENST00000396832 TGP01266 2768 aa14.3□□□□□ -0.12
CSNK1E-203ENST00000396832 DNAH8Q96JB1 4490 aa14.3□□□□□ -0.12
CSNK1E-203ENST00000396832 MEGF8Q7Z7M0 2845 aa14.29□□□□□ -0.12
CSNK1E-203ENST00000396832 PRKDCP78527 4128 aaKnown RBP14.29□□□□□ -0.12
CSNK1E-203ENST00000396832 Q6ZRN7 208 aaPredicted RBP14.28□□□□□ -0.12
CSNK1E-203ENST00000396832 SPACA4Q8TDM5 124 aa14.28□□□□□ -0.12
CSNK1E-203ENST00000396832 PSORS1C2Q9UIG4 136 aa14.26□□□□□ -0.13
CSNK1E-203ENST00000396832 WWC2-AS2Q96NR7 200 aa14.23□□□□□ -0.13
CSNK1E-203ENST00000396832 DYNC2H1Q8NCM8 4307 aaKnown RBP14.23□□□□□ -0.13
CSNK1E-203ENST00000396832 Q5W150 140 aa14.22□□□□□ -0.13
CSNK1E-203ENST00000396832 LINC00313P59037 77 aa14.21□□□□□ -0.13
CSNK1E-203ENST00000396832 LINC00483Q53H64 154 aa14.21□□□□□ -0.14
CSNK1E-203ENST00000396832 ACYP2P14621 99 aa14.17□□□□□ -0.14
CSNK1E-203ENST00000396832 PRAC1Q96KF2 57 aa14.16□□□□□ -0.14
CSNK1E-203ENST00000396832 DNAH17Q9UFH2 4485 aa14.15□□□□□ -0.14
CSNK1E-203ENST00000396832 A0A087WTM6 91 aa14.13□□□□□ -0.15
CSNK1E-203ENST00000396832 RTL8CO15255 209 aa14.13□□□□□ -0.15
CSNK1E-203ENST00000396832 DNAH2Q9P225 4427 aa14.13□□□□□ -0.15
CSNK1E-203ENST00000396832 KRTAP13-3Q3SY46 172 aa14.13□□□□□ -0.15
CSNK1E-203ENST00000396832 IGLV5-52A0A0A0MRZ9 124 aa14.12□□□□□ -0.15
CSNK1E-203ENST00000396832 FBN3Q75N90 2809 aa14.12□□□□□ -0.15
CSNK1E-203ENST00000396832 CIRBP-AS1Q8TBR5 109 aa14.12□□□□□ -0.15
CSNK1E-203ENST00000396832 ALMS1Q8TCU4 4167 aa14.1□□□□□ -0.15
CSNK1E-203ENST00000396832 RETNLBQ9BQ08 111 aa14.1□□□□□ -0.15
CSNK1E-203ENST00000396832 ZNF706Q9Y5V0 76 aaPredicted RBP14.09□□□□□ -0.15
CSNK1E-203ENST00000396832 ADM2Q7Z4H4 148 aa14.08□□□□□ -0.16
CSNK1E-203ENST00000396832 C8orf87E5RJ46 101 aa14.08□□□□□ -0.16
CSNK1E-203ENST00000396832 ZNF861PO60384 105 aa14.06□□□□□ -0.16
CSNK1E-203ENST00000396832 VPS13DQ5THJ4 4388 aa14.06□□□□□ -0.16
CSNK1E-203ENST00000396832 NUPR2A6NF83 97 aa14.04□□□□□ -0.16
CSNK1E-203ENST00000396832 DNAH6Q9C0G6 4158 aa14.04□□□□□ -0.16
CSNK1E-203ENST00000396832 A0A1B0GU69 56 aa14.02□□□□□ -0.17
CSNK1E-203ENST00000396832 PLA2G1BP04054 148 aaKnown RBP14.02□□□□□ -0.17
CSNK1E-203ENST00000396832 DMAC1Q96GE9 116 aa14.01□□□□□ -0.17
CSNK1E-203ENST00000396832 SPATA8Q6RVD6 105 aa13.95□□□□□ -0.18
CSNK1E-203ENST00000396832 IGLV7-43P04211 117 aa13.88□□□□□ -0.19
CSNK1E-203ENST00000396832 LINC01554Q52M75 96 aa13.88□□□□□ -0.19
CSNK1E-203ENST00000396832 DNAH11Q96DT5 4516 aa13.87□□□□□ -0.19
CSNK1E-203ENST00000396832 MIR22HGQ0VDD5 57 aa13.87□□□□□ -0.19
CSNK1E-203ENST00000396832 UQCR11O14957 56 aa13.83□□□□□ -0.19
CSNK1E-203ENST00000396832 FAM229AH3BQW9 127 aa13.82□□□□□ -0.2
CSNK1E-203ENST00000396832 IGKV2-30P06310 120 aa13.79□□□□□ -0.2
CSNK1E-203ENST00000396832 C4orf48Q5BLP8 95 aa13.77□□□□□ -0.2
CSNK1E-203ENST00000396832 DNAH5Q8TE73 4624 aa13.74□□□□□ -0.21
CSNK1E-203ENST00000396832 C1orf134Q5TEV5 83 aa13.73□□□□□ -0.21
CSNK1E-203ENST00000396832 LY6G6CO95867 125 aa13.73□□□□□ -0.21
CSNK1E-203ENST00000396832 KRTAP10-2P60368 255 aa13.69□□□□□ -0.22
CSNK1E-203ENST00000396832 LRP1BQ9NZR2 4599 aa13.66□□□□□ -0.22
CSNK1E-203ENST00000396832 IGKV2D-30A0A075B6S6 120 aa13.66□□□□□ -0.22
CSNK1E-203ENST00000396832 SSBP3-AS1Q7Z2R9 100 aa13.66□□□□□ -0.22
CSNK1E-203ENST00000396832 KRTAP13-2Q52LG2 175 aa13.66□□□□□ -0.22
CSNK1E-203ENST00000396832 CSAG1Q6PB30 78 aa13.66□□□□□ -0.22
CSNK1E-203ENST00000396832 KRTAP16-1A8MUX0 517 aa13.55□□□□□ -0.24
CSNK1E-203ENST00000396832 VPS13BQ7Z7G8 4022 aa13.55□□□□□ -0.24
CSNK1E-203ENST00000396832 HYDINQ4G0P3 5121 aa13.52□□□□□ -0.24
CSNK1E-203ENST00000396832 SPINK1P00995 79 aa13.49□□□□□ -0.25
CSNK1E-203ENST00000396832 H3BS24 57 aa13.47□□□□□ -0.25
CSNK1E-203ENST00000396832 FAT2Q9NYQ8 4349 aa13.46□□□□□ -0.25
CSNK1E-203ENST00000396832 KRTAP10-1P60331 282 aa13.46□□□□□ -0.25
CSNK1E-203ENST00000396832 PKD1P98161 4303 aa13.4□□□□□ -0.26
CSNK1E-203ENST00000396832 Q8N1X5 172 aa13.4□□□□□ -0.26
CSNK1E-203ENST00000396832 KRTAP1-4P0C5Y4 121 aa13.37□□□□□ -0.27
CSNK1E-203ENST00000396832 PKHD1P08F94 4074 aa13.29□□□□□ -0.28
CSNK1E-203ENST00000396832 TYMSOSQ8TAI1 123 aa13.29□□□□□ -0.28
CSNK1E-203ENST00000396832 Q6ZSA8 131 aa13.27□□□□□ -0.28
CSNK1E-203ENST00000396832 H0YAA0 97 aa13.25□□□□□ -0.29
CSNK1E-203ENST00000396832 A8MUU9 505 aa13.24□□□□□ -0.29
CSNK1E-203ENST00000396832 LINC00304Q8N9R0 145 aa13.18□□□□□ -0.3
CSNK1E-203ENST00000396832 KRTAP25-1Q3LHN0 102 aa13.17□□□□□ -0.3
CSNK1E-203ENST00000396832 C9orf92A6NGG3 77 aa13.16□□□□□ -0.3
CSNK1E-203ENST00000396832 A0A1B0GU33 70 aa13.09□□□□□ -0.31
CSNK1E-203ENST00000396832 SMR3BP02814 79 aaPredicted RBP13.08□□□□□ -0.32
CSNK1E-203ENST00000396832 KRTAP21-3Q3LHN1 58 aa13.08□□□□□ -0.32
CSNK1E-203ENST00000396832 SACSQ9NZJ4 4579 aa13.06□□□□□ -0.32
CSNK1E-203ENST00000396832 ROMO1P60602 79 aa13.02□□□□□ -0.33
CSNK1E-203ENST00000396832 FAT1Q14517 4588 aa13□□□□□ -0.33
CSNK1E-203ENST00000396832 H1FX-AS1Q4G0G2 97 aa13□□□□□ -0.33
CSNK1E-203ENST00000396832 KMT2CQ8NEZ4 4911 aaKnown RBP12.99□□□□□ -0.33
CSNK1E-203ENST00000396832 FLG2Q5D862 2391 aaPredicted RBP12.97□□□□□ -0.33
CSNK1E-203ENST00000396832 KRTAP3-1Q9BYR8 98 aa12.94□□□□□ -0.34
CSNK1E-203ENST00000396832 CRIPTQ9P021 101 aa12.92□□□□□ -0.34
CSNK1E-203ENST00000396832 DYNC1H1Q14204 4646 aaKnown RBP12.82□□□□□ -0.36
CSNK1E-203ENST00000396832 K7ERS5 55 aa12.81□□□□□ -0.36
CSNK1E-203ENST00000396832 COX6B2Q6YFQ2 88 aa12.75□□□□□ -0.37
CSNK1E-203ENST00000396832 C20orf166-AS1Q96NR2 134 aa12.74□□□□□ -0.37
CSNK1E-203ENST00000396832 DMBT1Q9UGM3 2413 aaPredicted RBP12.72□□□□□ -0.37
CSNK1E-203ENST00000396832 RYR2Q92736 4967 aa12.71□□□□□ -0.38
CSNK1E-203ENST00000396832 RPS29P62273 56 aaKnown RBP12.7□□□□□ -0.38
CSNK1E-203ENST00000396832 P0C880 135 aa12.67□□□□□ -0.38
CSNK1E-203ENST00000396832 PKHD1L1Q86WI1 4243 aa12.64□□□□□ -0.39
CSNK1E-203ENST00000396832 APOBP04114 4563 aaKnown RBP12.62□□□□□ -0.39
CSNK1E-203ENST00000396832 RYR3Q15413 4870 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms