RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 LINC00483Q53H64 154 aa3.95□□□□□ -1.78
BDNF-203ENST00000395978 Q96NJ1 140 aa3.95□□□□□ -1.78
BDNF-203ENST00000395978 KTN1-AS1Q86SY8 53 aa3.95□□□□□ -1.78
BDNF-203ENST00000395978 KRTAP29-1A8MX34 341 aaPredicted RBP3.95□□□□□ -1.78
BDNF-203ENST00000395978 SPINK1P00995 79 aa3.94□□□□□ -1.78
BDNF-203ENST00000395978 PKD1L1Q8TDX9 2849 aa3.94□□□□□ -1.78
BDNF-203ENST00000395978 LINC00304Q8N9R0 145 aa3.94□□□□□ -1.78
BDNF-203ENST00000395978 IGLV7-46A0A075B6I9 117 aa3.93□□□□□ -1.78
BDNF-203ENST00000395978 C7orf65Q6ZTY9 151 aa3.93□□□□□ -1.78
BDNF-203ENST00000395978 SMR3BP02814 79 aaPredicted RBP3.93□□□□□ -1.78
BDNF-203ENST00000395978 KRTAP13-1Q8IUC0 172 aa3.92□□□□□ -1.78
BDNF-203ENST00000395978 KRTAP10-2P60368 255 aa3.92□□□□□ -1.78
BDNF-203ENST00000395978 Q1T7F1 81 aa3.92□□□□□ -1.78
BDNF-203ENST00000395978 ZCCHC13Q8WW36 166 aaKnown RBP3.92□□□□□ -1.78
BDNF-203ENST00000395978 A0A1B0GU69 56 aa3.92□□□□□ -1.78
BDNF-203ENST00000395978 DNAH7Q8WXX0 4024 aa3.9□□□□□ -1.78
BDNF-203ENST00000395978 LCE6AA0A183 80 aa3.9□□□□□ -1.79
BDNF-203ENST00000395978 KRTAP10-1P60331 282 aa3.89□□□□□ -1.79
BDNF-203ENST00000395978 TENM2Q9NT68 2774 aa3.87□□□□□ -1.79
BDNF-203ENST00000395978 LCA10Q71F78 164 aa3.87□□□□□ -1.79
BDNF-203ENST00000395978 Q8N9P0 234 aaPredicted RBP3.87□□□□□ -1.79
BDNF-203ENST00000395978 K7ERS5 55 aa3.86□□□□□ -1.79
BDNF-203ENST00000395978 HRES1P13985 223 aa3.86□□□□□ -1.79
BDNF-203ENST00000395978 ADM2Q7Z4H4 148 aa3.86□□□□□ -1.79
BDNF-203ENST00000395978 TGP01266 2768 aa3.85□□□□□ -1.79
BDNF-203ENST00000395978 Q75L30 129 aa3.85□□□□□ -1.79
BDNF-203ENST00000395978 C9orf92A6NGG3 77 aa3.85□□□□□ -1.79
BDNF-203ENST00000395978 A8MU10 97 aa3.85□□□□□ -1.79
BDNF-203ENST00000395978 A0A087X002 238 aa3.84□□□□□ -1.79
BDNF-203ENST00000395978 NOTCH2NLQ7Z3S9 236 aa3.84□□□□□ -1.79
BDNF-203ENST00000395978 PRAC1Q96KF2 57 aa3.84□□□□□ -1.79
BDNF-203ENST00000395978 LINC01554Q52M75 96 aa3.84□□□□□ -1.79
BDNF-203ENST00000395978 Q5W150 140 aa3.83□□□□□ -1.8
BDNF-203ENST00000395978 DYNC2H1Q8NCM8 4307 aaKnown RBP3.83□□□□□ -1.8
BDNF-203ENST00000395978 ATP11AUNQ6ZP68 121 aa3.83□□□□□ -1.8
BDNF-203ENST00000395978 UQCR11O14957 56 aa3.82□□□□□ -1.8
BDNF-203ENST00000395978 ASB16-AS1Q495Z4 193 aa3.82□□□□□ -1.8
BDNF-203ENST00000395978 LINC01558Q9Y6Z2 57 aa3.82□□□□□ -1.8
BDNF-203ENST00000395978 DMBT1Q9UGM3 2413 aaPredicted RBP3.81□□□□□ -1.8
BDNF-203ENST00000395978 Q5VV11 94 aa3.8□□□□□ -1.8
BDNF-203ENST00000395978 Q8N1X5 172 aa3.8□□□□□ -1.8
BDNF-203ENST00000395978 CDC42SE1Q9NRR8 79 aa3.8□□□□□ -1.8
BDNF-203ENST00000395978 PRKDCP78527 4128 aaKnown RBP3.8□□□□□ -1.8
BDNF-203ENST00000395978 LCE2DQ5TA82 110 aaPredicted RBP3.79□□□□□ -1.8
BDNF-203ENST00000395978 KRTAP13-2Q52LG2 175 aa3.78□□□□□ -1.8
BDNF-203ENST00000395978 MIR22HGQ0VDD5 57 aa3.78□□□□□ -1.81
BDNF-203ENST00000395978 DNAH9Q9NYC9 4486 aa3.76□□□□□ -1.81
BDNF-203ENST00000395978 DMAC1Q96GE9 116 aa3.76□□□□□ -1.81
BDNF-203ENST00000395978 Q6ZSA8 131 aa3.76□□□□□ -1.81
BDNF-203ENST00000395978 FRAS1Q86XX4 4008 aa3.75□□□□□ -1.81
BDNF-203ENST00000395978 FBN3Q75N90 2809 aa3.74□□□□□ -1.81
BDNF-203ENST00000395978 SRRM2Q9UQ35 2752 aaKnown RBP3.74□□□□□ -1.81
BDNF-203ENST00000395978 SEC61BP60468 96 aaKnown RBP3.73□□□□□ -1.81
BDNF-203ENST00000395978 MEGF8Q7Z7M0 2845 aa3.72□□□□□ -1.81
BDNF-203ENST00000395978 KRTAP16-1A8MUX0 517 aa3.72□□□□□ -1.81
BDNF-203ENST00000395978 SPINK7P58062 85 aa3.72□□□□□ -1.81
BDNF-203ENST00000395978 RPS29P62273 56 aaKnown RBP3.71□□□□□ -1.81
BDNF-203ENST00000395978 DNHD1Q96M86 4753 aa3.7□□□□□ -1.82
BDNF-203ENST00000395978 HUWE1Q7Z6Z7 4374 aaKnown RBP3.7□□□□□ -1.82
BDNF-203ENST00000395978 KRTAP1-4P0C5Y4 121 aa3.7□□□□□ -1.82
BDNF-203ENST00000395978 FLG2Q5D862 2391 aaPredicted RBP3.7□□□□□ -1.82
BDNF-203ENST00000395978 HECTD4Q9Y4D8 3996 aa3.68□□□□□ -1.82
BDNF-203ENST00000395978 DNAH6Q9C0G6 4158 aa3.68□□□□□ -1.82
BDNF-203ENST00000395978 DNAH10Q8IVF4 4471 aa3.68□□□□□ -1.82
BDNF-203ENST00000395978 COL7A1Q02388 2944 aa3.68□□□□□ -1.82
BDNF-203ENST00000395978 Q5VSD8 79 aa3.67□□□□□ -1.82
BDNF-203ENST00000395978 A0A1B0GU33 70 aa3.66□□□□□ -1.82
BDNF-203ENST00000395978 LUZP6Q538Z0 58 aa3.66□□□□□ -1.82
BDNF-203ENST00000395978 A6NN06 94 aa3.63□□□□□ -1.83
BDNF-203ENST00000395978 DNAH2Q9P225 4427 aa3.63□□□□□ -1.83
BDNF-203ENST00000395978 COX6B2Q6YFQ2 88 aa3.62□□□□□ -1.83
BDNF-203ENST00000395978 VPS13DQ5THJ4 4388 aa3.62□□□□□ -1.83
BDNF-203ENST00000395978 A8MUU9 505 aa3.6□□□□□ -1.83
BDNF-203ENST00000395978 KRTAP3-3Q9BYR6 98 aa3.6□□□□□ -1.83
BDNF-203ENST00000395978 KRTAP3-2Q9BYR7 98 aa3.6□□□□□ -1.83
BDNF-203ENST00000395978 KRTAP13-3Q3SY46 172 aa3.6□□□□□ -1.83
BDNF-203ENST00000395978 SPATA8Q6RVD6 105 aa3.6□□□□□ -1.83
BDNF-203ENST00000395978 C20orf166-AS1Q96NR2 134 aa3.6□□□□□ -1.83
BDNF-203ENST00000395978 A0A0D9SG42 100 aa3.59□□□□□ -1.84
BDNF-203ENST00000395978 CSAG1Q6PB30 78 aa3.59□□□□□ -1.84
BDNF-203ENST00000395978 PKD1P98161 4303 aa3.58□□□□□ -1.84
BDNF-203ENST00000395978 S4R3F8 94 aa3.57□□□□□ -1.84
BDNF-203ENST00000395978 ALMS1Q8TCU4 4167 aa3.57□□□□□ -1.84
BDNF-203ENST00000395978 FAT2Q9NYQ8 4349 aa3.57□□□□□ -1.84
BDNF-203ENST00000395978 H1FX-AS1Q4G0G2 97 aa3.55□□□□□ -1.84
BDNF-203ENST00000395978 NDUFAF8A1L188 74 aa3.55□□□□□ -1.84
BDNF-203ENST00000395978 KMT2AQ03164 3969 aa3.54□□□□□ -1.84
BDNF-203ENST00000395978 VPS13BQ7Z7G8 4022 aa3.54□□□□□ -1.84
BDNF-203ENST00000395978 ROMO1P60602 79 aa3.53□□□□□ -1.84
BDNF-203ENST00000395978 RPL37P61927 97 aaKnown RBP3.53□□□□□ -1.84
BDNF-203ENST00000395978 SPINT4Q6UDR6 99 aa3.53□□□□□ -1.84
BDNF-203ENST00000395978 A0A1B0GVY2 172 aa3.53□□□□□ -1.85
BDNF-203ENST00000395978 STARD9Q9P2P6 4700 aa3.52□□□□□ -1.85
BDNF-203ENST00000395978 PLECQ15149 4684 aaKnown RBP3.52□□□□□ -1.85
BDNF-203ENST00000395978 DNAH8Q96JB1 4490 aa3.52□□□□□ -1.85
BDNF-203ENST00000395978 CRIPTQ9P021 101 aa3.51□□□□□ -1.85
BDNF-203ENST00000395978 DNAH11Q96DT5 4516 aa3.5□□□□□ -1.85
BDNF-203ENST00000395978 HYDINQ4G0P3 5121 aa3.49□□□□□ -1.85
BDNF-203ENST00000395978 DNAH17Q9UFH2 4485 aa3.49□□□□□ -1.85
BDNF-203ENST00000395978 PKHD1P08F94 4074 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms