RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 KRTAP4-16G5E9R7 235 aaPredicted RBP5.61□□□□□ -1.51
RAE1-202ENST00000395840 DNAH2Q9P225 4427 aa5.61□□□□□ -1.51
RAE1-202ENST00000395840 KRTAP3-3Q9BYR6 98 aa5.61□□□□□ -1.51
RAE1-202ENST00000395840 KRTAP3-2Q9BYR7 98 aa5.61□□□□□ -1.51
RAE1-202ENST00000395840 FRAS1Q86XX4 4008 aa5.61□□□□□ -1.51
RAE1-202ENST00000395840 HRES1P13985 223 aa5.6□□□□□ -1.51
RAE1-202ENST00000395840 C15orf56Q8N910 161 aa5.6□□□□□ -1.51
RAE1-202ENST00000395840 A0A1B0GVY2 172 aa5.59□□□□□ -1.51
RAE1-202ENST00000395840 KRTAP26-1Q6PEX3 210 aa5.57□□□□□ -1.52
RAE1-202ENST00000395840 RETNLBQ9BQ08 111 aa5.57□□□□□ -1.52
RAE1-202ENST00000395840 SPRR1AP35321 89 aa5.57□□□□□ -1.52
RAE1-202ENST00000395840 FAM168BA1KXE4 195 aa5.56□□□□□ -1.52
RAE1-202ENST00000395840 A8MWP4 228 aa5.56□□□□□ -1.52
RAE1-202ENST00000395840 ASB16-AS1Q495Z4 193 aa5.56□□□□□ -1.52
RAE1-202ENST00000395840 IGLV5-52A0A0A0MRZ9 124 aa5.55□□□□□ -1.52
RAE1-202ENST00000395840 FAT2Q9NYQ8 4349 aa5.55□□□□□ -1.52
RAE1-202ENST00000395840 CSAG1Q6PB30 78 aa5.54□□□□□ -1.52
RAE1-202ENST00000395840 H0Y9J4 135 aa5.53□□□□□ -1.52
RAE1-202ENST00000395840 HECTD4Q9Y4D8 3996 aa5.53□□□□□ -1.52
RAE1-202ENST00000395840 MMP24-AS1A0A0U1RRL7 71 aa5.53□□□□□ -1.52
RAE1-202ENST00000395840 PKD1P98161 4303 aa5.53□□□□□ -1.52
RAE1-202ENST00000395840 IGKV2-24A0A0C4DH68 120 aa5.52□□□□□ -1.53
RAE1-202ENST00000395840 PLA2G2DQ9UNK4 145 aa5.52□□□□□ -1.53
RAE1-202ENST00000395840 KRTAP10-2P60368 255 aa5.51□□□□□ -1.53
RAE1-202ENST00000395840 LINC00472Q9H8W2 130 aa5.51□□□□□ -1.53
RAE1-202ENST00000395840 KRTAP7-1Q8IUC3 87 aa5.5□□□□□ -1.53
RAE1-202ENST00000395840 IGLV8-61A0A075B6I0 122 aa5.49□□□□□ -1.53
RAE1-202ENST00000395840 A0A087X002 238 aa5.49□□□□□ -1.53
RAE1-202ENST00000395840 TLX1NBP0CAT3 122 aa5.49□□□□□ -1.53
RAE1-202ENST00000395840 DNAH11Q96DT5 4516 aa5.49□□□□□ -1.53
RAE1-202ENST00000395840 CDK2AP2O75956 126 aa5.48□□□□□ -1.53
RAE1-202ENST00000395840 TP53AIP1Q9HCN2 124 aa5.48□□□□□ -1.53
RAE1-202ENST00000395840 ZNF706Q9Y5V0 76 aaPredicted RBP5.48□□□□□ -1.53
RAE1-202ENST00000395840 REG3GQ6UW15 175 aa5.48□□□□□ -1.53
RAE1-202ENST00000395840 SPATA8Q6RVD6 105 aa5.47□□□□□ -1.53
RAE1-202ENST00000395840 SRRM2Q9UQ35 2752 aaKnown RBP5.47□□□□□ -1.53
RAE1-202ENST00000395840 PRLHP81277 87 aa5.46□□□□□ -1.54
RAE1-202ENST00000395840 KRTAP10-1P60331 282 aa5.44□□□□□ -1.54
RAE1-202ENST00000395840 A0A1B0GU69 56 aa5.44□□□□□ -1.54
RAE1-202ENST00000395840 DYNC1H1Q14204 4646 aaKnown RBP5.44□□□□□ -1.54
RAE1-202ENST00000395840 MIR22HGQ0VDD5 57 aa5.44□□□□□ -1.54
RAE1-202ENST00000395840 Q6ZSA8 131 aa5.44□□□□□ -1.54
RAE1-202ENST00000395840 PKHD1P08F94 4074 aa5.43□□□□□ -1.54
RAE1-202ENST00000395840 A0A096LNI7 61 aa5.42□□□□□ -1.54
RAE1-202ENST00000395840 EPPK1P58107 5090 aaKnown RBP5.41□□□□□ -1.54
RAE1-202ENST00000395840 C8orf17Q9NRJ1 99 aa5.41□□□□□ -1.54
RAE1-202ENST00000395840 DNAH5Q8TE73 4624 aa5.4□□□□□ -1.54
RAE1-202ENST00000395840 ACYP2P14621 99 aa5.4□□□□□ -1.54
RAE1-202ENST00000395840 UQCR11O14957 56 aa5.4□□□□□ -1.55
RAE1-202ENST00000395840 SPACA4Q8TDM5 124 aa5.39□□□□□ -1.55
RAE1-202ENST00000395840 BIRC6Q9NR09 4857 aa5.39□□□□□ -1.55
RAE1-202ENST00000395840 FAM229AH3BQW9 127 aa5.38□□□□□ -1.55
RAE1-202ENST00000395840 LRP1BQ9NZR2 4599 aa5.38□□□□□ -1.55
RAE1-202ENST00000395840 IGHV6-1A0A0B4J1U7 121 aa5.37□□□□□ -1.55
RAE1-202ENST00000395840 ZNF861PO60384 105 aa5.37□□□□□ -1.55
RAE1-202ENST00000395840 ROMO1P60602 79 aa5.37□□□□□ -1.55
RAE1-202ENST00000395840 DNAH8Q96JB1 4490 aa5.37□□□□□ -1.55
RAE1-202ENST00000395840 CIRBP-AS1Q8TBR5 109 aa5.36□□□□□ -1.55
RAE1-202ENST00000395840 Q96NJ1 140 aa5.36□□□□□ -1.55
RAE1-202ENST00000395840 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.36□□□□□ -1.55
RAE1-202ENST00000395840 Q8N1X5 172 aa5.35□□□□□ -1.55
RAE1-202ENST00000395840 MRPL34Q9BQ48 92 aaKnown RBP5.35□□□□□ -1.55
RAE1-202ENST00000395840 A0A0A0MQY5 61 aa5.34□□□□□ -1.55
RAE1-202ENST00000395840 CHTF8P0CG12 524 aa5.34□□□□□ -1.55
RAE1-202ENST00000395840 APOBP04114 4563 aaKnown RBP5.33□□□□□ -1.56
RAE1-202ENST00000395840 A0A1B0GVX0 72 aa5.33□□□□□ -1.56
RAE1-202ENST00000395840 SPRR1BP22528 89 aa5.33□□□□□ -1.56
RAE1-202ENST00000395840 Q5W150 140 aa5.32□□□□□ -1.56
RAE1-202ENST00000395840 PANO1I0J062 215 aa5.32□□□□□ -1.56
RAE1-202ENST00000395840 NOTCH2NLQ7Z3S9 236 aa5.32□□□□□ -1.56
RAE1-202ENST00000395840 DMAC1Q96GE9 116 aa5.31□□□□□ -1.56
RAE1-202ENST00000395840 KRTAP25-1Q3LHN0 102 aa5.3□□□□□ -1.56
RAE1-202ENST00000395840 Q5VSD8 79 aa5.3□□□□□ -1.56
RAE1-202ENST00000395840 SMR3BP02814 79 aaPredicted RBP5.29□□□□□ -1.56
RAE1-202ENST00000395840 HSPG2P98160 4391 aa5.29□□□□□ -1.56
RAE1-202ENST00000395840 RYR1P21817 5038 aa5.29□□□□□ -1.56
RAE1-202ENST00000395840 KRTAP11-1Q8IUC1 163 aa5.28□□□□□ -1.56
RAE1-202ENST00000395840 KRTAP13-3Q3SY46 172 aa5.27□□□□□ -1.57
RAE1-202ENST00000395840 IGLV9-49A0A0B4J1Y8 123 aa5.27□□□□□ -1.57
RAE1-202ENST00000395840 HERC2O95714 4834 aa5.26□□□□□ -1.57
RAE1-202ENST00000395840 KIAA1109Q2LD37 5005 aa5.26□□□□□ -1.57
RAE1-202ENST00000395840 P0C880 135 aa5.25□□□□□ -1.57
RAE1-202ENST00000395840 VPS13BQ7Z7G8 4022 aa5.24□□□□□ -1.57
RAE1-202ENST00000395840 PSORS1C2Q9UIG4 136 aa5.23□□□□□ -1.57
RAE1-202ENST00000395840 IGLV7-43P04211 117 aa5.22□□□□□ -1.57
RAE1-202ENST00000395840 SPINK6Q6UWN8 80 aa5.22□□□□□ -1.57
RAE1-202ENST00000395840 A8MUU9 505 aa5.21□□□□□ -1.58
RAE1-202ENST00000395840 KRTAP10-4P60372 401 aaPredicted RBP5.21□□□□□ -1.58
RAE1-202ENST00000395840 LINC00304Q8N9R0 145 aa5.2□□□□□ -1.58
RAE1-202ENST00000395840 FLG2Q5D862 2391 aaPredicted RBP5.2□□□□□ -1.58
RAE1-202ENST00000395840 FAT1Q14517 4588 aa5.18□□□□□ -1.58
RAE1-202ENST00000395840 KRTAP17-1Q9BYP8 105 aa5.17□□□□□ -1.58
RAE1-202ENST00000395840 KRTAP4-5Q9BYR2 181 aa5.17□□□□□ -1.58
RAE1-202ENST00000395840 CRIPTQ9P021 101 aa5.16□□□□□ -1.58
RAE1-202ENST00000395840 LINC00483Q53H64 154 aa5.16□□□□□ -1.58
RAE1-202ENST00000395840 KRTAP13-1Q8IUC0 172 aa5.15□□□□□ -1.58
RAE1-202ENST00000395840 PKHD1L1Q86WI1 4243 aa5.15□□□□□ -1.59
RAE1-202ENST00000395840 IGKV2-30P06310 120 aa5.13□□□□□ -1.59
RAE1-202ENST00000395840 H0YAA0 97 aa5.13□□□□□ -1.59
RAE1-202ENST00000395840 SPINK1P00995 79 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms