RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 Q8N8P6 123 aa2.64□□□□□ -1.99
AP3S1-202ENST00000395548 OR10AG1Q8NH19 301 aa2.64□□□□□ -1.99
AP3S1-202ENST00000395548 PPDPFLQ8WWR9 84 aa2.64□□□□□ -1.99
AP3S1-202ENST00000395548 TMEM141Q96I45 108 aa2.64□□□□□ -1.99
AP3S1-202ENST00000395548 VAMP8Q9BV40 100 aa2.64□□□□□ -1.99
AP3S1-202ENST00000395548 Q1T7F1 81 aa2.63□□□□□ -1.99
AP3S1-202ENST00000395548 S100A7L2Q5SY68 101 aa2.63□□□□□ -1.99
AP3S1-202ENST00000395548 SPRR5A0A1B0GTR4 108 aa2.62□□□□□ -1.99
AP3S1-202ENST00000395548 UBE2L5PA0A1B0GUS4 154 aa2.62□□□□□ -1.99
AP3S1-202ENST00000395548 F8W1H4 67 aa2.62□□□□□ -1.99
AP3S1-202ENST00000395548 COX7CP15954 63 aa2.62□□□□□ -1.99
AP3S1-202ENST00000395548 UBE2L3P68036 154 aaKnown RBP2.62□□□□□ -1.99
AP3S1-202ENST00000395548 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.62□□□□□ -1.99
AP3S1-202ENST00000395548 C5orf38Q86SI9 138 aa2.62□□□□□ -1.99
AP3S1-202ENST00000395548 SPRR2FQ96RM1 72 aa2.62□□□□□ -1.99
AP3S1-202ENST00000395548 NMES1Q9C002 83 aa2.62□□□□□ -1.99
AP3S1-202ENST00000395548 C9orf92A6NGG3 77 aa2.61□□□□□ -1.99
AP3S1-202ENST00000395548 SSSCA1O60232 199 aa2.61□□□□□ -1.99
AP3S1-202ENST00000395548 ZNF56Q15929 161 aa2.61□□□□□ -1.99
AP3S1-202ENST00000395548 IGFL1Q6UW32 110 aa2.61□□□□□ -1.99
AP3S1-202ENST00000395548 S100A16Q96FQ6 103 aaKnown RBP2.61□□□□□ -1.99
AP3S1-202ENST00000395548 MRPL35Q9NZE8 188 aaKnown RBP2.61□□□□□ -1.99
AP3S1-202ENST00000395548 ORMDL1Q9P0S3 153 aa2.61□□□□□ -1.99
AP3S1-202ENST00000395548 AHNAK2Q8IVF2 5795 aa2.61□□□□□ -1.99
AP3S1-202ENST00000395548 DSTQ03001 7570 aaKnown RBP2.6□□□□□ -1.99
AP3S1-202ENST00000395548 SDHAF1A6NFY7 115 aa2.6□□□□□ -1.99
AP3S1-202ENST00000395548 SLC25A6P12236 298 aa2.6□□□□□ -1.99
AP3S1-202ENST00000395548 IL7P13232 177 aa2.6□□□□□ -1.99
AP3S1-202ENST00000395548 RBM3P98179 157 aaKnown RBP2.6□□□□□ -1.99
AP3S1-202ENST00000395548 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
AP3S1-202ENST00000395548 H3BVH4 76 aa2.59□□□□□ -1.99
AP3S1-202ENST00000395548 RPL37P61927 97 aaKnown RBP2.59□□□□□ -1.99
AP3S1-202ENST00000395548 UBE2G1P62253 170 aa2.59□□□□□ -1.99
AP3S1-202ENST00000395548 FAM74A1Q5RGS3 127 aa2.59□□□□□ -1.99
AP3S1-202ENST00000395548 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -1.99
AP3S1-202ENST00000395548 LINC00959A0A1B0GUT2 108 aa2.58□□□□□ -2
AP3S1-202ENST00000395548 H3BRM9 83 aa2.58□□□□□ -2
AP3S1-202ENST00000395548 MT-ATP8P03928 68 aa2.58□□□□□ -2
AP3S1-202ENST00000395548 ARMS2P0C7Q2 107 aa2.58□□□□□ -2
AP3S1-202ENST00000395548 MGST2Q99735 147 aa2.58□□□□□ -2
AP3S1-202ENST00000395548 C22orf24Q9Y442 160 aa2.58□□□□□ -2
AP3S1-202ENST00000395548 NDUFA1O15239 70 aa2.57□□□□□ -2
AP3S1-202ENST00000395548 IGKCP01834 107 aa2.57□□□□□ -2
AP3S1-202ENST00000395548 KRTAP13-1Q8IUC0 172 aa2.57□□□□□ -2
AP3S1-202ENST00000395548 PSENENQ9NZ42 101 aa2.57□□□□□ -2
AP3S1-202ENST00000395548 TRBV10-3A0A0K0K1G6 114 aa2.56□□□□□ -2
AP3S1-202ENST00000395548 SPAG11BQ08648 103 aa2.56□□□□□ -2
AP3S1-202ENST00000395548 SPTSSBQ8NFR3 76 aa2.56□□□□□ -2
AP3S1-202ENST00000395548 PRO1933Q9H354 126 aa2.56□□□□□ -2
AP3S1-202ENST00000395548 LINC00299Q6ZSB3 139 aa2.55□□□□□ -2
AP3S1-202ENST00000395548 SMIM31A0A1B0GVY4 71 aa2.54□□□□□ -2
AP3S1-202ENST00000395548 PYY3Q5JQD4 70 aa2.54□□□□□ -2
AP3S1-202ENST00000395548 CSAG1Q6PB30 78 aa2.54□□□□□ -2
AP3S1-202ENST00000395548 FAM167A-AS1Q96KT0 104 aa2.54□□□□□ -2
AP3S1-202ENST00000395548 TRAV13-2A0A0B4J235 113 aa2.53□□□□□ -2
AP3S1-202ENST00000395548 KRTDAPP60985 99 aa2.53□□□□□ -2
AP3S1-202ENST00000395548 PMCHL2Q9BQD1 86 aa2.53□□□□□ -2
AP3S1-202ENST00000395548 CCKP06307 115 aa2.52□□□□□ -2.01
AP3S1-202ENST00000395548 DMAC1Q96GE9 116 aa2.52□□□□□ -2.01
AP3S1-202ENST00000395548 CDC42SE1Q9NRR8 79 aa2.52□□□□□ -2.01
AP3S1-202ENST00000395548 C6orf48Q9UBA6 75 aa2.52□□□□□ -2.01
AP3S1-202ENST00000395548 HMCN1Q96RW7 5635 aa2.51□□□□□ -2.01
AP3S1-202ENST00000395548 FXYD6-FXYD2A0A087WZ82 144 aa2.51□□□□□ -2.01
AP3S1-202ENST00000395548 TRBV30A0A0K0K1B3 111 aa2.51□□□□□ -2.01
AP3S1-202ENST00000395548 UNQ6190/PRO20217Q6UXQ8 127 aa2.51□□□□□ -2.01
AP3S1-202ENST00000395548 SSBP3-AS1Q7Z2R9 100 aa2.51□□□□□ -2.01
AP3S1-202ENST00000395548 IFI27L1Q96BM0 104 aa2.51□□□□□ -2.01
AP3S1-202ENST00000395548 LIMD2Q9BT23 127 aa2.51□□□□□ -2.01
AP3S1-202ENST00000395548 NAP1L6A6NFF2 107 aa2.5□□□□□ -2.01
AP3S1-202ENST00000395548 HCG22E2RYF7 251 aa2.5□□□□□ -2.01
AP3S1-202ENST00000395548 M0QY20 66 aa2.5□□□□□ -2.01
AP3S1-202ENST00000395548 PRLHP81277 87 aa2.5□□□□□ -2.01
AP3S1-202ENST00000395548 SPRR4Q96PI1 79 aa2.5□□□□□ -2.01
AP3S1-202ENST00000395548 ARL2-SNX15V9GYD0 113 aa2.5□□□□□ -2.01
AP3S1-202ENST00000395548 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.49□□□□□ -2.01
AP3S1-202ENST00000395548 IGKV2-29A2NJV5 120 aaPredicted RBP2.49□□□□□ -2.01
AP3S1-202ENST00000395548 JMJD7-PLA2G4BH0Y9G9 81 aa2.49□□□□□ -2.01
AP3S1-202ENST00000395548 COA5Q86WW8 74 aa2.49□□□□□ -2.01
AP3S1-202ENST00000395548 CYP4F30PQ9H0H9 118 aa2.49□□□□□ -2.01
AP3S1-202ENST00000395548 hADV29S1A0JD25 119 aa2.48□□□□□ -2.01
AP3S1-202ENST00000395548 ATOX1O00244 68 aa2.48□□□□□ -2.01
AP3S1-202ENST00000395548 TRAV23DV6A0A075B6W5 121 aa2.47□□□□□ -2.01
AP3S1-202ENST00000395548 TRBV6-5A0A0K0K1A5 114 aa2.47□□□□□ -2.01
AP3S1-202ENST00000395548 SIX6O95475 246 aa2.47□□□□□ -2.01
AP3S1-202ENST00000395548 DNAL4O96015 105 aa2.47□□□□□ -2.01
AP3S1-202ENST00000395548 CDC42SE2Q9NRR3 84 aa2.47□□□□□ -2.01
AP3S1-202ENST00000395548 K7EP34 96 aa2.46□□□□□ -2.02
AP3S1-202ENST00000395548 MGPP08493 103 aa2.46□□□□□ -2.02
AP3S1-202ENST00000395548 SEC11AP67812 179 aa2.46□□□□□ -2.02
AP3S1-202ENST00000395548 PDE6GP18545 87 aa2.45□□□□□ -2.02
AP3S1-202ENST00000395548 PEA15Q15121 130 aa2.45□□□□□ -2.02
AP3S1-202ENST00000395548 HIGD1CA8MV81 97 aa2.44□□□□□ -2.02
AP3S1-202ENST00000395548 FAUP35544 74 aaKnown RBP2.44□□□□□ -2.02
AP3S1-202ENST00000395548 SSBP1Q04837 148 aaKnown RBP2.44□□□□□ -2.02
AP3S1-202ENST00000395548 FAM213BQ8TBF2 198 aa2.44□□□□□ -2.02
AP3S1-202ENST00000395548 TRBV7-7A0A0K0K1E9 115 aa2.43□□□□□ -2.02
AP3S1-202ENST00000395548 NDUFC1O43677 76 aa2.43□□□□□ -2.02
AP3S1-202ENST00000395548 SFT2D2O95562 160 aa2.43□□□□□ -2.02
AP3S1-202ENST00000395548 CRIP1P50238 77 aa2.42□□□□□ -2.02
AP3S1-202ENST00000395548 Q86TA4 180 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 280.5 ms