RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 Q8N9L7 120 aa2.42□□□□□ -2.02
HERC4-204ENST00000395198 KCNQ1DNQ9H478 68 aa2.41□□□□□ -2.02
HERC4-204ENST00000395198 DNAH1Q9P2D7 4330 aa2.41□□□□□ -2.02
HERC4-204ENST00000395198 LINC01556Q5JQF7 62 aa2.41□□□□□ -2.02
HERC4-204ENST00000395198 SPINK6Q6UWN8 80 aa2.41□□□□□ -2.02
HERC4-204ENST00000395198 CNFNQ9BYD5 112 aa2.41□□□□□ -2.02
HERC4-204ENST00000395198 Q8IZM0 81 aa2.4□□□□□ -2.03
HERC4-204ENST00000395198 CRYBG3Q68DQ2 2970 aa2.39□□□□□ -2.03
HERC4-204ENST00000395198 H3BNG1 76 aa2.39□□□□□ -2.03
HERC4-204ENST00000395198 LINC00308Q8TCZ7 52 aa2.39□□□□□ -2.03
HERC4-204ENST00000395198 NBEAL2Q6ZNJ1 2754 aa2.38□□□□□ -2.03
HERC4-204ENST00000395198 A0A1W2PNN7 141 aa2.37□□□□□ -2.03
HERC4-204ENST00000395198 Q6ZQY7 126 aa2.37□□□□□ -2.03
HERC4-204ENST00000395198 COX17Q14061 63 aa2.37□□□□□ -2.03
HERC4-204ENST00000395198 RPL37AP61513 92 aaKnown RBP2.36□□□□□ -2.03
HERC4-204ENST00000395198 APCP25054 2843 aa2.36□□□□□ -2.03
HERC4-204ENST00000395198 A0A1B0GU69 56 aa2.36□□□□□ -2.03
HERC4-204ENST00000395198 KLK9Q2XQG4 91 aa2.36□□□□□ -2.03
HERC4-204ENST00000395198 PSORS1C2Q9UIG4 136 aa2.36□□□□□ -2.03
HERC4-204ENST00000395198 NIPBLQ6KC79 2804 aaeCLIP2.36□□□□□ -2.035e-6■■■■■ 32.2
HERC4-204ENST00000395198 HRES1P13985 223 aa2.36□□□□□ -2.03
HERC4-204ENST00000395198 PRKDCP78527 4128 aaKnown RBP2.35□□□□□ -2.03
HERC4-204ENST00000395198 IGLV6-57P01721 117 aa2.35□□□□□ -2.03
HERC4-204ENST00000395198 PRLHP81277 87 aa2.35□□□□□ -2.03
HERC4-204ENST00000395198 DNAH7Q8WXX0 4024 aa2.35□□□□□ -2.03
HERC4-204ENST00000395198 SMR3BP02814 79 aaPredicted RBP2.35□□□□□ -2.03
HERC4-204ENST00000395198 DNAH6Q9C0G6 4158 aa2.35□□□□□ -2.03
HERC4-204ENST00000395198 CELSR2Q9HCU4 2923 aa2.34□□□□□ -2.03
HERC4-204ENST00000395198 SMIM11BQ8TCY0 68 aa2.34□□□□□ -2.03
HERC4-204ENST00000395198 ASH1LQ9NR48 2969 aaKnown RBP2.34□□□□□ -2.04
HERC4-204ENST00000395198 ZANQ9Y493 2812 aa2.34□□□□□ -2.04
HERC4-204ENST00000395198 FLG2Q5D862 2391 aaPredicted RBP2.33□□□□□ -2.04
HERC4-204ENST00000395198 KRTAP7-1Q8IUC3 87 aa2.33□□□□□ -2.04
HERC4-204ENST00000395198 APLNQ9ULZ1 77 aa2.33□□□□□ -2.04
HERC4-204ENST00000395198 A8MTW9 85 aa2.32□□□□□ -2.04
HERC4-204ENST00000395198 KRTAP11-1Q8IUC1 163 aa2.32□□□□□ -2.04
HERC4-204ENST00000395198 C6orf48Q9UBA6 75 aa2.32□□□□□ -2.04
HERC4-204ENST00000395198 LRBAP50851 2863 aa2.32□□□□□ -2.04
HERC4-204ENST00000395198 CRIPTQ9P021 101 aa2.32□□□□□ -2.04
HERC4-204ENST00000395198 WFDC13Q8IUB5 93 aa2.3□□□□□ -2.04
HERC4-204ENST00000395198 GVQW2A0A096LPI5 108 aaPredicted RBP2.3□□□□□ -2.04
HERC4-204ENST00000395198 SSBP3-AS1Q7Z2R9 100 aa2.29□□□□□ -2.04
HERC4-204ENST00000395198 COL7A1Q02388 2944 aa2.29□□□□□ -2.04
HERC4-204ENST00000395198 ACYP2P14621 99 aa2.28□□□□□ -2.04
HERC4-204ENST00000395198 NF1P21359 2839 aa2.28□□□□□ -2.04
HERC4-204ENST00000395198 TENM3Q9P273 2699 aa2.28□□□□□ -2.04
HERC4-204ENST00000395198 OTOGQ6ZRI0 2925 aa2.28□□□□□ -2.04
HERC4-204ENST00000395198 DYNC2H1Q8NCM8 4307 aaKnown RBP2.28□□□□□ -2.04
HERC4-204ENST00000395198 COX6B2Q6YFQ2 88 aa2.27□□□□□ -2.05
HERC4-204ENST00000395198 PKD1L1Q8TDX9 2849 aa2.26□□□□□ -2.05
HERC4-204ENST00000395198 LINC00575Q6W349 94 aa2.26□□□□□ -2.05
HERC4-204ENST00000395198 FRAS1Q86XX4 4008 aa2.25□□□□□ -2.05
HERC4-204ENST00000395198 Q6ZRX8 168 aa2.25□□□□□ -2.05
HERC4-204ENST00000395198 TENM1Q9UKZ4 2725 aa2.25□□□□□ -2.05
HERC4-204ENST00000395198 HECTD4Q9Y4D8 3996 aa2.24□□□□□ -2.05
HERC4-204ENST00000395198 MXRA5Q9NR99 2828 aa2.24□□□□□ -2.05
HERC4-204ENST00000395198 ANAPC11Q9NYG5 84 aa2.23□□□□□ -2.05
HERC4-204ENST00000395198 TENM2Q9NT68 2774 aa2.23□□□□□ -2.05
HERC4-204ENST00000395198 VPS13DQ5THJ4 4388 aa2.23□□□□□ -2.05
HERC4-204ENST00000395198 FBN2P35556 2912 aa2.23□□□□□ -2.05
HERC4-204ENST00000395198 IGKV2D-30A0A075B6S6 120 aa2.23□□□□□ -2.05
HERC4-204ENST00000395198 IGKV2-30P06310 120 aa2.23□□□□□ -2.05
HERC4-204ENST00000395198 DSCR10P59022 87 aa2.22□□□□□ -2.05
HERC4-204ENST00000395198 Q6ZRN7 208 aaPredicted RBP2.22□□□□□ -2.05
HERC4-204ENST00000395198 IGFL1Q6UW32 110 aa2.22□□□□□ -2.05
HERC4-204ENST00000395198 KRTAP29-1A8MX34 341 aaPredicted RBP2.21□□□□□ -2.06
HERC4-204ENST00000395198 KRTAP1-5Q9BYS1 174 aa2.21□□□□□ -2.06
HERC4-204ENST00000395198 K7EQZ3 153 aa2.2□□□□□ -2.06
HERC4-204ENST00000395198 SPINK1P00995 79 aa2.2□□□□□ -2.06
HERC4-204ENST00000395198 KMT2AQ03164 3969 aa2.2□□□□□ -2.06
HERC4-204ENST00000395198 C9orf92A6NGG3 77 aa2.2□□□□□ -2.06
HERC4-204ENST00000395198 INE1O15225 51 aa2.2□□□□□ -2.06
HERC4-204ENST00000395198 Q5VSD8 79 aa2.2□□□□□ -2.06
HERC4-204ENST00000395198 PKHD1L1Q86WI1 4243 aa2.19□□□□□ -2.06
HERC4-204ENST00000395198 KRTAP10-2P60368 255 aa2.19□□□□□ -2.06
HERC4-204ENST00000395198 PCOTHQ58A44 107 aa2.19□□□□□ -2.06
HERC4-204ENST00000395198 HUWE1Q7Z6Z7 4374 aaKnown RBP2.19□□□□□ -2.06
HERC4-204ENST00000395198 H0YAA0 97 aa2.18□□□□□ -2.06
HERC4-204ENST00000395198 HRNRQ86YZ3 2850 aaPredicted RBP2.18□□□□□ -2.06
HERC4-204ENST00000395198 KRTAP10-1P60331 282 aa2.18□□□□□ -2.06
HERC4-204ENST00000395198 DNAH9Q9NYC9 4486 aa2.17□□□□□ -2.06
HERC4-204ENST00000395198 VWFP04275 2813 aa2.17□□□□□ -2.06
HERC4-204ENST00000395198 PLAC4Q8WY50 150 aa2.17□□□□□ -2.06
HERC4-204ENST00000395198 TGP01266 2768 aa2.16□□□□□ -2.06
HERC4-204ENST00000395198 C10orf95Q9H7T3 257 aa2.16□□□□□ -2.06
HERC4-204ENST00000395198 SRRM2Q9UQ35 2752 aaKnown RBP2.16□□□□□ -2.06
HERC4-204ENST00000395198 FAT2Q9NYQ8 4349 aa2.16□□□□□ -2.06
HERC4-204ENST00000395198 FBN1P35555 2871 aaKnown RBP2.15□□□□□ -2.07
HERC4-204ENST00000395198 VPS13BQ7Z7G8 4022 aa2.15□□□□□ -2.07
HERC4-204ENST00000395198 PDZD2O15018 2839 aa2.14□□□□□ -2.07
HERC4-204ENST00000395198 M0R2T5 61 aa2.14□□□□□ -2.07
HERC4-204ENST00000395198 PKHD1P08F94 4074 aa2.14□□□□□ -2.07
HERC4-204ENST00000395198 Q6ZSA8 131 aa2.14□□□□□ -2.07
HERC4-204ENST00000395198 TP53AIP1Q9HCN2 124 aa2.14□□□□□ -2.07
HERC4-204ENST00000395198 XP32Q5T750 250 aa2.14□□□□□ -2.07
HERC4-204ENST00000395198 MRPL34Q9BQ48 92 aaKnown RBP2.13□□□□□ -2.07
HERC4-204ENST00000395198 LCE5AQ5TCM9 118 aa2.13□□□□□ -2.07
HERC4-204ENST00000395198 DNAH17Q9UFH2 4485 aa2.13□□□□□ -2.07
HERC4-204ENST00000395198 FBN3Q75N90 2809 aa2.12□□□□□ -2.07
HERC4-204ENST00000395198 KRTAP13-2Q52LG2 175 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms