RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 A0A087X002 238 aa3.83□□□□□ -1.8
NXF3-201ENST00000395065 C8orf87E5RJ46 101 aa3.83□□□□□ -1.8
NXF3-201ENST00000395065 DYNC2H1Q8NCM8 4307 aaKnown RBP3.82□□□□□ -1.8
NXF3-201ENST00000395065 LINC00313P59037 77 aa3.82□□□□□ -1.8
NXF3-201ENST00000395065 RYR3Q15413 4870 aa3.81□□□□□ -1.8
NXF3-201ENST00000395065 PLECQ15149 4684 aaKnown RBP3.8□□□□□ -1.8
NXF3-201ENST00000395065 KRTAP13-1Q8IUC0 172 aa3.8□□□□□ -1.8
NXF3-201ENST00000395065 MRPL34Q9BQ48 92 aaKnown RBP3.8□□□□□ -1.8
NXF3-201ENST00000395065 ALMS1Q8TCU4 4167 aa3.8□□□□□ -1.8
NXF3-201ENST00000395065 A0A1B0GVX0 72 aa3.8□□□□□ -1.8
NXF3-201ENST00000395065 K7EIL1 84 aa3.8□□□□□ -1.8
NXF3-201ENST00000395065 PRR26Q8N8Z3 221 aa3.8□□□□□ -1.8
NXF3-201ENST00000395065 KRTAP13-3Q3SY46 172 aa3.79□□□□□ -1.8
NXF3-201ENST00000395065 CHTF8P0CG12 524 aa3.78□□□□□ -1.8
NXF3-201ENST00000395065 SRRM2Q9UQ35 2752 aaKnown RBP3.78□□□□□ -1.8
NXF3-201ENST00000395065 RTL8CO15255 209 aa3.78□□□□□ -1.81
NXF3-201ENST00000395065 STARD9Q9P2P6 4700 aa3.77□□□□□ -1.81
NXF3-201ENST00000395065 ACYP2P14621 99 aa3.77□□□□□ -1.81
NXF3-201ENST00000395065 SPATA8Q6RVD6 105 aa3.77□□□□□ -1.81
NXF3-201ENST00000395065 IGHV6-1A0A0B4J1U7 121 aa3.76□□□□□ -1.81
NXF3-201ENST00000395065 LINC01554Q52M75 96 aa3.76□□□□□ -1.81
NXF3-201ENST00000395065 LINC00483Q53H64 154 aa3.76□□□□□ -1.81
NXF3-201ENST00000395065 PRAC1Q96KF2 57 aa3.76□□□□□ -1.81
NXF3-201ENST00000395065 STAB2Q8WWQ8 2551 aa3.76□□□□□ -1.81
NXF3-201ENST00000395065 KRTAP1-5Q9BYS1 174 aa3.76□□□□□ -1.81
NXF3-201ENST00000395065 Q5W150 140 aa3.75□□□□□ -1.81
NXF3-201ENST00000395065 NOTCH2NLQ7Z3S9 236 aa3.75□□□□□ -1.81
NXF3-201ENST00000395065 ADM2Q7Z4H4 148 aa3.75□□□□□ -1.81
NXF3-201ENST00000395065 DMAC1Q96GE9 116 aa3.75□□□□□ -1.81
NXF3-201ENST00000395065 C14orf177Q52M58 125 aa3.74□□□□□ -1.81
NXF3-201ENST00000395065 IGLV9-49A0A0B4J1Y8 123 aa3.73□□□□□ -1.81
NXF3-201ENST00000395065 CDK2AP2O75956 126 aa3.73□□□□□ -1.81
NXF3-201ENST00000395065 WWC2-AS2Q96NR7 200 aa3.73□□□□□ -1.81
NXF3-201ENST00000395065 HECTD4Q9Y4D8 3996 aa3.73□□□□□ -1.81
NXF3-201ENST00000395065 VPS13DQ5THJ4 4388 aa3.72□□□□□ -1.81
NXF3-201ENST00000395065 A0A1B0GU69 56 aa3.72□□□□□ -1.81
NXF3-201ENST00000395065 UBE2DNLQ8IWF7 75 aa3.72□□□□□ -1.81
NXF3-201ENST00000395065 DNAH2Q9P225 4427 aa3.72□□□□□ -1.81
NXF3-201ENST00000395065 HYDINQ4G0P3 5121 aa3.71□□□□□ -1.81
NXF3-201ENST00000395065 FRAS1Q86XX4 4008 aa3.71□□□□□ -1.81
NXF3-201ENST00000395065 KMT2AQ03164 3969 aa3.7□□□□□ -1.82
NXF3-201ENST00000395065 PANO1I0J062 215 aa3.7□□□□□ -1.82
NXF3-201ENST00000395065 UQCR11O14957 56 aa3.7□□□□□ -1.82
NXF3-201ENST00000395065 APLNQ9ULZ1 77 aa3.7□□□□□ -1.82
NXF3-201ENST00000395065 EPPK1P58107 5090 aaKnown RBP3.7□□□□□ -1.82
NXF3-201ENST00000395065 KRTAP23-1A1A580 65 aa3.69□□□□□ -1.82
NXF3-201ENST00000395065 MIR22HGQ0VDD5 57 aa3.69□□□□□ -1.82
NXF3-201ENST00000395065 ZNF706Q9Y5V0 76 aaPredicted RBP3.69□□□□□ -1.82
NXF3-201ENST00000395065 DNAH8Q96JB1 4490 aa3.69□□□□□ -1.82
NXF3-201ENST00000395065 DNAH17Q9UFH2 4485 aa3.67□□□□□ -1.82
NXF3-201ENST00000395065 SPACA4Q8TDM5 124 aa3.67□□□□□ -1.82
NXF3-201ENST00000395065 IGKV2-30P06310 120 aa3.66□□□□□ -1.82
NXF3-201ENST00000395065 RETNLBQ9BQ08 111 aa3.66□□□□□ -1.82
NXF3-201ENST00000395065 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.65□□□□□ -1.83
NXF3-201ENST00000395065 SACSQ9NZJ4 4579 aa3.65□□□□□ -1.83
NXF3-201ENST00000395065 IGLV5-52A0A0A0MRZ9 124 aa3.64□□□□□ -1.83
NXF3-201ENST00000395065 NBDYA0A0U1RRE5 68 aa3.64□□□□□ -1.83
NXF3-201ENST00000395065 ZNF861PO60384 105 aa3.64□□□□□ -1.83
NXF3-201ENST00000395065 CSAG1Q6PB30 78 aa3.64□□□□□ -1.83
NXF3-201ENST00000395065 Q6ZRN7 208 aaPredicted RBP3.64□□□□□ -1.83
NXF3-201ENST00000395065 RYR2Q92736 4967 aa3.63□□□□□ -1.83
NXF3-201ENST00000395065 SPINK6Q6UWN8 80 aa3.63□□□□□ -1.83
NXF3-201ENST00000395065 ANAPC11Q9NYG5 84 aa3.63□□□□□ -1.83
NXF3-201ENST00000395065 PSORS1C2Q9UIG4 136 aa3.63□□□□□ -1.83
NXF3-201ENST00000395065 NUPR2A6NF83 97 aa3.62□□□□□ -1.83
NXF3-201ENST00000395065 IGLV7-43P04211 117 aa3.62□□□□□ -1.83
NXF3-201ENST00000395065 SEC61BP60468 96 aaKnown RBP3.62□□□□□ -1.83
NXF3-201ENST00000395065 DNAH6Q9C0G6 4158 aa3.62□□□□□ -1.83
NXF3-201ENST00000395065 DNAH11Q96DT5 4516 aa3.61□□□□□ -1.83
NXF3-201ENST00000395065 DNAH5Q8TE73 4624 aa3.61□□□□□ -1.83
NXF3-201ENST00000395065 SSBP3-AS1Q7Z2R9 100 aa3.6□□□□□ -1.83
NXF3-201ENST00000395065 KRTAP16-1A8MUX0 517 aa3.6□□□□□ -1.83
NXF3-201ENST00000395065 IGKV2D-30A0A075B6S6 120 aa3.58□□□□□ -1.84
NXF3-201ENST00000395065 A0A087WTM6 91 aa3.58□□□□□ -1.84
NXF3-201ENST00000395065 CIRBP-AS1Q8TBR5 109 aa3.58□□□□□ -1.84
NXF3-201ENST00000395065 A8MUU9 505 aa3.57□□□□□ -1.84
NXF3-201ENST00000395065 BIRC6Q9NR09 4857 aa3.57□□□□□ -1.84
NXF3-201ENST00000395065 FAT2Q9NYQ8 4349 aa3.57□□□□□ -1.84
NXF3-201ENST00000395065 PCLOQ9Y6V0 5065 aa3.57□□□□□ -1.84
NXF3-201ENST00000395065 LY6G6CO95867 125 aa3.56□□□□□ -1.84
NXF3-201ENST00000395065 KRTAP25-1Q3LHN0 102 aa3.55□□□□□ -1.84
NXF3-201ENST00000395065 PKD1P98161 4303 aa3.55□□□□□ -1.84
NXF3-201ENST00000395065 C1orf134Q5TEV5 83 aa3.54□□□□□ -1.84
NXF3-201ENST00000395065 Q6ZSA8 131 aa3.54□□□□□ -1.84
NXF3-201ENST00000395065 H0YAA0 97 aa3.53□□□□□ -1.84
NXF3-201ENST00000395065 ROMO1P60602 79 aa3.53□□□□□ -1.84
NXF3-201ENST00000395065 LINC00304Q8N9R0 145 aa3.53□□□□□ -1.84
NXF3-201ENST00000395065 KRTAP17-1Q9BYP8 105 aa3.52□□□□□ -1.85
NXF3-201ENST00000395065 LRP1BQ9NZR2 4599 aa3.51□□□□□ -1.85
NXF3-201ENST00000395065 KRTAP13-2Q52LG2 175 aa3.5□□□□□ -1.85
NXF3-201ENST00000395065 PKHD1P08F94 4074 aa3.5□□□□□ -1.85
NXF3-201ENST00000395065 VPS13BQ7Z7G8 4022 aa3.49□□□□□ -1.85
NXF3-201ENST00000395065 RYR1P21817 5038 aa3.49□□□□□ -1.85
NXF3-201ENST00000395065 SPINK1P00995 79 aa3.48□□□□□ -1.85
NXF3-201ENST00000395065 A0A1B0GU33 70 aa3.47□□□□□ -1.85
NXF3-201ENST00000395065 KRTAP10-2P60368 255 aa3.47□□□□□ -1.85
NXF3-201ENST00000395065 Q8N1X5 172 aa3.46□□□□□ -1.85
NXF3-201ENST00000395065 TYMSOSQ8TAI1 123 aa3.46□□□□□ -1.85
NXF3-201ENST00000395065 H1FX-AS1Q4G0G2 97 aa3.46□□□□□ -1.86
NXF3-201ENST00000395065 DYNC1H1Q14204 4646 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms