RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 ITPR2Q14571 2701 aa7.35□□□□□ -1.23
SLC28A1-203ENST00000394573 IGLV7-43P04211 117 aa7.35□□□□□ -1.23
SLC28A1-203ENST00000394573 SPRR1BP22528 89 aa7.34□□□□□ -1.23
SLC28A1-203ENST00000394573 KRTAP10-3P60369 221 aa7.34□□□□□ -1.23
SLC28A1-203ENST00000394573 NDUFAF8A1L188 74 aa7.33□□□□□ -1.24
SLC28A1-203ENST00000394573 LYSTQ99698 3801 aa7.33□□□□□ -1.24
SLC28A1-203ENST00000394573 FLNBO75369 2602 aaKnown RBP7.33□□□□□ -1.24
SLC28A1-203ENST00000394573 FASNP49327 2511 aaKnown RBP7.33□□□□□ -1.24
SLC28A1-203ENST00000394573 COL6A5A8TX70 2615 aa7.32□□□□□ -1.24
SLC28A1-203ENST00000394573 MEGF8Q7Z7M0 2845 aa7.32□□□□□ -1.24
SLC28A1-203ENST00000394573 SSBP3-AS1Q7Z2R9 100 aa7.32□□□□□ -1.24
SLC28A1-203ENST00000394573 ANAPC11Q9NYG5 84 aa7.3□□□□□ -1.24
SLC28A1-203ENST00000394573 H0YAA0 97 aa7.28□□□□□ -1.24
SLC28A1-203ENST00000394573 SPINT4Q6UDR6 99 aa7.27□□□□□ -1.25
SLC28A1-203ENST00000394573 DNAH1Q9P2D7 4330 aa7.26□□□□□ -1.25
SLC28A1-203ENST00000394573 DEFB113Q30KQ7 82 aa7.25□□□□□ -1.25
SLC28A1-203ENST00000394573 H3BNG1 76 aa7.23□□□□□ -1.25
SLC28A1-203ENST00000394573 Q6ZSA8 131 aa7.23□□□□□ -1.25
SLC28A1-203ENST00000394573 IGKV2D-30A0A075B6S6 120 aa7.22□□□□□ -1.25
SLC28A1-203ENST00000394573 IGKV2-30P06310 120 aa7.22□□□□□ -1.25
SLC28A1-203ENST00000394573 ANK2Q01484 3957 aa7.21□□□□□ -1.25
SLC28A1-203ENST00000394573 MAST4O15021 2626 aa7.21□□□□□ -1.26
SLC28A1-203ENST00000394573 NSD1Q96L73 2696 aaPredicted RBP7.19□□□□□ -1.26
SLC28A1-203ENST00000394573 C20orf166-AS1Q96NR2 134 aa7.19□□□□□ -1.26
SLC28A1-203ENST00000394573 KRTAP16-1A8MUX0 517 aa7.18□□□□□ -1.26
SLC28A1-203ENST00000394573 PSORS1C2Q9UIG4 136 aa7.18□□□□□ -1.26
SLC28A1-203ENST00000394573 TGP01266 2768 aa7.17□□□□□ -1.26
SLC28A1-203ENST00000394573 DMBT1Q9UGM3 2413 aaPredicted RBP7.17□□□□□ -1.26
SLC28A1-203ENST00000394573 J3QKU1 62 aa7.16□□□□□ -1.26
SLC28A1-203ENST00000394573 FRAS1Q86XX4 4008 aa7.15□□□□□ -1.26
SLC28A1-203ENST00000394573 KRTAP1-3Q8IUG1 177 aa7.15□□□□□ -1.26
SLC28A1-203ENST00000394573 C14orf177Q52M58 125 aa7.14□□□□□ -1.27
SLC28A1-203ENST00000394573 Q8N1X5 172 aa7.14□□□□□ -1.27
SLC28A1-203ENST00000394573 A0A087WTM6 91 aa7.14□□□□□ -1.27
SLC28A1-203ENST00000394573 PANO1I0J062 215 aa7.14□□□□□ -1.27
SLC28A1-203ENST00000394573 TYMSOSQ8TAI1 123 aa7.14□□□□□ -1.27
SLC28A1-203ENST00000394573 LY6G6CO95867 125 aa7.13□□□□□ -1.27
SLC28A1-203ENST00000394573 FAM229AH3BQW9 127 aa7.12□□□□□ -1.27
SLC28A1-203ENST00000394573 KRTAP13-1Q8IUC0 172 aa7.11□□□□□ -1.27
SLC28A1-203ENST00000394573 WWC2-AS2Q96NR7 200 aa7.11□□□□□ -1.27
SLC28A1-203ENST00000394573 DNAH9Q9NYC9 4486 aa7.11□□□□□ -1.27
SLC28A1-203ENST00000394573 CIRBP-AS1Q8TBR5 109 aa7.08□□□□□ -1.28
SLC28A1-203ENST00000394573 STAB2Q8WWQ8 2551 aa7.08□□□□□ -1.28
SLC28A1-203ENST00000394573 A0A1B0GU33 70 aa7.08□□□□□ -1.28
SLC28A1-203ENST00000394573 KRTAP1-5Q9BYS1 174 aa7.08□□□□□ -1.28
SLC28A1-203ENST00000394573 NUPR2A6NF83 97 aa7.06□□□□□ -1.28
SLC28A1-203ENST00000394573 DNAH8Q96JB1 4490 aa7.06□□□□□ -1.28
SLC28A1-203ENST00000394573 C10orf95Q9H7T3 257 aa7.06□□□□□ -1.28
SLC28A1-203ENST00000394573 SMR3AQ99954 134 aa7.05□□□□□ -1.28
SLC28A1-203ENST00000394573 TPRXLQ17RH7 258 aa7.04□□□□□ -1.28
SLC28A1-203ENST00000394573 KRTAP1-1Q07627 177 aa7.03□□□□□ -1.28
SLC28A1-203ENST00000394573 KRTAP15-1Q3LI76 137 aa7.03□□□□□ -1.28
SLC28A1-203ENST00000394573 DNAH17Q9UFH2 4485 aa7.01□□□□□ -1.29
SLC28A1-203ENST00000394573 K7ERS5 55 aa6.99□□□□□ -1.29
SLC28A1-203ENST00000394573 H1FX-AS1Q4G0G2 97 aa6.99□□□□□ -1.29
SLC28A1-203ENST00000394573 STAB1Q9NY15 2570 aa6.98□□□□□ -1.29
SLC28A1-203ENST00000394573 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.97□□□□□ -1.29
SLC28A1-203ENST00000394573 CMYA5Q8N3K9 4069 aa6.96□□□□□ -1.29
SLC28A1-203ENST00000394573 KRTAP10-11P60412 298 aa6.96□□□□□ -1.3
SLC28A1-203ENST00000394573 LUZP6Q538Z0 58 aa6.92□□□□□ -1.3
SLC28A1-203ENST00000394573 A0A0D9SG42 100 aa6.87□□□□□ -1.31
SLC28A1-203ENST00000394573 DNAH7Q8WXX0 4024 aa6.87□□□□□ -1.31
SLC28A1-203ENST00000394573 MGAM2Q2M2H8 2515 aa6.86□□□□□ -1.31
SLC28A1-203ENST00000394573 COX6B2Q6YFQ2 88 aa6.86□□□□□ -1.31
SLC28A1-203ENST00000394573 NBDYA0A0U1RRE5 68 aa6.84□□□□□ -1.31
SLC28A1-203ENST00000394573 UBE2DNLQ8IWF7 75 aa6.82□□□□□ -1.32
SLC28A1-203ENST00000394573 SPACA4Q8TDM5 124 aa6.81□□□□□ -1.32
SLC28A1-203ENST00000394573 FBN3Q75N90 2809 aa6.8□□□□□ -1.32
SLC28A1-203ENST00000394573 KMT2AQ03164 3969 aa6.78□□□□□ -1.32
SLC28A1-203ENST00000394573 HUWE1Q7Z6Z7 4374 aaKnown RBP6.77□□□□□ -1.33
SLC28A1-203ENST00000394573 RPL37P61927 97 aaKnown RBP6.76□□□□□ -1.33
SLC28A1-203ENST00000394573 VPS13DQ5THJ4 4388 aa6.75□□□□□ -1.33
SLC28A1-203ENST00000394573 KRTAP24-1Q3LI83 254 aa6.74□□□□□ -1.33
SLC28A1-203ENST00000394573 KRTAP3-1Q9BYR8 98 aa6.74□□□□□ -1.33
SLC28A1-203ENST00000394573 APLNQ9ULZ1 77 aa6.73□□□□□ -1.33
SLC28A1-203ENST00000394573 KRTAP13-4Q3LI77 160 aa6.71□□□□□ -1.34
SLC28A1-203ENST00000394573 HECTD4Q9Y4D8 3996 aa6.7□□□□□ -1.34
SLC28A1-203ENST00000394573 KRTAP13-2Q52LG2 175 aa6.65□□□□□ -1.35
SLC28A1-203ENST00000394573 PLECQ15149 4684 aaKnown RBP6.64□□□□□ -1.35
SLC28A1-203ENST00000394573 DNAH3Q8TD57 4116 aa6.62□□□□□ -1.35
SLC28A1-203ENST00000394573 Q6ZRN7 208 aaPredicted RBP6.6□□□□□ -1.35
SLC28A1-203ENST00000394573 DNAH2Q9P225 4427 aa6.58□□□□□ -1.36
SLC28A1-203ENST00000394573 KRTAP10-6P60371 365 aaPredicted RBP6.55□□□□□ -1.36
SLC28A1-203ENST00000394573 S4R3F8 94 aa6.55□□□□□ -1.36
SLC28A1-203ENST00000394573 KRTAP12-2P59991 146 aa6.54□□□□□ -1.36
SLC28A1-203ENST00000394573 C9orf92A6NGG3 77 aa6.54□□□□□ -1.36
SLC28A1-203ENST00000394573 DNAH11Q96DT5 4516 aa6.52□□□□□ -1.37
SLC28A1-203ENST00000394573 DNAH6Q9C0G6 4158 aa6.52□□□□□ -1.37
SLC28A1-203ENST00000394573 LRP1BQ9NZR2 4599 aa6.46□□□□□ -1.38
SLC28A1-203ENST00000394573 KRTAP3-2Q9BYR7 98 aa6.44□□□□□ -1.38
SLC28A1-203ENST00000394573 XP32Q5T750 250 aa6.41□□□□□ -1.38
SLC28A1-203ENST00000394573 PLAC4Q8WY50 150 aa6.4□□□□□ -1.39
SLC28A1-203ENST00000394573 SEC61BP60468 96 aaKnown RBP6.39□□□□□ -1.39
SLC28A1-203ENST00000394573 STARD9Q9P2P6 4700 aa6.37□□□□□ -1.39
SLC28A1-203ENST00000394573 KRTAP1-4P0C5Y4 121 aa6.36□□□□□ -1.39
SLC28A1-203ENST00000394573 KRTAP12-1P59990 96 aa6.36□□□□□ -1.39
SLC28A1-203ENST00000394573 KRTAP3-3Q9BYR6 98 aa6.35□□□□□ -1.39
SLC28A1-203ENST00000394573 DYNC2H1Q8NCM8 4307 aaKnown RBP6.35□□□□□ -1.39
SLC28A1-203ENST00000394573 VPS13BQ7Z7G8 4022 aa6.33□□□□□ -1.4
SLC28A1-203ENST00000394573 DNAH5Q8TE73 4624 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms