RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 SPRR1BP22528 89 aa9.96□□□□□ -0.82
SIPA1-201ENST00000394224 WWC2-AS2Q96NR7 200 aa9.95□□□□□ -0.82
SIPA1-201ENST00000394224 IGLV5-52A0A0A0MRZ9 124 aa9.95□□□□□ -0.82
SIPA1-201ENST00000394224 SPACA4Q8TDM5 124 aa9.94□□□□□ -0.82
SIPA1-201ENST00000394224 H3BPC8 53 aa9.93□□□□□ -0.82
SIPA1-201ENST00000394224 IGKV2D-30A0A075B6S6 120 aa9.93□□□□□ -0.82
SIPA1-201ENST00000394224 IGKV2-30P06310 120 aa9.93□□□□□ -0.82
SIPA1-201ENST00000394224 PRAC1Q96KF2 57 aa9.92□□□□□ -0.82
SIPA1-201ENST00000394224 DMBT1Q9UGM3 2413 aaPredicted RBP9.91□□□□□ -0.82
SIPA1-201ENST00000394224 FLG2Q5D862 2391 aaPredicted RBP9.9□□□□□ -0.82
SIPA1-201ENST00000394224 KRTAP13-1Q8IUC0 172 aa9.9□□□□□ -0.82
SIPA1-201ENST00000394224 TP53AIP1Q9HCN2 124 aa9.9□□□□□ -0.83
SIPA1-201ENST00000394224 STARD9Q9P2P6 4700 aa9.9□□□□□ -0.83
SIPA1-201ENST00000394224 ZNF861PO60384 105 aa9.89□□□□□ -0.83
SIPA1-201ENST00000394224 Q6ZRN7 208 aaPredicted RBP9.89□□□□□ -0.83
SIPA1-201ENST00000394224 Q75L30 129 aa9.86□□□□□ -0.83
SIPA1-201ENST00000394224 RBM12B-AS1Q9P1G2 102 aa9.86□□□□□ -0.83
SIPA1-201ENST00000394224 DNAH3Q8TD57 4116 aa9.85□□□□□ -0.83
SIPA1-201ENST00000394224 ADM2Q7Z4H4 148 aa9.85□□□□□ -0.83
SIPA1-201ENST00000394224 ZNF706Q9Y5V0 76 aaPredicted RBP9.83□□□□□ -0.84
SIPA1-201ENST00000394224 KTN1-AS1Q86SY8 53 aa9.83□□□□□ -0.84
SIPA1-201ENST00000394224 NUPR2A6NF83 97 aa9.82□□□□□ -0.84
SIPA1-201ENST00000394224 ATP11AUNQ6ZP68 121 aa9.82□□□□□ -0.84
SIPA1-201ENST00000394224 Q6ZR54 194 aa9.82□□□□□ -0.84
SIPA1-201ENST00000394224 DNAH8Q96JB1 4490 aa9.81□□□□□ -0.84
SIPA1-201ENST00000394224 PRKDCP78527 4128 aaKnown RBP9.81□□□□□ -0.84
SIPA1-201ENST00000394224 CDC42SE1Q9NRR8 79 aa9.8□□□□□ -0.84
SIPA1-201ENST00000394224 DNHD1Q96M86 4753 aa9.79□□□□□ -0.84
SIPA1-201ENST00000394224 DNAH6Q9C0G6 4158 aa9.79□□□□□ -0.84
SIPA1-201ENST00000394224 LINC00313P59037 77 aa9.77□□□□□ -0.84
SIPA1-201ENST00000394224 LINC01558Q9Y6Z2 57 aa9.77□□□□□ -0.85
SIPA1-201ENST00000394224 IGLV7-43P04211 117 aa9.76□□□□□ -0.85
SIPA1-201ENST00000394224 C1orf134Q5TEV5 83 aa9.76□□□□□ -0.85
SIPA1-201ENST00000394224 A0A1B0GU69 56 aa9.75□□□□□ -0.85
SIPA1-201ENST00000394224 KRTAP10-2P60368 255 aa9.75□□□□□ -0.85
SIPA1-201ENST00000394224 DNAH17Q9UFH2 4485 aa9.75□□□□□ -0.85
SIPA1-201ENST00000394224 ACYP2P14621 99 aa9.73□□□□□ -0.85
SIPA1-201ENST00000394224 Q8N1X5 172 aa9.73□□□□□ -0.85
SIPA1-201ENST00000394224 A6NN06 94 aa9.71□□□□□ -0.85
SIPA1-201ENST00000394224 DNAH11Q96DT5 4516 aa9.71□□□□□ -0.85
SIPA1-201ENST00000394224 LINC00483Q53H64 154 aa9.71□□□□□ -0.86
SIPA1-201ENST00000394224 HECTD4Q9Y4D8 3996 aa9.7□□□□□ -0.86
SIPA1-201ENST00000394224 DNAH2Q9P225 4427 aa9.68□□□□□ -0.86
SIPA1-201ENST00000394224 C7orf65Q6ZTY9 151 aa9.68□□□□□ -0.86
SIPA1-201ENST00000394224 ASB16-AS1Q495Z4 193 aa9.67□□□□□ -0.86
SIPA1-201ENST00000394224 VPS13DQ5THJ4 4388 aa9.66□□□□□ -0.86
SIPA1-201ENST00000394224 PLAC8Q9NZF1 115 aa9.65□□□□□ -0.86
SIPA1-201ENST00000394224 SMR3BP02814 79 aaPredicted RBP9.61□□□□□ -0.87
SIPA1-201ENST00000394224 C4orf48Q5BLP8 95 aa9.61□□□□□ -0.87
SIPA1-201ENST00000394224 C9orf92A6NGG3 77 aa9.6□□□□□ -0.87
SIPA1-201ENST00000394224 KRTAP13-2Q52LG2 175 aa9.6□□□□□ -0.87
SIPA1-201ENST00000394224 PLA2G1BP04054 148 aaKnown RBP9.58□□□□□ -0.88
SIPA1-201ENST00000394224 LRP1BQ9NZR2 4599 aa9.57□□□□□ -0.88
SIPA1-201ENST00000394224 FAM229AH3BQW9 127 aa9.56□□□□□ -0.88
SIPA1-201ENST00000394224 KRTAP10-1P60331 282 aa9.55□□□□□ -0.88
SIPA1-201ENST00000394224 MIR22HGQ0VDD5 57 aa9.54□□□□□ -0.88
SIPA1-201ENST00000394224 KRTAP13-3Q3SY46 172 aa9.5□□□□□ -0.89
SIPA1-201ENST00000394224 CRIPTQ9P021 101 aa9.5□□□□□ -0.89
SIPA1-201ENST00000394224 SSBP3-AS1Q7Z2R9 100 aa9.5□□□□□ -0.89
SIPA1-201ENST00000394224 DMAC1Q96GE9 116 aa9.5□□□□□ -0.89
SIPA1-201ENST00000394224 TYMSOSQ8TAI1 123 aa9.49□□□□□ -0.89
SIPA1-201ENST00000394224 UQCR11O14957 56 aa9.46□□□□□ -0.89
SIPA1-201ENST00000394224 C8orf87E5RJ46 101 aa9.45□□□□□ -0.9
SIPA1-201ENST00000394224 CSAG1Q6PB30 78 aa9.42□□□□□ -0.9
SIPA1-201ENST00000394224 ALMS1Q8TCU4 4167 aa9.42□□□□□ -0.9
SIPA1-201ENST00000394224 VPS13BQ7Z7G8 4022 aa9.4□□□□□ -0.9
SIPA1-201ENST00000394224 HYDINQ4G0P3 5121 aa9.4□□□□□ -0.9
SIPA1-201ENST00000394224 FAT2Q9NYQ8 4349 aa9.4□□□□□ -0.91
SIPA1-201ENST00000394224 DNAH5Q8TE73 4624 aa9.34□□□□□ -0.91
SIPA1-201ENST00000394224 PKHD1P08F94 4074 aa9.33□□□□□ -0.92
SIPA1-201ENST00000394224 KRTAP16-1A8MUX0 517 aa9.32□□□□□ -0.92
SIPA1-201ENST00000394224 KRTAP1-4P0C5Y4 121 aa9.3□□□□□ -0.92
SIPA1-201ENST00000394224 FAT1Q14517 4588 aa9.3□□□□□ -0.92
SIPA1-201ENST00000394224 SPATA8Q6RVD6 105 aa9.3□□□□□ -0.92
SIPA1-201ENST00000394224 DYNC2H1Q8NCM8 4307 aaKnown RBP9.27□□□□□ -0.92
SIPA1-201ENST00000394224 LINC01554Q52M75 96 aa9.26□□□□□ -0.93
SIPA1-201ENST00000394224 LINC00304Q8N9R0 145 aa9.25□□□□□ -0.93
SIPA1-201ENST00000394224 H3BS24 57 aa9.18□□□□□ -0.94
SIPA1-201ENST00000394224 A0A0D9SG42 100 aa9.17□□□□□ -0.94
SIPA1-201ENST00000394224 MYCBP2O75592 4640 aa9.17□□□□□ -0.94
SIPA1-201ENST00000394224 Q6ZSA8 131 aa9.16□□□□□ -0.94
SIPA1-201ENST00000394224 H0YAA0 97 aa9.12□□□□□ -0.95
SIPA1-201ENST00000394224 A0A1B0GU33 70 aa9.11□□□□□ -0.95
SIPA1-201ENST00000394224 KRTAP3-1Q9BYR8 98 aa9.02□□□□□ -0.97
SIPA1-201ENST00000394224 PKD1P98161 4303 aa9.01□□□□□ -0.97
SIPA1-201ENST00000394224 LRP1Q07954 4544 aaKnown RBP8.97□□□□□ -0.97
SIPA1-201ENST00000394224 H1FX-AS1Q4G0G2 97 aa8.93□□□□□ -0.98
SIPA1-201ENST00000394224 DYNC1H1Q14204 4646 aaKnown RBP8.93□□□□□ -0.98
SIPA1-201ENST00000394224 A8MUU9 505 aa8.89□□□□□ -0.99
SIPA1-201ENST00000394224 COX6B2Q6YFQ2 88 aa8.88□□□□□ -0.99
SIPA1-201ENST00000394224 K7ERS5 55 aa8.88□□□□□ -0.99
SIPA1-201ENST00000394224 FAT3Q8TDW7 4589 aa8.87□□□□□ -0.99
SIPA1-201ENST00000394224 C10orf95Q9H7T3 257 aa8.83□□□□□ -1
SIPA1-201ENST00000394224 KRTAP25-1Q3LHN0 102 aa8.82□□□□□ -1
SIPA1-201ENST00000394224 KMT2CQ8NEZ4 4911 aaKnown RBP8.8□□□□□ -1
SIPA1-201ENST00000394224 C20orf166-AS1Q96NR2 134 aa8.77□□□□□ -1.01
SIPA1-201ENST00000394224 APOBP04114 4563 aaKnown RBP8.76□□□□□ -1.01
SIPA1-201ENST00000394224 SPINT4Q6UDR6 99 aa8.76□□□□□ -1.01
SIPA1-201ENST00000394224 KRTAP13-4Q3LI77 160 aa8.73□□□□□ -1.01
SIPA1-201ENST00000394224 HSPG2P98160 4391 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms