RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 CDK2AP2O75956 126 aa9.83□□□□□ -0.84
CNP-201ENST00000393888 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.81□□□□□ -0.84
CNP-201ENST00000393888 PRKDCP78527 4128 aaKnown RBP9.81□□□□□ -0.84
CNP-201ENST00000393888 SPINK6Q6UWN8 80 aa9.8□□□□□ -0.84
CNP-201ENST00000393888 Q5W150 140 aa9.79□□□□□ -0.84
CNP-201ENST00000393888 C7orf65Q6ZTY9 151 aa9.78□□□□□ -0.84
CNP-201ENST00000393888 APLNQ9ULZ1 77 aa9.76□□□□□ -0.85
CNP-201ENST00000393888 WWC2-AS2Q96NR7 200 aa9.75□□□□□ -0.85
CNP-201ENST00000393888 LINC00483Q53H64 154 aa9.73□□□□□ -0.85
CNP-201ENST00000393888 PLECQ15149 4684 aaKnown RBP9.73□□□□□ -0.85
CNP-201ENST00000393888 FBN3Q75N90 2809 aa9.73□□□□□ -0.85
CNP-201ENST00000393888 DNAH8Q96JB1 4490 aa9.72□□□□□ -0.85
CNP-201ENST00000393888 SPACA4Q8TDM5 124 aa9.71□□□□□ -0.86
CNP-201ENST00000393888 PSORS1C2Q9UIG4 136 aa9.7□□□□□ -0.86
CNP-201ENST00000393888 ALMS1Q8TCU4 4167 aa9.7□□□□□ -0.86
CNP-201ENST00000393888 RETNLBQ9BQ08 111 aa9.69□□□□□ -0.86
CNP-201ENST00000393888 NBDYA0A0U1RRE5 68 aa9.68□□□□□ -0.86
CNP-201ENST00000393888 PRAC1Q96KF2 57 aa9.68□□□□□ -0.86
CNP-201ENST00000393888 Q6ZRN7 208 aaPredicted RBP9.67□□□□□ -0.86
CNP-201ENST00000393888 HECTD4Q9Y4D8 3996 aa9.66□□□□□ -0.86
CNP-201ENST00000393888 KRTAP13-3Q3SY46 172 aa9.66□□□□□ -0.86
CNP-201ENST00000393888 TGP01266 2768 aa9.65□□□□□ -0.86
CNP-201ENST00000393888 ZNF706Q9Y5V0 76 aaPredicted RBP9.65□□□□□ -0.86
CNP-201ENST00000393888 LINC00313P59037 77 aa9.65□□□□□ -0.87
CNP-201ENST00000393888 ACYP2P14621 99 aa9.64□□□□□ -0.87
CNP-201ENST00000393888 ADM2Q7Z4H4 148 aa9.64□□□□□ -0.87
CNP-201ENST00000393888 CIRBP-AS1Q8TBR5 109 aa9.63□□□□□ -0.87
CNP-201ENST00000393888 IGLV5-52A0A0A0MRZ9 124 aa9.62□□□□□ -0.87
CNP-201ENST00000393888 DYNC2H1Q8NCM8 4307 aaKnown RBP9.62□□□□□ -0.87
CNP-201ENST00000393888 ZNF861PO60384 105 aa9.6□□□□□ -0.87
CNP-201ENST00000393888 A0A1B0GU69 56 aa9.56□□□□□ -0.88
CNP-201ENST00000393888 DNAH17Q9UFH2 4485 aa9.55□□□□□ -0.88
CNP-201ENST00000393888 A0A087WTM6 91 aa9.55□□□□□ -0.88
CNP-201ENST00000393888 RTL8CO15255 209 aa9.54□□□□□ -0.88
CNP-201ENST00000393888 DMAC1Q96GE9 116 aa9.54□□□□□ -0.88
CNP-201ENST00000393888 KMT2AQ03164 3969 aa9.51□□□□□ -0.89
CNP-201ENST00000393888 STARD9Q9P2P6 4700 aa9.51□□□□□ -0.89
CNP-201ENST00000393888 C8orf87E5RJ46 101 aa9.48□□□□□ -0.89
CNP-201ENST00000393888 VPS13DQ5THJ4 4388 aa9.48□□□□□ -0.89
CNP-201ENST00000393888 DNAH2Q9P225 4427 aa9.48□□□□□ -0.89
CNP-201ENST00000393888 IGLV7-43P04211 117 aa9.45□□□□□ -0.9
CNP-201ENST00000393888 PLA2G1BP04054 148 aaKnown RBP9.44□□□□□ -0.9
CNP-201ENST00000393888 SPATA8Q6RVD6 105 aa9.44□□□□□ -0.9
CNP-201ENST00000393888 FAM229AH3BQW9 127 aa9.43□□□□□ -0.9
CNP-201ENST00000393888 IGKV2-30P06310 120 aa9.43□□□□□ -0.9
CNP-201ENST00000393888 MIR22HGQ0VDD5 57 aa9.43□□□□□ -0.9
CNP-201ENST00000393888 IGKV2D-30A0A075B6S6 120 aa9.4□□□□□ -0.9
CNP-201ENST00000393888 NUPR2A6NF83 97 aa9.4□□□□□ -0.9
CNP-201ENST00000393888 UQCR11O14957 56 aa9.38□□□□□ -0.91
CNP-201ENST00000393888 DNAH6Q9C0G6 4158 aa9.38□□□□□ -0.91
CNP-201ENST00000393888 LINC01554Q52M75 96 aa9.35□□□□□ -0.91
CNP-201ENST00000393888 SSBP3-AS1Q7Z2R9 100 aa9.35□□□□□ -0.91
CNP-201ENST00000393888 SPINK1P00995 79 aa9.32□□□□□ -0.92
CNP-201ENST00000393888 DNAH11Q96DT5 4516 aa9.32□□□□□ -0.92
CNP-201ENST00000393888 KRTAP16-1A8MUX0 517 aa9.31□□□□□ -0.92
CNP-201ENST00000393888 KRTAP13-2Q52LG2 175 aa9.31□□□□□ -0.92
CNP-201ENST00000393888 CSAG1Q6PB30 78 aa9.29□□□□□ -0.92
CNP-201ENST00000393888 Q8N1X5 172 aa9.24□□□□□ -0.93
CNP-201ENST00000393888 DNAH5Q8TE73 4624 aa9.22□□□□□ -0.93
CNP-201ENST00000393888 LY6G6CO95867 125 aa9.2□□□□□ -0.94
CNP-201ENST00000393888 C1orf134Q5TEV5 83 aa9.2□□□□□ -0.94
CNP-201ENST00000393888 C4orf48Q5BLP8 95 aa9.2□□□□□ -0.94
CNP-201ENST00000393888 HYDINQ4G0P3 5121 aa9.19□□□□□ -0.94
CNP-201ENST00000393888 KRTAP10-2P60368 255 aa9.18□□□□□ -0.94
CNP-201ENST00000393888 LRP1BQ9NZR2 4599 aa9.18□□□□□ -0.94
CNP-201ENST00000393888 KRTAP1-4P0C5Y4 121 aa9.09□□□□□ -0.95
CNP-201ENST00000393888 VPS13BQ7Z7G8 4022 aa9.08□□□□□ -0.96
CNP-201ENST00000393888 SACSQ9NZJ4 4579 aa9.08□□□□□ -0.96
CNP-201ENST00000393888 Q6ZSA8 131 aa9.08□□□□□ -0.96
CNP-201ENST00000393888 KMT2CQ8NEZ4 4911 aaKnown RBP9.07□□□□□ -0.96
CNP-201ENST00000393888 H0YAA0 97 aa9.06□□□□□ -0.96
CNP-201ENST00000393888 H3BS24 57 aa9.06□□□□□ -0.96
CNP-201ENST00000393888 TYMSOSQ8TAI1 123 aa9.06□□□□□ -0.96
CNP-201ENST00000393888 KRTAP10-1P60331 282 aa9.04□□□□□ -0.96
CNP-201ENST00000393888 PKD1P98161 4303 aa9□□□□□ -0.97
CNP-201ENST00000393888 FAT2Q9NYQ8 4349 aa9□□□□□ -0.97
CNP-201ENST00000393888 A8MUU9 505 aa8.99□□□□□ -0.97
CNP-201ENST00000393888 LINC00304Q8N9R0 145 aa8.98□□□□□ -0.97
CNP-201ENST00000393888 FLG2Q5D862 2391 aaPredicted RBP8.98□□□□□ -0.97
CNP-201ENST00000393888 RYR2Q92736 4967 aa8.96□□□□□ -0.98
CNP-201ENST00000393888 A0A1B0GU33 70 aa8.93□□□□□ -0.98
CNP-201ENST00000393888 C9orf92A6NGG3 77 aa8.93□□□□□ -0.98
CNP-201ENST00000393888 CRIPTQ9P021 101 aa8.93□□□□□ -0.98
CNP-201ENST00000393888 KRTAP25-1Q3LHN0 102 aa8.91□□□□□ -0.98
CNP-201ENST00000393888 KRTAP3-1Q9BYR8 98 aa8.91□□□□□ -0.98
CNP-201ENST00000393888 RYR3Q15413 4870 aa8.9□□□□□ -0.99
CNP-201ENST00000393888 H1FX-AS1Q4G0G2 97 aa8.87□□□□□ -0.99
CNP-201ENST00000393888 PKHD1P08F94 4074 aa8.8□□□□□ -1
CNP-201ENST00000393888 ROMO1P60602 79 aa8.78□□□□□ -1
CNP-201ENST00000393888 COX6B2Q6YFQ2 88 aa8.73□□□□□ -1.01
CNP-201ENST00000393888 C20orf166-AS1Q96NR2 134 aa8.73□□□□□ -1.01
CNP-201ENST00000393888 SMR3BP02814 79 aaPredicted RBP8.72□□□□□ -1.01
CNP-201ENST00000393888 A0A1B0GVY2 172 aa8.67□□□□□ -1.02
CNP-201ENST00000393888 K7ERS5 55 aa8.67□□□□□ -1.02
CNP-201ENST00000393888 RPS29P62273 56 aaKnown RBP8.66□□□□□ -1.02
CNP-201ENST00000393888 DYNC1H1Q14204 4646 aaKnown RBP8.65□□□□□ -1.02
CNP-201ENST00000393888 FAT1Q14517 4588 aa8.61□□□□□ -1.03
CNP-201ENST00000393888 A0A0D9SG42 100 aa8.61□□□□□ -1.03
CNP-201ENST00000393888 DMBT1Q9UGM3 2413 aaPredicted RBP8.6□□□□□ -1.03
CNP-201ENST00000393888 EPPK1P58107 5090 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms