RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 MGAM2Q2M2H8 2515 aa2.11□□□□□ -2.07
TRAV39-201ENST00000390466 PRB2P02812 416 aaPredicted RBP2.1□□□□□ -2.07
TRAV39-201ENST00000390466 SPINK7P58062 85 aa2.1□□□□□ -2.07
TRAV39-201ENST00000390466 PRLHP81277 87 aa2.1□□□□□ -2.07
TRAV39-201ENST00000390466 KRTAP13-1Q8IUC0 172 aa2.1□□□□□ -2.07
TRAV39-201ENST00000390466 PRKDCP78527 4128 aaKnown RBP2.09□□□□□ -2.07
TRAV39-201ENST00000390466 VPS13DQ5THJ4 4388 aa2.09□□□□□ -2.07
TRAV39-201ENST00000390466 A0A096LNI7 61 aa2.09□□□□□ -2.07
TRAV39-201ENST00000390466 H0Y9J4 135 aa2.09□□□□□ -2.07
TRAV39-201ENST00000390466 HRES1P13985 223 aa2.09□□□□□ -2.07
TRAV39-201ENST00000390466 TRRAPQ9Y4A5 3859 aa2.09□□□□□ -2.07
TRAV39-201ENST00000390466 IGKV2-24A0A0C4DH68 120 aa2.08□□□□□ -2.08
TRAV39-201ENST00000390466 A6NED7 52 aa2.08□□□□□ -2.08
TRAV39-201ENST00000390466 DEFB131BA0A096LNP1 70 aa2.07□□□□□ -2.08
TRAV39-201ENST00000390466 C8orf87E5RJ46 101 aa2.07□□□□□ -2.08
TRAV39-201ENST00000390466 KRTAP10-11P60412 298 aa2.07□□□□□ -2.08
TRAV39-201ENST00000390466 LCE4AQ5TA78 99 aa2.07□□□□□ -2.08
TRAV39-201ENST00000390466 KRTAP1-5Q9BYS1 174 aa2.07□□□□□ -2.08
TRAV39-201ENST00000390466 C8orf17Q9NRJ1 99 aa2.07□□□□□ -2.08
TRAV39-201ENST00000390466 DNAH6Q9C0G6 4158 aa2.07□□□□□ -2.08
TRAV39-201ENST00000390466 A0A087X002 238 aa2.06□□□□□ -2.08
TRAV39-201ENST00000390466 RTL8CO15255 209 aa2.06□□□□□ -2.08
TRAV39-201ENST00000390466 PCOTHQ58A44 107 aa2.06□□□□□ -2.08
TRAV39-201ENST00000390466 NOTCH2NLQ7Z3S9 236 aa2.06□□□□□ -2.08
TRAV39-201ENST00000390466 SPTSSBQ8NFR3 76 aa2.06□□□□□ -2.08
TRAV39-201ENST00000390466 C11orf45Q8TAV5 145 aa2.06□□□□□ -2.08
TRAV39-201ENST00000390466 MEGF8Q7Z7M0 2845 aa2.06□□□□□ -2.08
TRAV39-201ENST00000390466 DNAH7Q8WXX0 4024 aa2.06□□□□□ -2.08
TRAV39-201ENST00000390466 DNAH11Q96DT5 4516 aa2.05□□□□□ -2.08
TRAV39-201ENST00000390466 A0A1B0GVX0 72 aa2.05□□□□□ -2.08
TRAV39-201ENST00000390466 LINC00483Q53H64 154 aa2.05□□□□□ -2.08
TRAV39-201ENST00000390466 SPAG11AQ6PDA7 123 aa2.05□□□□□ -2.08
TRAV39-201ENST00000390466 ADM2Q7Z4H4 148 aa2.05□□□□□ -2.08
TRAV39-201ENST00000390466 PRAC1Q96KF2 57 aa2.05□□□□□ -2.08
TRAV39-201ENST00000390466 TP53AIP1Q9HCN2 124 aa2.05□□□□□ -2.08
TRAV39-201ENST00000390466 DNAH2Q9P225 4427 aa2.05□□□□□ -2.08
TRAV39-201ENST00000390466 FRAS1Q86XX4 4008 aa2.04□□□□□ -2.08
TRAV39-201ENST00000390466 K7EIL1 84 aa2.04□□□□□ -2.08
TRAV39-201ENST00000390466 PLA2G1BP04054 148 aaKnown RBP2.04□□□□□ -2.08
TRAV39-201ENST00000390466 LINC00313P59037 77 aa2.04□□□□□ -2.08
TRAV39-201ENST00000390466 Q5W150 140 aa2.04□□□□□ -2.08
TRAV39-201ENST00000390466 PRR26Q8N8Z3 221 aa2.04□□□□□ -2.08
TRAV39-201ENST00000390466 SACSQ9NZJ4 4579 aa2.04□□□□□ -2.08
TRAV39-201ENST00000390466 PANO1I0J062 215 aa2.03□□□□□ -2.08
TRAV39-201ENST00000390466 SPATA8Q6RVD6 105 aa2.03□□□□□ -2.08
TRAV39-201ENST00000390466 DMAC1Q96GE9 116 aa2.03□□□□□ -2.08
TRAV39-201ENST00000390466 WWC2-AS2Q96NR7 200 aa2.03□□□□□ -2.08
TRAV39-201ENST00000390466 MRPL34Q9BQ48 92 aaKnown RBP2.03□□□□□ -2.08
TRAV39-201ENST00000390466 COL7A1Q02388 2944 aa2.03□□□□□ -2.08
TRAV39-201ENST00000390466 NOTCH1P46531 2555 aa2.02□□□□□ -2.09
TRAV39-201ENST00000390466 PLECQ15149 4684 aaKnown RBP2.02□□□□□ -2.09
TRAV39-201ENST00000390466 SRRM2Q9UQ35 2752 aaKnown RBP2.02□□□□□ -2.09
TRAV39-201ENST00000390466 LYSTQ99698 3801 aa2.02□□□□□ -2.09
TRAV39-201ENST00000390466 Q6ZRN7 208 aaPredicted RBP2.01□□□□□ -2.09
TRAV39-201ENST00000390466 HECTD4Q9Y4D8 3996 aa2□□□□□ -2.09
TRAV39-201ENST00000390466 KRTAP9-7A8MTY7 169 aa2□□□□□ -2.09
TRAV39-201ENST00000390466 KRTAP16-1A8MUX0 517 aa2□□□□□ -2.09
TRAV39-201ENST00000390466 LINC01554Q52M75 96 aa2□□□□□ -2.09
TRAV39-201ENST00000390466 IGKV2-30P06310 120 aa1.99□□□□□ -2.09
TRAV39-201ENST00000390466 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.99□□□□□ -2.09
TRAV39-201ENST00000390466 SPACA4Q8TDM5 124 aa1.99□□□□□ -2.09
TRAV39-201ENST00000390466 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.99□□□□□ -2.09
TRAV39-201ENST00000390466 CSMD3Q7Z407 3707 aa1.99□□□□□ -2.09
TRAV39-201ENST00000390466 DNAH5Q8TE73 4624 aa1.99□□□□□ -2.09
TRAV39-201ENST00000390466 IGHV6-1A0A0B4J1U7 121 aa1.98□□□□□ -2.09
TRAV39-201ENST00000390466 ZNF861PO60384 105 aa1.98□□□□□ -2.09
TRAV39-201ENST00000390466 PKHD1L1Q86WI1 4243 aa1.98□□□□□ -2.09
TRAV39-201ENST00000390466 ACYP2P14621 99 aa1.97□□□□□ -2.09
TRAV39-201ENST00000390466 C14orf177Q52M58 125 aa1.97□□□□□ -2.09
TRAV39-201ENST00000390466 APLNQ9ULZ1 77 aa1.97□□□□□ -2.09
TRAV39-201ENST00000390466 KMT2CQ8NEZ4 4911 aaKnown RBP1.96□□□□□ -2.1
TRAV39-201ENST00000390466 RYR3Q15413 4870 aa1.96□□□□□ -2.1
TRAV39-201ENST00000390466 STAB2Q8WWQ8 2551 aa1.96□□□□□ -2.1
TRAV39-201ENST00000390466 IGLV5-52A0A0A0MRZ9 124 aa1.96□□□□□ -2.1
TRAV39-201ENST00000390466 IGLV9-49A0A0B4J1Y8 123 aa1.96□□□□□ -2.1
TRAV39-201ENST00000390466 IGLV7-43P04211 117 aa1.96□□□□□ -2.1
TRAV39-201ENST00000390466 STARD9Q9P2P6 4700 aa1.95□□□□□ -2.1
TRAV39-201ENST00000390466 H3BS24 57 aa1.95□□□□□ -2.1
TRAV39-201ENST00000390466 MIR22HGQ0VDD5 57 aa1.95□□□□□ -2.1
TRAV39-201ENST00000390466 CSAG1Q6PB30 78 aa1.95□□□□□ -2.1
TRAV39-201ENST00000390466 ANAPC11Q9NYG5 84 aa1.95□□□□□ -2.1
TRAV39-201ENST00000390466 PSORS1C2Q9UIG4 136 aa1.95□□□□□ -2.1
TRAV39-201ENST00000390466 IGKV2D-30A0A075B6S6 120 aa1.94□□□□□ -2.1
TRAV39-201ENST00000390466 A0A1B0GU69 56 aa1.94□□□□□ -2.1
TRAV39-201ENST00000390466 A8MUU9 505 aa1.94□□□□□ -2.1
TRAV39-201ENST00000390466 H0YAA0 97 aa1.94□□□□□ -2.1
TRAV39-201ENST00000390466 ZNF706Q9Y5V0 76 aaPredicted RBP1.94□□□□□ -2.1
TRAV39-201ENST00000390466 NBDYA0A0U1RRE5 68 aa1.93□□□□□ -2.1
TRAV39-201ENST00000390466 UQCR11O14957 56 aa1.93□□□□□ -2.1
TRAV39-201ENST00000390466 KMT2AQ03164 3969 aa1.92□□□□□ -2.1
TRAV39-201ENST00000390466 CDK2AP2O75956 126 aa1.92□□□□□ -2.1
TRAV39-201ENST00000390466 KRTAP13-2Q52LG2 175 aa1.92□□□□□ -2.1
TRAV39-201ENST00000390466 A0A087WTM6 91 aa1.91□□□□□ -2.1
TRAV39-201ENST00000390466 LY6G6CO95867 125 aa1.91□□□□□ -2.1
TRAV39-201ENST00000390466 SPINK6Q6UWN8 80 aa1.91□□□□□ -2.1
TRAV39-201ENST00000390466 Q6ZSA8 131 aa1.91□□□□□ -2.1
TRAV39-201ENST00000390466 RETNLBQ9BQ08 111 aa1.91□□□□□ -2.1
TRAV39-201ENST00000390466 KRTAP9-3Q9BYQ3 159 aa1.91□□□□□ -2.1
TRAV39-201ENST00000390466 EPPK1P58107 5090 aaKnown RBP1.9□□□□□ -2.1
TRAV39-201ENST00000390466 LRP1BQ9NZR2 4599 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms