RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 CYSTM1Q9H1C7 97 aa7.86□□□□□ -1.15
PTPRN2-203ENST00000389418 Q6ZR54 194 aa7.86□□□□□ -1.15
PTPRN2-203ENST00000389418 Q5VSD8 79 aa7.84□□□□□ -1.15
PTPRN2-203ENST00000389418 Q1T7F1 81 aa7.83□□□□□ -1.16
PTPRN2-203ENST00000389418 HRES1P13985 223 aa7.82□□□□□ -1.16
PTPRN2-203ENST00000389418 NBPF19A0A087WUL8 3843 aa7.82□□□□□ -1.16
PTPRN2-203ENST00000389418 LINC00483Q53H64 154 aa7.81□□□□□ -1.16
PTPRN2-203ENST00000389418 LCA10Q71F78 164 aa7.81□□□□□ -1.16
PTPRN2-203ENST00000389418 CSMD2Q7Z408 3487 aa7.8□□□□□ -1.16
PTPRN2-203ENST00000389418 FP248Q71RG6 208 aaPredicted RBP7.79□□□□□ -1.16
PTPRN2-203ENST00000389418 KRTAP21-3Q3LHN1 58 aa7.79□□□□□ -1.16
PTPRN2-203ENST00000389418 A0A0D9SG42 100 aa7.78□□□□□ -1.16
PTPRN2-203ENST00000389418 SEC61BP60468 96 aaKnown RBP7.78□□□□□ -1.16
PTPRN2-203ENST00000389418 CDC42SE1Q9NRR8 79 aa7.78□□□□□ -1.16
PTPRN2-203ENST00000389418 CSMD1Q96PZ7 3565 aa7.76□□□□□ -1.17
PTPRN2-203ENST00000389418 KRTAP4-16G5E9R7 235 aaPredicted RBP7.76□□□□□ -1.17
PTPRN2-203ENST00000389418 M0R2T5 61 aa7.75□□□□□ -1.17
PTPRN2-203ENST00000389418 CSAG1Q6PB30 78 aa7.75□□□□□ -1.17
PTPRN2-203ENST00000389418 SPINT4Q6UDR6 99 aa7.75□□□□□ -1.17
PTPRN2-203ENST00000389418 Q8N9P0 234 aaPredicted RBP7.75□□□□□ -1.17
PTPRN2-203ENST00000389418 SVEP1Q4LDE5 3571 aa7.74□□□□□ -1.17
PTPRN2-203ENST00000389418 OXTP01178 125 aa7.72□□□□□ -1.17
PTPRN2-203ENST00000389418 Q5W150 140 aa7.72□□□□□ -1.17
PTPRN2-203ENST00000389418 A0A1B0GU33 70 aa7.71□□□□□ -1.17
PTPRN2-203ENST00000389418 SPINK7P58062 85 aa7.71□□□□□ -1.18
PTPRN2-203ENST00000389418 KRTAP11-1Q8IUC1 163 aa7.71□□□□□ -1.18
PTPRN2-203ENST00000389418 A0A087X002 238 aa7.7□□□□□ -1.18
PTPRN2-203ENST00000389418 LINC01558Q9Y6Z2 57 aa7.66□□□□□ -1.18
PTPRN2-203ENST00000389418 Q6ZRN7 208 aaPredicted RBP7.66□□□□□ -1.18
PTPRN2-203ENST00000389418 S4R3F8 94 aa7.65□□□□□ -1.18
PTPRN2-203ENST00000389418 Q75L30 129 aa7.65□□□□□ -1.18
PTPRN2-203ENST00000389418 RPS29P62273 56 aaKnown RBP7.63□□□□□ -1.19
PTPRN2-203ENST00000389418 CAMK2N1Q7Z7J9 78 aa7.63□□□□□ -1.19
PTPRN2-203ENST00000389418 DMAC1Q96GE9 116 aa7.62□□□□□ -1.19
PTPRN2-203ENST00000389418 ASB16-AS1Q495Z4 193 aa7.61□□□□□ -1.19
PTPRN2-203ENST00000389418 KRTAP7-1Q8IUC3 87 aa7.6□□□□□ -1.19
PTPRN2-203ENST00000389418 Q5VV11 94 aa7.57□□□□□ -1.2
PTPRN2-203ENST00000389418 KRTAP29-1A8MX34 341 aaPredicted RBP7.55□□□□□ -1.2
PTPRN2-203ENST00000389418 NOTCH2NLQ7Z3S9 236 aa7.53□□□□□ -1.2
PTPRN2-203ENST00000389418 R4GN34 69 aa7.52□□□□□ -1.21
PTPRN2-203ENST00000389418 KRTAP13-1Q8IUC0 172 aa7.47□□□□□ -1.21
PTPRN2-203ENST00000389418 PRAC1Q96KF2 57 aa7.46□□□□□ -1.22
PTPRN2-203ENST00000389418 SPENQ96T58 3664 aaKnown RBP7.45□□□□□ -1.22
PTPRN2-203ENST00000389418 LUZP6Q538Z0 58 aa7.42□□□□□ -1.22
PTPRN2-203ENST00000389418 H3BS24 57 aa7.41□□□□□ -1.22
PTPRN2-203ENST00000389418 KRTAP13-2Q52LG2 175 aa7.4□□□□□ -1.22
PTPRN2-203ENST00000389418 COL7A1Q02388 2944 aa7.4□□□□□ -1.22
PTPRN2-203ENST00000389418 RPL37P61927 97 aaKnown RBP7.39□□□□□ -1.23
PTPRN2-203ENST00000389418 FBN3Q75N90 2809 aa7.36□□□□□ -1.23
PTPRN2-203ENST00000389418 H1FX-AS1Q4G0G2 97 aa7.35□□□□□ -1.23
PTPRN2-203ENST00000389418 M0QZ58 72 aa7.33□□□□□ -1.24
PTPRN2-203ENST00000389418 TRRAPQ9Y4A5 3859 aa7.3□□□□□ -1.24
PTPRN2-203ENST00000389418 ADM2Q7Z4H4 148 aa7.26□□□□□ -1.25
PTPRN2-203ENST00000389418 ROMO1P60602 79 aa7.24□□□□□ -1.25
PTPRN2-203ENST00000389418 PLAC4Q8WY50 150 aa7.24□□□□□ -1.25
PTPRN2-203ENST00000389418 BSNQ9UPA5 3926 aa7.21□□□□□ -1.26
PTPRN2-203ENST00000389418 SPATA8Q6RVD6 105 aa7.2□□□□□ -1.26
PTPRN2-203ENST00000389418 A6NN06 94 aa7.18□□□□□ -1.26
PTPRN2-203ENST00000389418 A8MUU9 505 aa7.18□□□□□ -1.26
PTPRN2-203ENST00000389418 C20orf166-AS1Q96NR2 134 aa7.16□□□□□ -1.26
PTPRN2-203ENST00000389418 MEGF8Q7Z7M0 2845 aa7.11□□□□□ -1.27
PTPRN2-203ENST00000389418 A8MU10 97 aa7.1□□□□□ -1.27
PTPRN2-203ENST00000389418 KRTAP1-4P0C5Y4 121 aa7.1□□□□□ -1.27
PTPRN2-203ENST00000389418 ANK3Q12955 4377 aaKnown RBP7.07□□□□□ -1.28
PTPRN2-203ENST00000389418 A0A0A0MQY5 61 aa7.02□□□□□ -1.29
PTPRN2-203ENST00000389418 TPRXLQ17RH7 258 aa6.98□□□□□ -1.29
PTPRN2-203ENST00000389418 XP32Q5T750 250 aa6.97□□□□□ -1.29
PTPRN2-203ENST00000389418 A0A1B0GVY2 172 aa6.96□□□□□ -1.29
PTPRN2-203ENST00000389418 KRTAP25-1Q3LHN0 102 aa6.93□□□□□ -1.3
PTPRN2-203ENST00000389418 VPS13CQ709C8 3753 aa6.85□□□□□ -1.31
PTPRN2-203ENST00000389418 TNP1P09430 55 aa6.84□□□□□ -1.31
PTPRN2-203ENST00000389418 KRTAP16-1A8MUX0 517 aa6.84□□□□□ -1.31
PTPRN2-203ENST00000389418 KRTAP13-3Q3SY46 172 aa6.81□□□□□ -1.32
PTPRN2-203ENST00000389418 CSMD3Q7Z407 3707 aa6.79□□□□□ -1.32
PTPRN2-203ENST00000389418 KRTAP10-8P60410 259 aa6.79□□□□□ -1.32
PTPRN2-203ENST00000389418 ZNF469Q96JG9 3925 aaPredicted RBP6.73□□□□□ -1.33
PTPRN2-203ENST00000389418 PP632Q6XCG6 107 aa6.72□□□□□ -1.33
PTPRN2-203ENST00000389418 NDUFAF8A1L188 74 aa6.71□□□□□ -1.34
PTPRN2-203ENST00000389418 KRTAP10-10P60014 251 aa6.65□□□□□ -1.34
PTPRN2-203ENST00000389418 DNHD1Q96M86 4753 aa6.64□□□□□ -1.35
PTPRN2-203ENST00000389418 H0YAA0 97 aa6.63□□□□□ -1.35
PTPRN2-203ENST00000389418 AKAP9Q99996 3911 aa6.61□□□□□ -1.35
PTPRN2-203ENST00000389418 P0C880 135 aa6.58□□□□□ -1.36
PTPRN2-203ENST00000389418 PRO2289Q9P1D8 64 aa6.57□□□□□ -1.36
PTPRN2-203ENST00000389418 C10orf95Q9H7T3 257 aa6.53□□□□□ -1.36
PTPRN2-203ENST00000389418 KRTAP4-5Q9BYR2 181 aa6.48□□□□□ -1.37
PTPRN2-203ENST00000389418 HUWE1Q7Z6Z7 4374 aaKnown RBP6.47□□□□□ -1.37
PTPRN2-203ENST00000389418 KRTAP3-1Q9BYR8 98 aa6.35□□□□□ -1.39
PTPRN2-203ENST00000389418 DNAH9Q9NYC9 4486 aa6.33□□□□□ -1.4
PTPRN2-203ENST00000389418 MT1HL1P0DM35 61 aa6.32□□□□□ -1.4
PTPRN2-203ENST00000389418 KRTAP12-2P59991 146 aa6.24□□□□□ -1.41
PTPRN2-203ENST00000389418 KRTAP10-4P60372 401 aaPredicted RBP6.22□□□□□ -1.41
PTPRN2-203ENST00000389418 DNAH5Q8TE73 4624 aa6.2□□□□□ -1.42
PTPRN2-203ENST00000389418 KRTAP13-4Q3LI77 160 aa6.18□□□□□ -1.42
PTPRN2-203ENST00000389418 KRTAP12-1P59990 96 aa6.17□□□□□ -1.42
PTPRN2-203ENST00000389418 DNAH11Q96DT5 4516 aa6.14□□□□□ -1.43
PTPRN2-203ENST00000389418 PLECQ15149 4684 aaKnown RBP6.13□□□□□ -1.43
PTPRN2-203ENST00000389418 KRTAP10-6P60371 365 aaPredicted RBP6.12□□□□□ -1.43
PTPRN2-203ENST00000389418 ALMS1Q8TCU4 4167 aa6.12□□□□□ -1.43
PTPRN2-203ENST00000389418 FAT1Q14517 4588 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms