RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 H0Y9J4 135 aa9.25□□□□□ -0.93
CCHCR1-201ENST00000376266 C14orf177Q52M58 125 aa9.25□□□□□ -0.93
CCHCR1-201ENST00000376266 LINC00472Q9H8W2 130 aa9.25□□□□□ -0.93
CCHCR1-201ENST00000376266 C7orf65Q6ZTY9 151 aa9.23□□□□□ -0.93
CCHCR1-201ENST00000376266 LINC01558Q9Y6Z2 57 aa9.23□□□□□ -0.93
CCHCR1-201ENST00000376266 MOBPQ13875 183 aa9.23□□□□□ -0.93
CCHCR1-201ENST00000376266 HECTD4Q9Y4D8 3996 aa9.23□□□□□ -0.93
CCHCR1-201ENST00000376266 KRTAP10-2P60368 255 aa9.21□□□□□ -0.93
CCHCR1-201ENST00000376266 MMP24-AS1A0A0U1RRL7 71 aa9.21□□□□□ -0.94
CCHCR1-201ENST00000376266 DNAH5Q8TE73 4624 aa9.21□□□□□ -0.94
CCHCR1-201ENST00000376266 PKHD1P08F94 4074 aa9.19□□□□□ -0.94
CCHCR1-201ENST00000376266 IGKV2-24A0A0C4DH68 120 aa9.18□□□□□ -0.94
CCHCR1-201ENST00000376266 A0A096LNI7 61 aa9.18□□□□□ -0.94
CCHCR1-201ENST00000376266 IGLV5-52A0A0A0MRZ9 124 aa9.18□□□□□ -0.94
CCHCR1-201ENST00000376266 PLAC8Q9NZF1 115 aa9.18□□□□□ -0.94
CCHCR1-201ENST00000376266 SPINK7P58062 85 aa9.17□□□□□ -0.94
CCHCR1-201ENST00000376266 A0A1B0GVY2 172 aa9.17□□□□□ -0.94
CCHCR1-201ENST00000376266 TP53AIP1Q9HCN2 124 aa9.14□□□□□ -0.95
CCHCR1-201ENST00000376266 SRRM2Q9UQ35 2752 aaKnown RBP9.13□□□□□ -0.95
CCHCR1-201ENST00000376266 HRES1P13985 223 aa9.12□□□□□ -0.95
CCHCR1-201ENST00000376266 SPRR1BP22528 89 aa9.12□□□□□ -0.95
CCHCR1-201ENST00000376266 LRP1BQ9NZR2 4599 aa9.09□□□□□ -0.95
CCHCR1-201ENST00000376266 DYNC1H1Q14204 4646 aaKnown RBP9.08□□□□□ -0.96
CCHCR1-201ENST00000376266 CHTF8P0CG12 524 aa9.08□□□□□ -0.96
CCHCR1-201ENST00000376266 KRTAP10-1P60331 282 aa9.07□□□□□ -0.96
CCHCR1-201ENST00000376266 EPPK1P58107 5090 aaKnown RBP9.07□□□□□ -0.96
CCHCR1-201ENST00000376266 KRTAP11-1Q8IUC1 163 aa9.07□□□□□ -0.96
CCHCR1-201ENST00000376266 PANO1I0J062 215 aa9.06□□□□□ -0.96
CCHCR1-201ENST00000376266 ASB16-AS1Q495Z4 193 aa9.06□□□□□ -0.96
CCHCR1-201ENST00000376266 C8orf17Q9NRJ1 99 aa9.06□□□□□ -0.96
CCHCR1-201ENST00000376266 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.05□□□□□ -0.96
CCHCR1-201ENST00000376266 DNAH8Q96JB1 4490 aa9.04□□□□□ -0.96
CCHCR1-201ENST00000376266 Q96NJ1 140 aa9.02□□□□□ -0.96
CCHCR1-201ENST00000376266 IGHV6-1A0A0B4J1U7 121 aa9.02□□□□□ -0.97
CCHCR1-201ENST00000376266 LINC00313P59037 77 aa9.01□□□□□ -0.97
CCHCR1-201ENST00000376266 PRR26Q8N8Z3 221 aa9.01□□□□□ -0.97
CCHCR1-201ENST00000376266 C8orf87E5RJ46 101 aa9.01□□□□□ -0.97
CCHCR1-201ENST00000376266 SPACA4Q8TDM5 124 aa9.01□□□□□ -0.97
CCHCR1-201ENST00000376266 IGLV9-49A0A0B4J1Y8 123 aa8.99□□□□□ -0.97
CCHCR1-201ENST00000376266 PRAC1Q96KF2 57 aa8.99□□□□□ -0.97
CCHCR1-201ENST00000376266 Q6ZSA8 131 aa8.98□□□□□ -0.97
CCHCR1-201ENST00000376266 A0A1B0GVX0 72 aa8.97□□□□□ -0.97
CCHCR1-201ENST00000376266 MRPL34Q9BQ48 92 aaKnown RBP8.97□□□□□ -0.97
CCHCR1-201ENST00000376266 APOBP04114 4563 aaKnown RBP8.97□□□□□ -0.97
CCHCR1-201ENST00000376266 CDK2AP2O75956 126 aa8.97□□□□□ -0.97
CCHCR1-201ENST00000376266 CIRBP-AS1Q8TBR5 109 aa8.95□□□□□ -0.98
CCHCR1-201ENST00000376266 C4orf48Q5BLP8 95 aa8.91□□□□□ -0.98
CCHCR1-201ENST00000376266 ADM2Q7Z4H4 148 aa8.91□□□□□ -0.98
CCHCR1-201ENST00000376266 A0A087X002 238 aa8.9□□□□□ -0.98
CCHCR1-201ENST00000376266 NOTCH2NLQ7Z3S9 236 aa8.9□□□□□ -0.98
CCHCR1-201ENST00000376266 ACYP2P14621 99 aa8.89□□□□□ -0.99
CCHCR1-201ENST00000376266 PLA2G1BP04054 148 aaKnown RBP8.88□□□□□ -0.99
CCHCR1-201ENST00000376266 KRTAP13-1Q8IUC0 172 aa8.87□□□□□ -0.99
CCHCR1-201ENST00000376266 KIAA1109Q2LD37 5005 aa8.86□□□□□ -0.99
CCHCR1-201ENST00000376266 FAT1Q14517 4588 aa8.86□□□□□ -0.99
CCHCR1-201ENST00000376266 HSPG2P98160 4391 aa8.86□□□□□ -0.99
CCHCR1-201ENST00000376266 Q5W150 140 aa8.85□□□□□ -0.99
CCHCR1-201ENST00000376266 LINC01554Q52M75 96 aa8.85□□□□□ -0.99
CCHCR1-201ENST00000376266 SMR3BP02814 79 aaPredicted RBP8.84□□□□□ -0.99
CCHCR1-201ENST00000376266 A0A1B0GU69 56 aa8.83□□□□□ -1
CCHCR1-201ENST00000376266 RYR1P21817 5038 aa8.82□□□□□ -1
CCHCR1-201ENST00000376266 VPS13BQ7Z7G8 4022 aa8.8□□□□□ -1
CCHCR1-201ENST00000376266 SPATA8Q6RVD6 105 aa8.79□□□□□ -1
CCHCR1-201ENST00000376266 SPINK6Q6UWN8 80 aa8.79□□□□□ -1
CCHCR1-201ENST00000376266 BIRC6Q9NR09 4857 aa8.79□□□□□ -1
CCHCR1-201ENST00000376266 KRTAP13-3Q3SY46 172 aa8.79□□□□□ -1
CCHCR1-201ENST00000376266 LINC00483Q53H64 154 aa8.79□□□□□ -1
CCHCR1-201ENST00000376266 PSORS1C2Q9UIG4 136 aa8.79□□□□□ -1
CCHCR1-201ENST00000376266 DMAC1Q96GE9 116 aa8.77□□□□□ -1.01
CCHCR1-201ENST00000376266 ANAPC11Q9NYG5 84 aa8.75□□□□□ -1.01
CCHCR1-201ENST00000376266 MIR22HGQ0VDD5 57 aa8.75□□□□□ -1.01
CCHCR1-201ENST00000376266 ZNF706Q9Y5V0 76 aaPredicted RBP8.75□□□□□ -1.01
CCHCR1-201ENST00000376266 KRTAP17-1Q9BYP8 105 aa8.74□□□□□ -1.01
CCHCR1-201ENST00000376266 UQCR11O14957 56 aa8.72□□□□□ -1.01
CCHCR1-201ENST00000376266 H3BS24 57 aa8.7□□□□□ -1.02
CCHCR1-201ENST00000376266 FAM229AH3BQW9 127 aa8.69□□□□□ -1.02
CCHCR1-201ENST00000376266 Q5VSD8 79 aa8.68□□□□□ -1.02
CCHCR1-201ENST00000376266 IGLV7-43P04211 117 aa8.67□□□□□ -1.02
CCHCR1-201ENST00000376266 KRTAP10-4P60372 401 aaPredicted RBP8.67□□□□□ -1.02
CCHCR1-201ENST00000376266 RETNLBQ9BQ08 111 aa8.67□□□□□ -1.02
CCHCR1-201ENST00000376266 Q8N1X5 172 aa8.67□□□□□ -1.02
CCHCR1-201ENST00000376266 CSAG1Q6PB30 78 aa8.66□□□□□ -1.02
CCHCR1-201ENST00000376266 ZNF861PO60384 105 aa8.64□□□□□ -1.03
CCHCR1-201ENST00000376266 HERC2O95714 4834 aa8.62□□□□□ -1.03
CCHCR1-201ENST00000376266 IGKV2-30P06310 120 aa8.6□□□□□ -1.03
CCHCR1-201ENST00000376266 KRTAP4-5Q9BYR2 181 aa8.59□□□□□ -1.03
CCHCR1-201ENST00000376266 PKHD1L1Q86WI1 4243 aa8.52□□□□□ -1.05
CCHCR1-201ENST00000376266 IGKV2D-30A0A075B6S6 120 aa8.5□□□□□ -1.05
CCHCR1-201ENST00000376266 FLG2Q5D862 2391 aaPredicted RBP8.5□□□□□ -1.05
CCHCR1-201ENST00000376266 ABCA13Q86UQ4 5058 aa8.5□□□□□ -1.05
CCHCR1-201ENST00000376266 LRP1Q07954 4544 aaKnown RBP8.5□□□□□ -1.05
CCHCR1-201ENST00000376266 MYCBP2O75592 4640 aa8.49□□□□□ -1.05
CCHCR1-201ENST00000376266 KRTAP1-4P0C5Y4 121 aa8.48□□□□□ -1.05
CCHCR1-201ENST00000376266 SSBP3-AS1Q7Z2R9 100 aa8.46□□□□□ -1.05
CCHCR1-201ENST00000376266 SPINK1P00995 79 aa8.44□□□□□ -1.06
CCHCR1-201ENST00000376266 FAT3Q8TDW7 4589 aa8.43□□□□□ -1.06
CCHCR1-201ENST00000376266 KRTAP16-1A8MUX0 517 aa8.39□□□□□ -1.07
CCHCR1-201ENST00000376266 KRTAP13-2Q52LG2 175 aa8.38□□□□□ -1.07
CCHCR1-201ENST00000376266 PCLOQ9Y6V0 5065 aa8.36□□□□□ -1.07
CCHCR1-201ENST00000376266 TNXBP22105 4242 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms