RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 Q6ZR54 194 aa7.44□□□□□ -1.22
C9orf3-203ENST00000375315 DNAH1Q9P2D7 4330 aa7.44□□□□□ -1.22
C9orf3-203ENST00000375315 A0A096LNI7 61 aa7.43□□□□□ -1.22
C9orf3-203ENST00000375315 A0A087X002 238 aa7.42□□□□□ -1.22
C9orf3-203ENST00000375315 SRRM2Q9UQ35 2752 aaKnown RBP7.41□□□□□ -1.22
C9orf3-203ENST00000375315 PRR26Q8N8Z3 221 aa7.4□□□□□ -1.23
C9orf3-203ENST00000375315 C1orf134Q5TEV5 83 aa7.38□□□□□ -1.23
C9orf3-203ENST00000375315 PANO1I0J062 215 aa7.38□□□□□ -1.23
C9orf3-203ENST00000375315 RTL8CO15255 209 aa7.37□□□□□ -1.23
C9orf3-203ENST00000375315 Q6ZRN7 208 aaPredicted RBP7.37□□□□□ -1.23
C9orf3-203ENST00000375315 C8orf17Q9NRJ1 99 aa7.36□□□□□ -1.23
C9orf3-203ENST00000375315 A0A087WTM6 91 aa7.36□□□□□ -1.23
C9orf3-203ENST00000375315 SPRR1BP22528 89 aa7.36□□□□□ -1.23
C9orf3-203ENST00000375315 ACYP2P14621 99 aa7.34□□□□□ -1.24
C9orf3-203ENST00000375315 C14orf177Q52M58 125 aa7.34□□□□□ -1.24
C9orf3-203ENST00000375315 SPATA8Q6RVD6 105 aa7.33□□□□□ -1.24
C9orf3-203ENST00000375315 VPS13DQ5THJ4 4388 aa7.33□□□□□ -1.24
C9orf3-203ENST00000375315 RETNLBQ9BQ08 111 aa7.32□□□□□ -1.24
C9orf3-203ENST00000375315 A0A1B0GU69 56 aa7.32□□□□□ -1.24
C9orf3-203ENST00000375315 DYNC2H1Q8NCM8 4307 aaKnown RBP7.32□□□□□ -1.24
C9orf3-203ENST00000375315 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.32□□□□□ -1.24
C9orf3-203ENST00000375315 HYDINQ4G0P3 5121 aa7.31□□□□□ -1.24
C9orf3-203ENST00000375315 IGLV5-52A0A0A0MRZ9 124 aa7.3□□□□□ -1.24
C9orf3-203ENST00000375315 MRPL34Q9BQ48 92 aaKnown RBP7.3□□□□□ -1.24
C9orf3-203ENST00000375315 IGHV6-1A0A0B4J1U7 121 aa7.29□□□□□ -1.24
C9orf3-203ENST00000375315 CDK2AP2O75956 126 aa7.29□□□□□ -1.24
C9orf3-203ENST00000375315 KRTAP11-1Q8IUC1 163 aa7.29□□□□□ -1.24
C9orf3-203ENST00000375315 DNAH2Q9P225 4427 aa7.29□□□□□ -1.24
C9orf3-203ENST00000375315 MIR22HGQ0VDD5 57 aa7.28□□□□□ -1.24
C9orf3-203ENST00000375315 A0A1B0GVX0 72 aa7.28□□□□□ -1.24
C9orf3-203ENST00000375315 KRTAP10-2P60368 255 aa7.28□□□□□ -1.24
C9orf3-203ENST00000375315 CSAG1Q6PB30 78 aa7.28□□□□□ -1.24
C9orf3-203ENST00000375315 Q96NJ1 140 aa7.28□□□□□ -1.24
C9orf3-203ENST00000375315 UQCR11O14957 56 aa7.27□□□□□ -1.25
C9orf3-203ENST00000375315 DMAC1Q96GE9 116 aa7.21□□□□□ -1.26
C9orf3-203ENST00000375315 FRAS1Q86XX4 4008 aa7.19□□□□□ -1.26
C9orf3-203ENST00000375315 DNAH6Q9C0G6 4158 aa7.19□□□□□ -1.26
C9orf3-203ENST00000375315 IGLV9-49A0A0B4J1Y8 123 aa7.18□□□□□ -1.26
C9orf3-203ENST00000375315 SPACA4Q8TDM5 124 aa7.17□□□□□ -1.26
C9orf3-203ENST00000375315 Q5W150 140 aa7.16□□□□□ -1.26
C9orf3-203ENST00000375315 DNAH11Q96DT5 4516 aa7.16□□□□□ -1.26
C9orf3-203ENST00000375315 ANAPC11Q9NYG5 84 aa7.16□□□□□ -1.26
C9orf3-203ENST00000375315 HECTD4Q9Y4D8 3996 aa7.15□□□□□ -1.26
C9orf3-203ENST00000375315 NOTCH2NLQ7Z3S9 236 aa7.15□□□□□ -1.27
C9orf3-203ENST00000375315 KMT2CQ8NEZ4 4911 aaKnown RBP7.15□□□□□ -1.27
C9orf3-203ENST00000375315 KRTAP10-1P60331 282 aa7.14□□□□□ -1.27
C9orf3-203ENST00000375315 KRTAP13-3Q3SY46 172 aa7.14□□□□□ -1.27
C9orf3-203ENST00000375315 CIRBP-AS1Q8TBR5 109 aa7.13□□□□□ -1.27
C9orf3-203ENST00000375315 PSORS1C2Q9UIG4 136 aa7.13□□□□□ -1.27
C9orf3-203ENST00000375315 ZNF861PO60384 105 aa7.12□□□□□ -1.27
C9orf3-203ENST00000375315 ZNF706Q9Y5V0 76 aaPredicted RBP7.11□□□□□ -1.27
C9orf3-203ENST00000375315 SMR3BP02814 79 aaPredicted RBP7.1□□□□□ -1.27
C9orf3-203ENST00000375315 SACSQ9NZJ4 4579 aa7.1□□□□□ -1.27
C9orf3-203ENST00000375315 DNAH17Q9UFH2 4485 aa7.09□□□□□ -1.27
C9orf3-203ENST00000375315 KRTAP13-1Q8IUC0 172 aa7.08□□□□□ -1.28
C9orf3-203ENST00000375315 PKHD1P08F94 4074 aa7.07□□□□□ -1.28
C9orf3-203ENST00000375315 DNAH5Q8TE73 4624 aa7.05□□□□□ -1.28
C9orf3-203ENST00000375315 ROMO1P60602 79 aa7.05□□□□□ -1.28
C9orf3-203ENST00000375315 LINC00483Q53H64 154 aa7.05□□□□□ -1.28
C9orf3-203ENST00000375315 SPINK6Q6UWN8 80 aa7.05□□□□□ -1.28
C9orf3-203ENST00000375315 ALMS1Q8TCU4 4167 aa7.05□□□□□ -1.28
C9orf3-203ENST00000375315 FAM229AH3BQW9 127 aa7.03□□□□□ -1.28
C9orf3-203ENST00000375315 IGLV7-43P04211 117 aa7.03□□□□□ -1.28
C9orf3-203ENST00000375315 KRTAP25-1Q3LHN0 102 aa7.03□□□□□ -1.28
C9orf3-203ENST00000375315 FAT2Q9NYQ8 4349 aa7.02□□□□□ -1.29
C9orf3-203ENST00000375315 DNAH8Q96JB1 4490 aa7.01□□□□□ -1.29
C9orf3-203ENST00000375315 IGKV2-30P06310 120 aa7.01□□□□□ -1.29
C9orf3-203ENST00000375315 LRP1BQ9NZR2 4599 aa7□□□□□ -1.29
C9orf3-203ENST00000375315 PKD1P98161 4303 aa6.97□□□□□ -1.29
C9orf3-203ENST00000375315 RYR2Q92736 4967 aa6.96□□□□□ -1.3
C9orf3-203ENST00000375315 A8MUU9 505 aa6.94□□□□□ -1.3
C9orf3-203ENST00000375315 FLG2Q5D862 2391 aaPredicted RBP6.93□□□□□ -1.3
C9orf3-203ENST00000375315 RYR3Q15413 4870 aa6.93□□□□□ -1.3
C9orf3-203ENST00000375315 Q6ZSA8 131 aa6.92□□□□□ -1.3
C9orf3-203ENST00000375315 DYNC1H1Q14204 4646 aaKnown RBP6.91□□□□□ -1.3
C9orf3-203ENST00000375315 FAT1Q14517 4588 aa6.91□□□□□ -1.3
C9orf3-203ENST00000375315 LINC00304Q8N9R0 145 aa6.89□□□□□ -1.31
C9orf3-203ENST00000375315 IGKV2D-30A0A075B6S6 120 aa6.88□□□□□ -1.31
C9orf3-203ENST00000375315 VPS13BQ7Z7G8 4022 aa6.87□□□□□ -1.31
C9orf3-203ENST00000375315 A0A1B0GVY2 172 aa6.87□□□□□ -1.31
C9orf3-203ENST00000375315 SPINK1P00995 79 aa6.87□□□□□ -1.31
C9orf3-203ENST00000375315 H0YAA0 97 aa6.84□□□□□ -1.31
C9orf3-203ENST00000375315 P0C880 135 aa6.81□□□□□ -1.32
C9orf3-203ENST00000375315 DMBT1Q9UGM3 2413 aaPredicted RBP6.8□□□□□ -1.32
C9orf3-203ENST00000375315 SSBP3-AS1Q7Z2R9 100 aa6.79□□□□□ -1.32
C9orf3-203ENST00000375315 KRTAP13-2Q52LG2 175 aa6.78□□□□□ -1.32
C9orf3-203ENST00000375315 K7ERS5 55 aa6.77□□□□□ -1.33
C9orf3-203ENST00000375315 APOBP04114 4563 aaKnown RBP6.77□□□□□ -1.33
C9orf3-203ENST00000375315 A0A1B0GU33 70 aa6.77□□□□□ -1.33
C9orf3-203ENST00000375315 KIAA1109Q2LD37 5005 aa6.77□□□□□ -1.33
C9orf3-203ENST00000375315 KRTAP16-1A8MUX0 517 aa6.75□□□□□ -1.33
C9orf3-203ENST00000375315 TYMSOSQ8TAI1 123 aa6.75□□□□□ -1.33
C9orf3-203ENST00000375315 KRTAP1-4P0C5Y4 121 aa6.74□□□□□ -1.33
C9orf3-203ENST00000375315 CRIPTQ9P021 101 aa6.74□□□□□ -1.33
C9orf3-203ENST00000375315 EPPK1P58107 5090 aaKnown RBP6.73□□□□□ -1.33
C9orf3-203ENST00000375315 Q8N1X5 172 aa6.73□□□□□ -1.33
C9orf3-203ENST00000375315 H1FX-AS1Q4G0G2 97 aa6.71□□□□□ -1.34
C9orf3-203ENST00000375315 Q5VSD8 79 aa6.7□□□□□ -1.34
C9orf3-203ENST00000375315 SPINT4Q6UDR6 99 aa6.68□□□□□ -1.34
C9orf3-203ENST00000375315 KRTAP17-1Q9BYP8 105 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms