RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 PRR15LQ9BU68 103 aa11.03□□□□□ -0.64
RXRB-202ENST00000374685 MP68P56378 58 aa11.02□□□□□ -0.65
RXRB-202ENST00000374685 Q75L30 129 aa11.02□□□□□ -0.65
RXRB-202ENST00000374685 SPTSSBQ8NFR3 76 aa11.02□□□□□ -0.65
RXRB-202ENST00000374685 LOC101927531A0A1B0GV80 90 aa10.99□□□□□ -0.65
RXRB-202ENST00000374685 ZNF706Q9Y5V0 76 aaPredicted RBP10.97□□□□□ -0.65
RXRB-202ENST00000374685 IGLV7-43P04211 117 aa10.96□□□□□ -0.65
RXRB-202ENST00000374685 KRTAP10-1P60331 282 aa10.96□□□□□ -0.66
RXRB-202ENST00000374685 LINC00472Q9H8W2 130 aa10.95□□□□□ -0.66
RXRB-202ENST00000374685 H3BPC8 53 aa10.95□□□□□ -0.66
RXRB-202ENST00000374685 LRP1BQ9NZR2 4599 aa10.94□□□□□ -0.66
RXRB-202ENST00000374685 A6NED7 52 aa10.94□□□□□ -0.66
RXRB-202ENST00000374685 CDC42SE1Q9NRR8 79 aa10.93□□□□□ -0.66
RXRB-202ENST00000374685 LINC00483Q53H64 154 aa10.93□□□□□ -0.66
RXRB-202ENST00000374685 FAT2Q9NYQ8 4349 aa10.93□□□□□ -0.66
RXRB-202ENST00000374685 C7orf65Q6ZTY9 151 aa10.92□□□□□ -0.66
RXRB-202ENST00000374685 CASC2Q6XLA1 102 aa10.91□□□□□ -0.66
RXRB-202ENST00000374685 ALMS1Q8TCU4 4167 aa10.91□□□□□ -0.66
RXRB-202ENST00000374685 A8MWP4 228 aa10.9□□□□□ -0.66
RXRB-202ENST00000374685 SPINK6Q6UWN8 80 aa10.9□□□□□ -0.66
RXRB-202ENST00000374685 PKD1P98161 4303 aa10.88□□□□□ -0.67
RXRB-202ENST00000374685 KRTAP29-1A8MX34 341 aaPredicted RBP10.87□□□□□ -0.67
RXRB-202ENST00000374685 H0Y9P7 68 aa10.87□□□□□ -0.67
RXRB-202ENST00000374685 PKHD1P08F94 4074 aa10.87□□□□□ -0.67
RXRB-202ENST00000374685 IGHV6-1A0A0B4J1U7 121 aa10.85□□□□□ -0.67
RXRB-202ENST00000374685 COA5Q86WW8 74 aa10.84□□□□□ -0.67
RXRB-202ENST00000374685 Q96NJ1 140 aa10.84□□□□□ -0.67
RXRB-202ENST00000374685 C4orf48Q5BLP8 95 aa10.82□□□□□ -0.68
RXRB-202ENST00000374685 SACSQ9NZJ4 4579 aa10.81□□□□□ -0.68
RXRB-202ENST00000374685 KRTAP21-3Q3LHN1 58 aa10.81□□□□□ -0.68
RXRB-202ENST00000374685 CDK2AP2O75956 126 aa10.8□□□□□ -0.68
RXRB-202ENST00000374685 LINC01558Q9Y6Z2 57 aa10.8□□□□□ -0.68
RXRB-202ENST00000374685 A0A087X002 238 aa10.79□□□□□ -0.68
RXRB-202ENST00000374685 IGLV7-46A0A075B6I9 117 aa10.78□□□□□ -0.68
RXRB-202ENST00000374685 MMP24-AS1A0A0U1RRL7 71 aa10.78□□□□□ -0.68
RXRB-202ENST00000374685 VPS13BQ7Z7G8 4022 aa10.78□□□□□ -0.68
RXRB-202ENST00000374685 C8orf87E5RJ46 101 aa10.77□□□□□ -0.69
RXRB-202ENST00000374685 Q6ZSA8 131 aa10.76□□□□□ -0.69
RXRB-202ENST00000374685 NOTCH2NLQ7Z3S9 236 aa10.76□□□□□ -0.69
RXRB-202ENST00000374685 SMR3BP02814 79 aaPredicted RBP10.72□□□□□ -0.69
RXRB-202ENST00000374685 C8orf17Q9NRJ1 99 aa10.72□□□□□ -0.69
RXRB-202ENST00000374685 A0A1B0GVX0 72 aa10.7□□□□□ -0.7
RXRB-202ENST00000374685 KRTAP13-2Q52LG2 175 aa10.69□□□□□ -0.7
RXRB-202ENST00000374685 SPAG11AQ6PDA7 123 aa10.67□□□□□ -0.7
RXRB-202ENST00000374685 SPINK7P58062 85 aa10.66□□□□□ -0.7
RXRB-202ENST00000374685 SSBP3-AS1Q7Z2R9 100 aa10.64□□□□□ -0.71
RXRB-202ENST00000374685 PLA2G1BP04054 148 aaKnown RBP10.62□□□□□ -0.71
RXRB-202ENST00000374685 FAT1Q14517 4588 aa10.62□□□□□ -0.71
RXRB-202ENST00000374685 PCOTHQ58A44 107 aa10.62□□□□□ -0.71
RXRB-202ENST00000374685 DYNC1H1Q14204 4646 aaKnown RBP10.61□□□□□ -0.71
RXRB-202ENST00000374685 KMT2CQ8NEZ4 4911 aaKnown RBP10.61□□□□□ -0.71
RXRB-202ENST00000374685 LINC00313P59037 77 aa10.6□□□□□ -0.71
RXRB-202ENST00000374685 KRTAP1-4P0C5Y4 121 aa10.59□□□□□ -0.71
RXRB-202ENST00000374685 MRPL34Q9BQ48 92 aaKnown RBP10.59□□□□□ -0.71
RXRB-202ENST00000374685 RETNLBQ9BQ08 111 aa10.57□□□□□ -0.72
RXRB-202ENST00000374685 TYMSOSQ8TAI1 123 aa10.54□□□□□ -0.72
RXRB-202ENST00000374685 HRES1P13985 223 aa10.53□□□□□ -0.72
RXRB-202ENST00000374685 ASB16-AS1Q495Z4 193 aa10.52□□□□□ -0.73
RXRB-202ENST00000374685 PRAC1Q96KF2 57 aa10.52□□□□□ -0.73
RXRB-202ENST00000374685 PRR26Q8N8Z3 221 aa10.52□□□□□ -0.73
RXRB-202ENST00000374685 TP53AIP1Q9HCN2 124 aa10.51□□□□□ -0.73
RXRB-202ENST00000374685 LINC01554Q52M75 96 aa10.5□□□□□ -0.73
RXRB-202ENST00000374685 H3BS24 57 aa10.48□□□□□ -0.73
RXRB-202ENST00000374685 Q5W150 140 aa10.47□□□□□ -0.73
RXRB-202ENST00000374685 RYR2Q92736 4967 aa10.47□□□□□ -0.73
RXRB-202ENST00000374685 ADM2Q7Z4H4 148 aa10.43□□□□□ -0.74
RXRB-202ENST00000374685 APOBP04114 4563 aaKnown RBP10.42□□□□□ -0.74
RXRB-202ENST00000374685 A0A1B0GVY2 172 aa10.41□□□□□ -0.74
RXRB-202ENST00000374685 LINC00304Q8N9R0 145 aa10.36□□□□□ -0.75
RXRB-202ENST00000374685 SPINK1P00995 79 aa10.33□□□□□ -0.76
RXRB-202ENST00000374685 SPATA8Q6RVD6 105 aa10.29□□□□□ -0.76
RXRB-202ENST00000374685 FLG2Q5D862 2391 aaPredicted RBP10.27□□□□□ -0.77
RXRB-202ENST00000374685 RYR3Q15413 4870 aa10.26□□□□□ -0.77
RXRB-202ENST00000374685 KRTAP13-3Q3SY46 172 aa10.25□□□□□ -0.77
RXRB-202ENST00000374685 IGKV2D-30A0A075B6S6 120 aa10.25□□□□□ -0.77
RXRB-202ENST00000374685 C9orf92A6NGG3 77 aa10.25□□□□□ -0.77
RXRB-202ENST00000374685 IGKV2-30P06310 120 aa10.25□□□□□ -0.77
RXRB-202ENST00000374685 KRTAP16-1A8MUX0 517 aa10.24□□□□□ -0.77
RXRB-202ENST00000374685 FAM229AH3BQW9 127 aa10.23□□□□□ -0.77
RXRB-202ENST00000374685 ACYP2P14621 99 aa10.23□□□□□ -0.77
RXRB-202ENST00000374685 KRTAP10-4P60372 401 aaPredicted RBP10.23□□□□□ -0.77
RXRB-202ENST00000374685 LRP1Q07954 4544 aaKnown RBP10.21□□□□□ -0.77
RXRB-202ENST00000374685 DMBT1Q9UGM3 2413 aaPredicted RBP10.19□□□□□ -0.78
RXRB-202ENST00000374685 A0A1B0GU69 56 aa10.18□□□□□ -0.78
RXRB-202ENST00000374685 MIR22HGQ0VDD5 57 aa10.14□□□□□ -0.79
RXRB-202ENST00000374685 CSAG1Q6PB30 78 aa10.14□□□□□ -0.79
RXRB-202ENST00000374685 DMAC1Q96GE9 116 aa10.13□□□□□ -0.79
RXRB-202ENST00000374685 PKHD1L1Q86WI1 4243 aa10.12□□□□□ -0.79
RXRB-202ENST00000374685 UQCR11O14957 56 aa10.11□□□□□ -0.79
RXRB-202ENST00000374685 HSPG2P98160 4391 aa10.09□□□□□ -0.79
RXRB-202ENST00000374685 Q5VSD8 79 aa10.08□□□□□ -0.8
RXRB-202ENST00000374685 KIAA1109Q2LD37 5005 aa10.07□□□□□ -0.8
RXRB-202ENST00000374685 RPS29P62273 56 aaKnown RBP10.03□□□□□ -0.8
RXRB-202ENST00000374685 Q8N1X5 172 aa10.03□□□□□ -0.8
RXRB-202ENST00000374685 MYCBP2O75592 4640 aa10□□□□□ -0.81
RXRB-202ENST00000374685 KRTAP17-1Q9BYP8 105 aa9.97□□□□□ -0.81
RXRB-202ENST00000374685 RYR1P21817 5038 aa9.96□□□□□ -0.82
RXRB-202ENST00000374685 EPPK1P58107 5090 aaKnown RBP9.93□□□□□ -0.82
RXRB-202ENST00000374685 TNXBP22105 4242 aa9.92□□□□□ -0.82
RXRB-202ENST00000374685 FAT3Q8TDW7 4589 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms