RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 LINC01558Q9Y6Z2 57 aa4.01□□□□□ -1.77
PTPN3-202ENST00000374541 A0A1B0GU33 70 aa4.01□□□□□ -1.77
PTPN3-202ENST00000374541 H3BS24 57 aa4□□□□□ -1.77
PTPN3-202ENST00000374541 DNHD1Q96M86 4753 aa4□□□□□ -1.77
PTPN3-202ENST00000374541 A0A0D9SG42 100 aa4□□□□□ -1.77
PTPN3-202ENST00000374541 ASB16-AS1Q495Z4 193 aa3.99□□□□□ -1.77
PTPN3-202ENST00000374541 EIF4EBP3O60516 100 aaPredicted RBP3.99□□□□□ -1.77
PTPN3-202ENST00000374541 Q8N1X5 172 aa3.99□□□□□ -1.77
PTPN3-202ENST00000374541 CAMK2N1Q7Z7J9 78 aa3.98□□□□□ -1.77
PTPN3-202ENST00000374541 LYSTQ99698 3801 aa3.97□□□□□ -1.77
PTPN3-202ENST00000374541 DNAH3Q8TD57 4116 aa3.96□□□□□ -1.77
PTPN3-202ENST00000374541 KRTAP10-1P60331 282 aa3.96□□□□□ -1.78
PTPN3-202ENST00000374541 KRTAP10-2P60368 255 aa3.96□□□□□ -1.78
PTPN3-202ENST00000374541 HRES1P13985 223 aa3.95□□□□□ -1.78
PTPN3-202ENST00000374541 ANAPC11Q9NYG5 84 aa3.95□□□□□ -1.78
PTPN3-202ENST00000374541 DMBT1Q9UGM3 2413 aaPredicted RBP3.95□□□□□ -1.78
PTPN3-202ENST00000374541 FAM229BQ4G0N7 80 aa3.95□□□□□ -1.78
PTPN3-202ENST00000374541 Q8N9P0 234 aaPredicted RBP3.95□□□□□ -1.78
PTPN3-202ENST00000374541 GIG44P09565 113 aaPredicted RBP3.95□□□□□ -1.78
PTPN3-202ENST00000374541 A0A1W2PNN7 141 aa3.93□□□□□ -1.78
PTPN3-202ENST00000374541 STAB2Q8WWQ8 2551 aa3.92□□□□□ -1.78
PTPN3-202ENST00000374541 Q5XG85 94 aa3.92□□□□□ -1.78
PTPN3-202ENST00000374541 CSAG1Q6PB30 78 aa3.92□□□□□ -1.78
PTPN3-202ENST00000374541 A0A0G2JQZ4 141 aa3.92□□□□□ -1.78
PTPN3-202ENST00000374541 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.92□□□□□ -1.78
PTPN3-202ENST00000374541 ZCCHC13Q8WW36 166 aaKnown RBP3.91□□□□□ -1.78
PTPN3-202ENST00000374541 MMP24-AS1A0A0U1RRL7 71 aa3.9□□□□□ -1.78
PTPN3-202ENST00000374541 NBEAL2Q6ZNJ1 2754 aa3.9□□□□□ -1.79
PTPN3-202ENST00000374541 Q5VV11 94 aa3.89□□□□□ -1.79
PTPN3-202ENST00000374541 TENM3Q9P273 2699 aa3.89□□□□□ -1.79
PTPN3-202ENST00000374541 S4R3F8 94 aa3.88□□□□□ -1.79
PTPN3-202ENST00000374541 DNAH7Q8WXX0 4024 aa3.88□□□□□ -1.79
PTPN3-202ENST00000374541 SPRR1BP22528 89 aa3.88□□□□□ -1.79
PTPN3-202ENST00000374541 FP248Q71RG6 208 aaPredicted RBP3.87□□□□□ -1.79
PTPN3-202ENST00000374541 SPINK7P58062 85 aa3.87□□□□□ -1.79
PTPN3-202ENST00000374541 TENM2Q9NT68 2774 aa3.87□□□□□ -1.79
PTPN3-202ENST00000374541 ROMO1P60602 79 aa3.87□□□□□ -1.79
PTPN3-202ENST00000374541 PRAC1Q96KF2 57 aa3.86□□□□□ -1.79
PTPN3-202ENST00000374541 PLAC8Q9NZF1 115 aa3.86□□□□□ -1.79
PTPN3-202ENST00000374541 RPL37P61927 97 aaKnown RBP3.86□□□□□ -1.79
PTPN3-202ENST00000374541 SPRR1AP35321 89 aa3.85□□□□□ -1.79
PTPN3-202ENST00000374541 Q6ZR54 194 aa3.85□□□□□ -1.79
PTPN3-202ENST00000374541 Q5W150 140 aa3.84□□□□□ -1.79
PTPN3-202ENST00000374541 FLG2Q5D862 2391 aaPredicted RBP3.83□□□□□ -1.8
PTPN3-202ENST00000374541 R4GN34 69 aa3.83□□□□□ -1.8
PTPN3-202ENST00000374541 KRTAP16-1A8MUX0 517 aa3.83□□□□□ -1.8
PTPN3-202ENST00000374541 LINC00472Q9H8W2 130 aa3.83□□□□□ -1.8
PTPN3-202ENST00000374541 DNAH1Q9P2D7 4330 aa3.82□□□□□ -1.8
PTPN3-202ENST00000374541 PRKDCP78527 4128 aaKnown RBP3.81□□□□□ -1.8
PTPN3-202ENST00000374541 MEGF8Q7Z7M0 2845 aa3.81□□□□□ -1.8
PTPN3-202ENST00000374541 KRTAP1-5Q9BYS1 174 aa3.81□□□□□ -1.8
PTPN3-202ENST00000374541 H1FX-AS1Q4G0G2 97 aa3.8□□□□□ -1.8
PTPN3-202ENST00000374541 FBN3Q75N90 2809 aa3.8□□□□□ -1.8
PTPN3-202ENST00000374541 DNAH9Q9NYC9 4486 aa3.79□□□□□ -1.8
PTPN3-202ENST00000374541 A0A087X002 238 aa3.78□□□□□ -1.8
PTPN3-202ENST00000374541 CYSTM1Q9H1C7 97 aa3.75□□□□□ -1.81
PTPN3-202ENST00000374541 DNAH10Q8IVF4 4471 aa3.75□□□□□ -1.81
PTPN3-202ENST00000374541 SPATA8Q6RVD6 105 aa3.74□□□□□ -1.81
PTPN3-202ENST00000374541 M0QZ58 72 aa3.73□□□□□ -1.81
PTPN3-202ENST00000374541 KRTAP26-1Q6PEX3 210 aa3.73□□□□□ -1.81
PTPN3-202ENST00000374541 PLAC4Q8WY50 150 aa3.72□□□□□ -1.81
PTPN3-202ENST00000374541 STARD9Q9P2P6 4700 aa3.71□□□□□ -1.82
PTPN3-202ENST00000374541 KRTAP29-1A8MX34 341 aaPredicted RBP3.7□□□□□ -1.82
PTPN3-202ENST00000374541 FRAS1Q86XX4 4008 aa3.7□□□□□ -1.82
PTPN3-202ENST00000374541 KRTAP25-1Q3LHN0 102 aa3.69□□□□□ -1.82
PTPN3-202ENST00000374541 PLECQ15149 4684 aaKnown RBP3.69□□□□□ -1.82
PTPN3-202ENST00000374541 HYDINQ4G0P3 5121 aa3.69□□□□□ -1.82
PTPN3-202ENST00000374541 Q8NDZ9 215 aa3.69□□□□□ -1.82
PTPN3-202ENST00000374541 A6NN06 94 aa3.69□□□□□ -1.82
PTPN3-202ENST00000374541 PANO1I0J062 215 aa3.69□□□□□ -1.82
PTPN3-202ENST00000374541 TGP01266 2768 aa3.68□□□□□ -1.82
PTPN3-202ENST00000374541 DYNC2H1Q8NCM8 4307 aaKnown RBP3.67□□□□□ -1.82
PTPN3-202ENST00000374541 HUWE1Q7Z6Z7 4374 aaKnown RBP3.66□□□□□ -1.82
PTPN3-202ENST00000374541 RPS29P62273 56 aaKnown RBP3.66□□□□□ -1.82
PTPN3-202ENST00000374541 ADM2Q7Z4H4 148 aa3.66□□□□□ -1.82
PTPN3-202ENST00000374541 DNAH2Q9P225 4427 aa3.66□□□□□ -1.82
PTPN3-202ENST00000374541 KMT2AQ03164 3969 aa3.65□□□□□ -1.83
PTPN3-202ENST00000374541 KMT2CQ8NEZ4 4911 aaKnown RBP3.64□□□□□ -1.83
PTPN3-202ENST00000374541 KRTAP4-16G5E9R7 235 aaPredicted RBP3.63□□□□□ -1.83
PTPN3-202ENST00000374541 Q6ZRN7 208 aaPredicted RBP3.61□□□□□ -1.83
PTPN3-202ENST00000374541 C20orf166-AS1Q96NR2 134 aa3.61□□□□□ -1.83
PTPN3-202ENST00000374541 SRRM2Q9UQ35 2752 aaKnown RBP3.61□□□□□ -1.83
PTPN3-202ENST00000374541 FAT2Q9NYQ8 4349 aa3.61□□□□□ -1.83
PTPN3-202ENST00000374541 VPS13DQ5THJ4 4388 aa3.6□□□□□ -1.83
PTPN3-202ENST00000374541 HECTD4Q9Y4D8 3996 aa3.59□□□□□ -1.83
PTPN3-202ENST00000374541 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
PTPN3-202ENST00000374541 DNAH6Q9C0G6 4158 aa3.57□□□□□ -1.84
PTPN3-202ENST00000374541 PP632Q6XCG6 107 aa3.56□□□□□ -1.84
PTPN3-202ENST00000374541 A8MUU9 505 aa3.55□□□□□ -1.84
PTPN3-202ENST00000374541 TNP1P09430 55 aa3.54□□□□□ -1.84
PTPN3-202ENST00000374541 PKHD1P08F94 4074 aa3.54□□□□□ -1.84
PTPN3-202ENST00000374541 PKD1P98161 4303 aa3.54□□□□□ -1.84
PTPN3-202ENST00000374541 RYR3Q15413 4870 aa3.54□□□□□ -1.84
PTPN3-202ENST00000374541 DNAH11Q96DT5 4516 aa3.53□□□□□ -1.84
PTPN3-202ENST00000374541 NOTCH2NLQ7Z3S9 236 aa3.53□□□□□ -1.84
PTPN3-202ENST00000374541 A0A1B0GVY2 172 aa3.52□□□□□ -1.85
PTPN3-202ENST00000374541 A8MU10 97 aa3.52□□□□□ -1.85
PTPN3-202ENST00000374541 KRTAP11-1Q8IUC1 163 aa3.51□□□□□ -1.85
PTPN3-202ENST00000374541 KRTAP10-10P60014 251 aa3.51□□□□□ -1.85
PTPN3-202ENST00000374541 DNAH8Q96JB1 4490 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms