RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 A0A087X002 238 aa8.06□□□□□ -1.12
CLIC4-201ENST00000374379 NOTCH2NLQ7Z3S9 236 aa8.06□□□□□ -1.12
CLIC4-201ENST00000374379 Q5XG85 94 aa8.06□□□□□ -1.12
CLIC4-201ENST00000374379 SVIPQ8NHG7 77 aa8.04□□□□□ -1.12
CLIC4-201ENST00000374379 COL7A1Q02388 2944 aa8.03□□□□□ -1.12
CLIC4-201ENST00000374379 Q8N9P0 234 aaPredicted RBP8.02□□□□□ -1.13
CLIC4-201ENST00000374379 KRTAP29-1A8MX34 341 aaPredicted RBP8.01□□□□□ -1.13
CLIC4-201ENST00000374379 KRTAP13-1Q8IUC0 172 aa8.01□□□□□ -1.13
CLIC4-201ENST00000374379 LINC00483Q53H64 154 aa8.01□□□□□ -1.13
CLIC4-201ENST00000374379 CD164Q04900 197 aa7.99□□□□□ -1.13
CLIC4-201ENST00000374379 A0A1B0GU69 56 aa7.98□□□□□ -1.13
CLIC4-201ENST00000374379 SPANXA2-OT1Q8N9U9 137 aa7.97□□□□□ -1.13
CLIC4-201ENST00000374379 Q8N1X5 172 aa7.97□□□□□ -1.13
CLIC4-201ENST00000374379 CYP4F30PQ9H0H9 118 aa7.94□□□□□ -1.14
CLIC4-201ENST00000374379 MEGF8Q7Z7M0 2845 aa7.94□□□□□ -1.14
CLIC4-201ENST00000374379 IGLV7-46A0A075B6I9 117 aa7.93□□□□□ -1.14
CLIC4-201ENST00000374379 HRES1P13985 223 aa7.92□□□□□ -1.14
CLIC4-201ENST00000374379 ZCCHC13Q8WW36 166 aaKnown RBP7.91□□□□□ -1.14
CLIC4-201ENST00000374379 Q5W150 140 aa7.89□□□□□ -1.15
CLIC4-201ENST00000374379 KRTAP13-2Q52LG2 175 aa7.87□□□□□ -1.15
CLIC4-201ENST00000374379 LCE6AA0A183 80 aa7.85□□□□□ -1.15
CLIC4-201ENST00000374379 Q1T7F1 81 aa7.85□□□□□ -1.15
CLIC4-201ENST00000374379 ATP11AUNQ6ZP68 121 aa7.84□□□□□ -1.15
CLIC4-201ENST00000374379 HUWE1Q7Z6Z7 4374 aaKnown RBP7.82□□□□□ -1.16
CLIC4-201ENST00000374379 Q5VV11 94 aa7.75□□□□□ -1.17
CLIC4-201ENST00000374379 K7ERS5 55 aa7.74□□□□□ -1.17
CLIC4-201ENST00000374379 UQCR11O14957 56 aa7.71□□□□□ -1.18
CLIC4-201ENST00000374379 Q5VSD8 79 aa7.69□□□□□ -1.18
CLIC4-201ENST00000374379 SPINK7P58062 85 aa7.69□□□□□ -1.18
CLIC4-201ENST00000374379 MIR22HGQ0VDD5 57 aa7.68□□□□□ -1.18
CLIC4-201ENST00000374379 Q6ZSA8 131 aa7.68□□□□□ -1.18
CLIC4-201ENST00000374379 LINC01558Q9Y6Z2 57 aa7.66□□□□□ -1.18
CLIC4-201ENST00000374379 A8MU10 97 aa7.65□□□□□ -1.18
CLIC4-201ENST00000374379 KRTAP1-4P0C5Y4 121 aa7.65□□□□□ -1.18
CLIC4-201ENST00000374379 ANK2Q01484 3957 aa7.65□□□□□ -1.19
CLIC4-201ENST00000374379 Q75L30 129 aa7.64□□□□□ -1.19
CLIC4-201ENST00000374379 CDC42SE1Q9NRR8 79 aa7.63□□□□□ -1.19
CLIC4-201ENST00000374379 DNAH10Q8IVF4 4471 aa7.63□□□□□ -1.19
CLIC4-201ENST00000374379 J3QL48 77 aa7.62□□□□□ -1.19
CLIC4-201ENST00000374379 ASB16-AS1Q495Z4 193 aa7.62□□□□□ -1.19
CLIC4-201ENST00000374379 DMAC1Q96GE9 116 aa7.61□□□□□ -1.19
CLIC4-201ENST00000374379 DNAH9Q9NYC9 4486 aa7.59□□□□□ -1.19
CLIC4-201ENST00000374379 PLECQ15149 4684 aaKnown RBP7.56□□□□□ -1.2
CLIC4-201ENST00000374379 KRTAP21-3Q3LHN1 58 aa7.54□□□□□ -1.2
CLIC4-201ENST00000374379 A0A0D9SG42 100 aa7.54□□□□□ -1.2
CLIC4-201ENST00000374379 LCA10Q71F78 164 aa7.53□□□□□ -1.2
CLIC4-201ENST00000374379 DNHD1Q96M86 4753 aa7.49□□□□□ -1.21
CLIC4-201ENST00000374379 KTN1-AS1Q86SY8 53 aa7.48□□□□□ -1.21
CLIC4-201ENST00000374379 A0A1B0GU33 70 aa7.46□□□□□ -1.22
CLIC4-201ENST00000374379 PRAC1Q96KF2 57 aa7.43□□□□□ -1.22
CLIC4-201ENST00000374379 LYSTQ99698 3801 aa7.43□□□□□ -1.22
CLIC4-201ENST00000374379 PRKDCP78527 4128 aaKnown RBP7.42□□□□□ -1.22
CLIC4-201ENST00000374379 LINC01554Q52M75 96 aa7.42□□□□□ -1.22
CLIC4-201ENST00000374379 STARD9Q9P2P6 4700 aa7.41□□□□□ -1.22
CLIC4-201ENST00000374379 COX6B2Q6YFQ2 88 aa7.4□□□□□ -1.22
CLIC4-201ENST00000374379 RBM12B-AS1Q9P1G2 102 aa7.4□□□□□ -1.22
CLIC4-201ENST00000374379 KRTAP16-1A8MUX0 517 aa7.4□□□□□ -1.22
CLIC4-201ENST00000374379 RPS29P62273 56 aaKnown RBP7.39□□□□□ -1.23
CLIC4-201ENST00000374379 DNAH1Q9P2D7 4330 aa7.36□□□□□ -1.23
CLIC4-201ENST00000374379 SPATA8Q6RVD6 105 aa7.36□□□□□ -1.23
CLIC4-201ENST00000374379 SPINT4Q6UDR6 99 aa7.36□□□□□ -1.23
CLIC4-201ENST00000374379 DNAH11Q96DT5 4516 aa7.34□□□□□ -1.23
CLIC4-201ENST00000374379 S4R3F8 94 aa7.33□□□□□ -1.24
CLIC4-201ENST00000374379 KRTAP13-3Q3SY46 172 aa7.31□□□□□ -1.24
CLIC4-201ENST00000374379 CRIPTQ9P021 101 aa7.31□□□□□ -1.24
CLIC4-201ENST00000374379 A8MUU9 505 aa7.31□□□□□ -1.24
CLIC4-201ENST00000374379 A0A1B0GVY2 172 aa7.3□□□□□ -1.24
CLIC4-201ENST00000374379 KMT2AQ03164 3969 aa7.3□□□□□ -1.24
CLIC4-201ENST00000374379 C20orf166-AS1Q96NR2 134 aa7.29□□□□□ -1.24
CLIC4-201ENST00000374379 CMYA5Q8N3K9 4069 aa7.29□□□□□ -1.24
CLIC4-201ENST00000374379 H1FX-AS1Q4G0G2 97 aa7.23□□□□□ -1.25
CLIC4-201ENST00000374379 CSAG1Q6PB30 78 aa7.23□□□□□ -1.25
CLIC4-201ENST00000374379 ADM2Q7Z4H4 148 aa7.22□□□□□ -1.25
CLIC4-201ENST00000374379 VPS13DQ5THJ4 4388 aa7.21□□□□□ -1.25
CLIC4-201ENST00000374379 RPL37P61927 97 aaKnown RBP7.21□□□□□ -1.25
CLIC4-201ENST00000374379 DNAH7Q8WXX0 4024 aa7.21□□□□□ -1.26
CLIC4-201ENST00000374379 DNAH3Q8TD57 4116 aa7.19□□□□□ -1.26
CLIC4-201ENST00000374379 A6NN06 94 aa7.19□□□□□ -1.26
CLIC4-201ENST00000374379 XP32Q5T750 250 aa7.18□□□□□ -1.26
CLIC4-201ENST00000374379 DNAH5Q8TE73 4624 aa7.16□□□□□ -1.26
CLIC4-201ENST00000374379 SEC61BP60468 96 aaKnown RBP7.13□□□□□ -1.27
CLIC4-201ENST00000374379 FAT1Q14517 4588 aa7.12□□□□□ -1.27
CLIC4-201ENST00000374379 LRP1BQ9NZR2 4599 aa7.11□□□□□ -1.27
CLIC4-201ENST00000374379 KRTAP10-8P60410 259 aa7.09□□□□□ -1.27
CLIC4-201ENST00000374379 DNAH8Q96JB1 4490 aa7.09□□□□□ -1.27
CLIC4-201ENST00000374379 DNAH17Q9UFH2 4485 aa7.08□□□□□ -1.28
CLIC4-201ENST00000374379 R4GN34 69 aa7.08□□□□□ -1.28
CLIC4-201ENST00000374379 FRAS1Q86XX4 4008 aa7.06□□□□□ -1.28
CLIC4-201ENST00000374379 DNAH2Q9P225 4427 aa7.05□□□□□ -1.28
CLIC4-201ENST00000374379 M0QZ58 72 aa7.04□□□□□ -1.28
CLIC4-201ENST00000374379 DNAH6Q9C0G6 4158 aa7.01□□□□□ -1.29
CLIC4-201ENST00000374379 H0YAA0 97 aa7.01□□□□□ -1.29
CLIC4-201ENST00000374379 M0R2T5 61 aa7□□□□□ -1.29
CLIC4-201ENST00000374379 KRTAP3-1Q9BYR8 98 aa6.99□□□□□ -1.29
CLIC4-201ENST00000374379 KRTAP10-4P60372 401 aaPredicted RBP6.98□□□□□ -1.29
CLIC4-201ENST00000374379 CAMK2N1Q7Z7J9 78 aa6.97□□□□□ -1.29
CLIC4-201ENST00000374379 DYNC1H1Q14204 4646 aaKnown RBP6.96□□□□□ -1.29
CLIC4-201ENST00000374379 ROMO1P60602 79 aa6.94□□□□□ -1.3
CLIC4-201ENST00000374379 DYNC2H1Q8NCM8 4307 aaKnown RBP6.94□□□□□ -1.3
CLIC4-201ENST00000374379 HYDINQ4G0P3 5121 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms