RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 A0A1B0GVX0 72 aa5.2□□□□□ -1.58
SNRNP40-202ENST00000373720 RPS29P62273 56 aaKnown RBP5.2□□□□□ -1.58
SNRNP40-202ENST00000373720 SPANXA2-OT1Q8N9U9 137 aa5.2□□□□□ -1.58
SNRNP40-202ENST00000373720 ZCCHC13Q8WW36 166 aaKnown RBP5.2□□□□□ -1.58
SNRNP40-202ENST00000373720 LYSTQ99698 3801 aa5.2□□□□□ -1.58
SNRNP40-202ENST00000373720 STARD9Q9P2P6 4700 aa5.2□□□□□ -1.58
SNRNP40-202ENST00000373720 Q96NJ1 140 aa5.19□□□□□ -1.58
SNRNP40-202ENST00000373720 DNAH10Q8IVF4 4471 aa5.19□□□□□ -1.58
SNRNP40-202ENST00000373720 SPINK6Q6UWN8 80 aa5.18□□□□□ -1.58
SNRNP40-202ENST00000373720 FAM30AQ9NZY2 134 aa5.18□□□□□ -1.58
SNRNP40-202ENST00000373720 SNURFQ9Y675 71 aa5.18□□□□□ -1.58
SNRNP40-202ENST00000373720 SMIM26A0A096LP01 95 aa5.17□□□□□ -1.58
SNRNP40-202ENST00000373720 TRAV22A0A0B4J277 110 aa5.17□□□□□ -1.58
SNRNP40-202ENST00000373720 MMP24-AS1A0A0U1RRL7 71 aa5.17□□□□□ -1.58
SNRNP40-202ENST00000373720 SPAG11AQ6PDA7 123 aa5.17□□□□□ -1.58
SNRNP40-202ENST00000373720 CYP4F30PQ9H0H9 118 aa5.17□□□□□ -1.58
SNRNP40-202ENST00000373720 CYSTM1Q9H1C7 97 aa5.17□□□□□ -1.58
SNRNP40-202ENST00000373720 C8orf17Q9NRJ1 99 aa5.17□□□□□ -1.58
SNRNP40-202ENST00000373720 KRTAP10-1P60331 282 aa5.16□□□□□ -1.58
SNRNP40-202ENST00000373720 SPINK1P00995 79 aa5.15□□□□□ -1.59
SNRNP40-202ENST00000373720 WFDC13Q8IUB5 93 aa5.15□□□□□ -1.59
SNRNP40-202ENST00000373720 MRPL34Q9BQ48 92 aaKnown RBP5.15□□□□□ -1.59
SNRNP40-202ENST00000373720 A0A0G2JQZ4 141 aa5.14□□□□□ -1.59
SNRNP40-202ENST00000373720 DEFB116Q30KQ4 102 aa5.14□□□□□ -1.59
SNRNP40-202ENST00000373720 TGP01266 2768 aa5.14□□□□□ -1.59
SNRNP40-202ENST00000373720 ALMS1Q8TCU4 4167 aa5.13□□□□□ -1.59
SNRNP40-202ENST00000373720 H0Y9P7 68 aa5.13□□□□□ -1.59
SNRNP40-202ENST00000373720 DNAH17Q9UFH2 4485 aa5.13□□□□□ -1.59
SNRNP40-202ENST00000373720 HECTD4Q9Y4D8 3996 aa5.12□□□□□ -1.59
SNRNP40-202ENST00000373720 DNAH2Q9P225 4427 aa5.11□□□□□ -1.59
SNRNP40-202ENST00000373720 C1orf64Q8NEQ6 169 aa5.11□□□□□ -1.59
SNRNP40-202ENST00000373720 LINC00208Q96KT6 92 aa5.11□□□□□ -1.59
SNRNP40-202ENST00000373720 IGHV6-1A0A0B4J1U7 121 aa5.1□□□□□ -1.59
SNRNP40-202ENST00000373720 LOC101927531A0A1B0GV80 90 aa5.1□□□□□ -1.59
SNRNP40-202ENST00000373720 V9GYY9 64 aa5.1□□□□□ -1.59
SNRNP40-202ENST00000373720 PLA2G1BP04054 148 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-202ENST00000373720 HRCT1Q6UXD1 115 aa5.09□□□□□ -1.59
SNRNP40-202ENST00000373720 KMT2AQ03164 3969 aa5.09□□□□□ -1.6
SNRNP40-202ENST00000373720 KRTAP1-4P0C5Y4 121 aa5.08□□□□□ -1.6
SNRNP40-202ENST00000373720 LINC00313P59037 77 aa5.08□□□□□ -1.6
SNRNP40-202ENST00000373720 C1orf195Q5TG92 126 aa5.08□□□□□ -1.6
SNRNP40-202ENST00000373720 TYMSOSQ8TAI1 123 aa5.08□□□□□ -1.6
SNRNP40-202ENST00000373720 IGLV7-46A0A075B6I9 117 aa5.07□□□□□ -1.6
SNRNP40-202ENST00000373720 A0A1B0GVY2 172 aa5.06□□□□□ -1.6
SNRNP40-202ENST00000373720 KRTAP13-2Q52LG2 175 aa5.06□□□□□ -1.6
SNRNP40-202ENST00000373720 Q8N9P0 234 aaPredicted RBP5.06□□□□□ -1.6
SNRNP40-202ENST00000373720 ANAPC11Q9NYG5 84 aa5.06□□□□□ -1.6
SNRNP40-202ENST00000373720 NDUFS5O43920 106 aa5.05□□□□□ -1.6
SNRNP40-202ENST00000373720 SRRM2Q9UQ35 2752 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-202ENST00000373720 A0A087X002 238 aa5.04□□□□□ -1.6
SNRNP40-202ENST00000373720 DNAH8Q96JB1 4490 aa5.03□□□□□ -1.6
SNRNP40-202ENST00000373720 Q1T7F1 81 aa5.02□□□□□ -1.61
SNRNP40-202ENST00000373720 LINC00304Q8N9R0 145 aa5.02□□□□□ -1.61
SNRNP40-202ENST00000373720 FRAS1Q86XX4 4008 aa5□□□□□ -1.61
SNRNP40-202ENST00000373720 OXTP01178 125 aa4.99□□□□□ -1.61
SNRNP40-202ENST00000373720 SVIPQ8NHG7 77 aa4.99□□□□□ -1.61
SNRNP40-202ENST00000373720 PKD1P98161 4303 aa4.97□□□□□ -1.61
SNRNP40-202ENST00000373720 DNAH11Q96DT5 4516 aa4.97□□□□□ -1.61
SNRNP40-202ENST00000373720 KRTAP13-3Q3SY46 172 aa4.97□□□□□ -1.61
SNRNP40-202ENST00000373720 KMT2CQ8NEZ4 4911 aaKnown RBP4.97□□□□□ -1.61
SNRNP40-202ENST00000373720 DNAH5Q8TE73 4624 aa4.96□□□□□ -1.61
SNRNP40-202ENST00000373720 FAT2Q9NYQ8 4349 aa4.96□□□□□ -1.62
SNRNP40-202ENST00000373720 FP248Q71RG6 208 aaPredicted RBP4.96□□□□□ -1.62
SNRNP40-202ENST00000373720 ACYP2P14621 99 aa4.95□□□□□ -1.62
SNRNP40-202ENST00000373720 RYR3Q15413 4870 aa4.94□□□□□ -1.62
SNRNP40-202ENST00000373720 KRTAP16-1A8MUX0 517 aa4.94□□□□□ -1.62
SNRNP40-202ENST00000373720 KRTAP10-4P60372 401 aaPredicted RBP4.93□□□□□ -1.62
SNRNP40-202ENST00000373720 NOTCH2NLQ7Z3S9 236 aa4.93□□□□□ -1.62
SNRNP40-202ENST00000373720 A8MUN3 132 aa4.92□□□□□ -1.62
SNRNP40-202ENST00000373720 IGKV2-30P06310 120 aa4.92□□□□□ -1.62
SNRNP40-202ENST00000373720 PRR26Q8N8Z3 221 aa4.92□□□□□ -1.62
SNRNP40-202ENST00000373720 C4orf26Q17RF5 130 aa4.91□□□□□ -1.62
SNRNP40-202ENST00000373720 Q5W150 140 aa4.9□□□□□ -1.63
SNRNP40-202ENST00000373720 COA5Q86WW8 74 aa4.9□□□□□ -1.63
SNRNP40-202ENST00000373720 LRP1BQ9NZR2 4599 aa4.9□□□□□ -1.63
SNRNP40-202ENST00000373720 DMAC1Q96GE9 116 aa4.89□□□□□ -1.63
SNRNP40-202ENST00000373720 PCOTHQ58A44 107 aa4.88□□□□□ -1.63
SNRNP40-202ENST00000373720 C20orf166-AS1Q96NR2 134 aa4.88□□□□□ -1.63
SNRNP40-202ENST00000373720 PRO0628Q9UI54 55 aa4.88□□□□□ -1.63
SNRNP40-202ENST00000373720 A8MUU9 505 aa4.87□□□□□ -1.63
SNRNP40-202ENST00000373720 C7orf65Q6ZTY9 151 aa4.87□□□□□ -1.63
SNRNP40-202ENST00000373720 SMR3BP02814 79 aaPredicted RBP4.86□□□□□ -1.63
SNRNP40-202ENST00000373720 HYDINQ4G0P3 5121 aa4.86□□□□□ -1.63
SNRNP40-202ENST00000373720 HRES1P13985 223 aa4.85□□□□□ -1.63
SNRNP40-202ENST00000373720 PRR4Q16378 134 aa4.85□□□□□ -1.63
SNRNP40-202ENST00000373720 MPLKIPQ8TAP9 179 aa4.85□□□□□ -1.63
SNRNP40-202ENST00000373720 LINC01558Q9Y6Z2 57 aa4.85□□□□□ -1.63
SNRNP40-202ENST00000373720 VPS13BQ7Z7G8 4022 aa4.85□□□□□ -1.63
SNRNP40-202ENST00000373720 SPTSSBQ8NFR3 76 aa4.84□□□□□ -1.63
SNRNP40-202ENST00000373720 SACSQ9NZJ4 4579 aa4.84□□□□□ -1.64
SNRNP40-202ENST00000373720 KRTAP10-8P60410 259 aa4.83□□□□□ -1.64
SNRNP40-202ENST00000373720 Q75L30 129 aa4.83□□□□□ -1.64
SNRNP40-202ENST00000373720 PRR15LQ9BU68 103 aa4.83□□□□□ -1.64
SNRNP40-202ENST00000373720 KRTAP3-1Q9BYR8 98 aa4.83□□□□□ -1.64
SNRNP40-202ENST00000373720 CHKB-CPT1BH3BT56 60 aa4.82□□□□□ -1.64
SNRNP40-202ENST00000373720 Q8N1X5 172 aa4.81□□□□□ -1.64
SNRNP40-202ENST00000373720 IGKV2D-30A0A075B6S6 120 aa4.8□□□□□ -1.64
SNRNP40-202ENST00000373720 Q5VSD8 79 aa4.79□□□□□ -1.64
SNRNP40-202ENST00000373720 BIRC6Q9NR09 4857 aa4.78□□□□□ -1.64
SNRNP40-202ENST00000373720 DYNC1H1Q14204 4646 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms