RNA–Protein interactions for RNA: ENST00000373157.8

COL6A5-203, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 2

Gene COL6A5, Length 1,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-203ENST00000373157 HTTP42858 3142 aa1.26□□□□□ -2.21
COL6A5-203ENST00000373157 ZZEF1O43149 2961 aa1.26□□□□□ -2.21
COL6A5-203ENST00000373157 C5orf42Q9H799 3197 aa1.26□□□□□ -2.21
COL6A5-203ENST00000373157 XIRP2A4UGR9 3374 aa1.26□□□□□ -2.21
COL6A5-203ENST00000373157 ZFHX4Q86UP3 3567 aa1.26□□□□□ -2.21
COL6A5-203ENST00000373157 NCOR1O75376 2440 aa1.26□□□□□ -2.21
COL6A5-203ENST00000373157 HIVEP2P31629 2446 aa1.26□□□□□ -2.21
COL6A5-203ENST00000373157 ABCA12Q86UK0 2595 aa1.26□□□□□ -2.21
COL6A5-203ENST00000373157 LAMA2P24043 3122 aaKnown RBP1.25□□□□□ -2.21
COL6A5-203ENST00000373157 MUC6Q6W4X9 2439 aa1.25□□□□□ -2.21
COL6A5-203ENST00000373157 VPS13DQ5THJ4 4388 aa1.25□□□□□ -2.21
COL6A5-203ENST00000373157 WDFY4Q6ZS81 3184 aa1.25□□□□□ -2.21
COL6A5-203ENST00000373157 FAM186AA6NE01 2351 aa1.25□□□□□ -2.21
COL6A5-203ENST00000373157 PIEZO1Q92508 2521 aa1.24□□□□□ -2.21
COL6A5-203ENST00000373157 ANKRD11Q6UB99 2663 aaPredicted RBP1.24□□□□□ -2.21
COL6A5-203ENST00000373157 M0QZ58 72 aa1.24□□□□□ -2.21
COL6A5-203ENST00000373157 DEFB133Q30KQ1 61 aa1.24□□□□□ -2.21
COL6A5-203ENST00000373157 KRTAP21-3Q3LHN1 58 aa1.24□□□□□ -2.21
COL6A5-203ENST00000373157 ITPR1Q14643 2758 aa1.24□□□□□ -2.21
COL6A5-203ENST00000373157 CRYBG3Q68DQ2 2970 aa1.24□□□□□ -2.21
COL6A5-203ENST00000373157 BOD1L1Q8NFC6 3051 aa1.24□□□□□ -2.21
COL6A5-203ENST00000373157 BDP1A6H8Y1 2624 aa1.24□□□□□ -2.21
COL6A5-203ENST00000373157 CACNA1HO95180 2353 aa1.23□□□□□ -2.21
COL6A5-203ENST00000373157 ZNF292O60281 2723 aa1.23□□□□□ -2.21
COL6A5-203ENST00000373157 RELNP78509 3460 aa1.23□□□□□ -2.21
COL6A5-203ENST00000373157 MUC3AQ02505 3323 aa1.23□□□□□ -2.21
COL6A5-203ENST00000373157 TRIOO75962 3097 aa1.23□□□□□ -2.21
COL6A5-203ENST00000373157 AKAP9Q99996 3911 aa1.23□□□□□ -2.21
COL6A5-203ENST00000373157 USP9XQ93008 2570 aaPredicted RBP1.22□□□□□ -2.21
COL6A5-203ENST00000373157 F8P00451 2351 aa1.22□□□□□ -2.21
COL6A5-203ENST00000373157 MEGF8Q7Z7M0 2845 aa1.22□□□□□ -2.21
COL6A5-203ENST00000373157 FLNBO75369 2602 aaKnown RBP1.22□□□□□ -2.21
COL6A5-203ENST00000373157 KRTAP12-3P60328 96 aa1.22□□□□□ -2.21
COL6A5-203ENST00000373157 NAV2Q8IVL1 2488 aa1.22□□□□□ -2.21
COL6A5-203ENST00000373157 PRRC2CQ9Y520 2896 aaKnown RBP1.22□□□□□ -2.21
COL6A5-203ENST00000373157 LAMA5O15230 3695 aa1.22□□□□□ -2.21
COL6A5-203ENST00000373157 FASNP49327 2511 aaKnown RBP1.22□□□□□ -2.21
COL6A5-203ENST00000373157 SRRM2Q9UQ35 2752 aaKnown RBP1.21□□□□□ -2.22
COL6A5-203ENST00000373157 VWFP04275 2813 aa1.21□□□□□ -2.22
COL6A5-203ENST00000373157 TEP1Q99973 2627 aaKnown RBP1.21□□□□□ -2.22
COL6A5-203ENST00000373157 H3BUX3 64 aa1.21□□□□□ -2.22
COL6A5-203ENST00000373157 KALRNO60229 2985 aa1.21□□□□□ -2.22
COL6A5-203ENST00000373157 EPG5Q9HCE0 2579 aa1.21□□□□□ -2.22
COL6A5-203ENST00000373157 DNAH14Q0VDD8 3507 aa1.2□□□□□ -2.22
COL6A5-203ENST00000373157 DCHS1Q96JQ0 3298 aa1.2□□□□□ -2.22
COL6A5-203ENST00000373157 DNAH11Q96DT5 4516 aa1.2□□□□□ -2.22
COL6A5-203ENST00000373157 CREBBPQ92793 2442 aa1.2□□□□□ -2.22
COL6A5-203ENST00000373157 CELSR3Q9NYQ7 3312 aa1.2□□□□□ -2.22
COL6A5-203ENST00000373157 A0A096LPF7 62 aa1.2□□□□□ -2.22
COL6A5-203ENST00000373157 DEFB135Q30KP9 77 aa1.2□□□□□ -2.22
COL6A5-203ENST00000373157 MAP1BP46821 2468 aaKnown RBP1.2□□□□□ -2.22
COL6A5-203ENST00000373157 CCDC168Q8NDH2 2452 aa1.2□□□□□ -2.22
COL6A5-203ENST00000373157 TTC28Q96AY4 2481 aa1.2□□□□□ -2.22
COL6A5-203ENST00000373157 CHD9Q3L8U1 2897 aa1.2□□□□□ -2.22
COL6A5-203ENST00000373157 COL12A1Q99715 3063 aa1.2□□□□□ -2.22
COL6A5-203ENST00000373157 AHNAK2Q8IVF2 5795 aa1.2□□□□□ -2.22
COL6A5-203ENST00000373157 PTPN13Q12923 2485 aa1.19□□□□□ -2.22
COL6A5-203ENST00000373157 RIF1Q5UIP0 2472 aaKnown RBP1.19□□□□□ -2.22
COL6A5-203ENST00000373157 SPENQ96T58 3664 aaKnown RBP1.19□□□□□ -2.22
COL6A5-203ENST00000373157 FRYQ5TBA9 3013 aa1.19□□□□□ -2.22
COL6A5-203ENST00000373157 CEP290O15078 2479 aa1.19□□□□□ -2.22
COL6A5-203ENST00000373157 NBASA2RRP1 2371 aa1.19□□□□□ -2.22
COL6A5-203ENST00000373157 DMXL1Q9Y485 3027 aa1.19□□□□□ -2.22
COL6A5-203ENST00000373157 MAP1AP78559 2803 aaPredicted RBP1.19□□□□□ -2.22
COL6A5-203ENST00000373157 AKAP13Q12802 2813 aa1.19□□□□□ -2.22
COL6A5-203ENST00000373157 CSMD1Q96PZ7 3565 aa1.19□□□□□ -2.22
COL6A5-203ENST00000373157 A0A096LNI7 61 aa1.19□□□□□ -2.22
COL6A5-203ENST00000373157 U3KQA8 63 aa1.19□□□□□ -2.22
COL6A5-203ENST00000373157 SPG11Q96JI7 2443 aa1.18□□□□□ -2.22
COL6A5-203ENST00000373157 DMBT1Q9UGM3 2413 aaPredicted RBP1.18□□□□□ -2.22
COL6A5-203ENST00000373157 MYO18BQ8IUG5 2567 aa1.18□□□□□ -2.22
COL6A5-203ENST00000373157 EP300Q09472 2414 aaPredicted RBP1.18□□□□□ -2.22
COL6A5-203ENST00000373157 FBN3Q75N90 2809 aa1.18□□□□□ -2.22
COL6A5-203ENST00000373157 LRBAP50851 2863 aa1.18□□□□□ -2.22
COL6A5-203ENST00000373157 GCN1Q92616 2671 aaKnown RBP1.17□□□□□ -2.22
COL6A5-203ENST00000373157 ASPMQ8IZT6 3477 aa1.17□□□□□ -2.22
COL6A5-203ENST00000373157 CELSR1Q9NYQ6 3014 aa1.17□□□□□ -2.22
COL6A5-203ENST00000373157 BRCA2P51587 3418 aa1.17□□□□□ -2.22
COL6A5-203ENST00000373157 ATMQ13315 3056 aa1.17□□□□□ -2.22
COL6A5-203ENST00000373157 DNAH12Q6ZR08 3092 aa1.17□□□□□ -2.22
COL6A5-203ENST00000373157 NF1P21359 2839 aa1.17□□□□□ -2.22
COL6A5-203ENST00000373157 WDFY3Q8IZQ1 3526 aa1.17□□□□□ -2.22
COL6A5-203ENST00000373157 COL6A5A8TX70 2615 aa1.17□□□□□ -2.22
COL6A5-203ENST00000373157 LAMA1P25391 3075 aa1.17□□□□□ -2.22
COL6A5-203ENST00000373157 MYCBP2O75592 4640 aa1.17□□□□□ -2.22
COL6A5-203ENST00000373157 UBR4Q5T4S7 5183 aa1.17□□□□□ -2.22
COL6A5-203ENST00000373157 HIVEP3Q5T1R4 2406 aa1.16□□□□□ -2.22
COL6A5-203ENST00000373157 POLQO75417 2590 aa1.16□□□□□ -2.22
COL6A5-203ENST00000373157 NCOR2Q9Y618 2525 aa1.16□□□□□ -2.22
COL6A5-203ENST00000373157 HECTD1Q9ULT8 2610 aa1.16□□□□□ -2.22
COL6A5-203ENST00000373157 ITPR3Q14573 2671 aa1.16□□□□□ -2.22
COL6A5-203ENST00000373157 SETD2Q9BYW2 2564 aaPredicted RBP1.16□□□□□ -2.22
COL6A5-203ENST00000373157 LAMA3Q16787 3333 aa1.15□□□□□ -2.22
COL6A5-203ENST00000373157 FREM2Q5SZK8 3169 aa1.15□□□□□ -2.23
COL6A5-203ENST00000373157 DOPEY1Q5JWR5 2465 aa1.15□□□□□ -2.23
COL6A5-203ENST00000373157 SMG1Q96Q15 3661 aaKnown RBP1.14□□□□□ -2.23
COL6A5-203ENST00000373157 SPART-AS1P0CW21 52 aa1.14□□□□□ -2.23
COL6A5-203ENST00000373157 SPINK6Q6UWN8 80 aa1.14□□□□□ -2.23
COL6A5-203ENST00000373157 DNAH8Q96JB1 4490 aa1.14□□□□□ -2.23
COL6A5-203ENST00000373157 LOC400499M0QZD8 3231 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms