RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 SPINK6Q6UWN8 80 aa5.77□□□□□ -1.49
LRRC40-201ENST00000370952 MDFIQ99750 246 aa5.77□□□□□ -1.49
LRRC40-201ENST00000370952 MGAM2Q2M2H8 2515 aa5.76□□□□□ -1.49
LRRC40-201ENST00000370952 FRAS1Q86XX4 4008 aa5.75□□□□□ -1.49
LRRC40-201ENST00000370952 KRTAP24-1Q3LI83 254 aa5.74□□□□□ -1.49
LRRC40-201ENST00000370952 C14orf177Q52M58 125 aa5.74□□□□□ -1.49
LRRC40-201ENST00000370952 PLECQ15149 4684 aaKnown RBP5.74□□□□□ -1.49
LRRC40-201ENST00000370952 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.73□□□□□ -1.49
LRRC40-201ENST00000370952 C8orf87E5RJ46 101 aa5.73□□□□□ -1.49
LRRC40-201ENST00000370952 WWC2-AS2Q96NR7 200 aa5.73□□□□□ -1.49
LRRC40-201ENST00000370952 RETNLBQ9BQ08 111 aa5.71□□□□□ -1.5
LRRC40-201ENST00000370952 ACYP2P14621 99 aa5.7□□□□□ -1.5
LRRC40-201ENST00000370952 KRTAP13-3Q3SY46 172 aa5.7□□□□□ -1.5
LRRC40-201ENST00000370952 LINC00483Q53H64 154 aa5.7□□□□□ -1.5
LRRC40-201ENST00000370952 A0A1B0GU69 56 aa5.67□□□□□ -1.5
LRRC40-201ENST00000370952 PSORS1C2Q9UIG4 136 aa5.67□□□□□ -1.5
LRRC40-201ENST00000370952 SPACA4Q8TDM5 124 aa5.67□□□□□ -1.5
LRRC40-201ENST00000370952 APLNQ9ULZ1 77 aa5.67□□□□□ -1.5
LRRC40-201ENST00000370952 DNAH17Q9UFH2 4485 aa5.66□□□□□ -1.5
LRRC40-201ENST00000370952 ZNF706Q9Y5V0 76 aaPredicted RBP5.65□□□□□ -1.5
LRRC40-201ENST00000370952 CIRBP-AS1Q8TBR5 109 aa5.65□□□□□ -1.51
LRRC40-201ENST00000370952 DMAC1Q96GE9 116 aa5.65□□□□□ -1.51
LRRC40-201ENST00000370952 HECTD4Q9Y4D8 3996 aa5.64□□□□□ -1.51
LRRC40-201ENST00000370952 PLA2G1BP04054 148 aaKnown RBP5.64□□□□□ -1.51
LRRC40-201ENST00000370952 NBDYA0A0U1RRE5 68 aa5.63□□□□□ -1.51
LRRC40-201ENST00000370952 DYNC2H1Q8NCM8 4307 aaKnown RBP5.63□□□□□ -1.51
LRRC40-201ENST00000370952 LINC01554Q52M75 96 aa5.62□□□□□ -1.51
LRRC40-201ENST00000370952 Q6ZRN7 208 aaPredicted RBP5.62□□□□□ -1.51
LRRC40-201ENST00000370952 IGLV5-52A0A0A0MRZ9 124 aa5.62□□□□□ -1.51
LRRC40-201ENST00000370952 ZNF861PO60384 105 aa5.61□□□□□ -1.51
LRRC40-201ENST00000370952 SPATA8Q6RVD6 105 aa5.61□□□□□ -1.51
LRRC40-201ENST00000370952 RTL8CO15255 209 aa5.61□□□□□ -1.51
LRRC40-201ENST00000370952 MIR22HGQ0VDD5 57 aa5.61□□□□□ -1.51
LRRC40-201ENST00000370952 C4orf48Q5BLP8 95 aa5.6□□□□□ -1.51
LRRC40-201ENST00000370952 MEGF8Q7Z7M0 2845 aa5.6□□□□□ -1.51
LRRC40-201ENST00000370952 TGP01266 2768 aa5.59□□□□□ -1.51
LRRC40-201ENST00000370952 DNAH2Q9P225 4427 aa5.58□□□□□ -1.52
LRRC40-201ENST00000370952 UQCR11O14957 56 aa5.58□□□□□ -1.52
LRRC40-201ENST00000370952 VPS13DQ5THJ4 4388 aa5.58□□□□□ -1.52
LRRC40-201ENST00000370952 IGKV2-30P06310 120 aa5.57□□□□□ -1.52
LRRC40-201ENST00000370952 FAM229AH3BQW9 127 aa5.56□□□□□ -1.52
LRRC40-201ENST00000370952 CSAG1Q6PB30 78 aa5.56□□□□□ -1.52
LRRC40-201ENST00000370952 STARD9Q9P2P6 4700 aa5.56□□□□□ -1.52
LRRC40-201ENST00000370952 A0A087WTM6 91 aa5.56□□□□□ -1.52
LRRC40-201ENST00000370952 FBN3Q75N90 2809 aa5.55□□□□□ -1.52
LRRC40-201ENST00000370952 IGKV2D-30A0A075B6S6 120 aa5.55□□□□□ -1.52
LRRC40-201ENST00000370952 KMT2AQ03164 3969 aa5.53□□□□□ -1.52
LRRC40-201ENST00000370952 SPINK1P00995 79 aa5.52□□□□□ -1.53
LRRC40-201ENST00000370952 IGLV7-43P04211 117 aa5.52□□□□□ -1.53
LRRC40-201ENST00000370952 H3BS24 57 aa5.51□□□□□ -1.53
LRRC40-201ENST00000370952 DNAH11Q96DT5 4516 aa5.5□□□□□ -1.53
LRRC40-201ENST00000370952 DNAH6Q9C0G6 4158 aa5.48□□□□□ -1.53
LRRC40-201ENST00000370952 SSBP3-AS1Q7Z2R9 100 aa5.48□□□□□ -1.53
LRRC40-201ENST00000370952 KRTAP16-1A8MUX0 517 aa5.47□□□□□ -1.53
LRRC40-201ENST00000370952 Q8N1X5 172 aa5.45□□□□□ -1.54
LRRC40-201ENST00000370952 DNAH5Q8TE73 4624 aa5.45□□□□□ -1.54
LRRC40-201ENST00000370952 NUPR2A6NF83 97 aa5.44□□□□□ -1.54
LRRC40-201ENST00000370952 KRTAP13-2Q52LG2 175 aa5.44□□□□□ -1.54
LRRC40-201ENST00000370952 FLG2Q5D862 2391 aaPredicted RBP5.43□□□□□ -1.54
LRRC40-201ENST00000370952 LRP1BQ9NZR2 4599 aa5.43□□□□□ -1.54
LRRC40-201ENST00000370952 PRKDCP78527 4128 aaKnown RBP5.42□□□□□ -1.54
LRRC40-201ENST00000370952 H0YAA0 97 aa5.38□□□□□ -1.55
LRRC40-201ENST00000370952 Q6ZSA8 131 aa5.38□□□□□ -1.55
LRRC40-201ENST00000370952 C1orf134Q5TEV5 83 aa5.37□□□□□ -1.55
LRRC40-201ENST00000370952 TYMSOSQ8TAI1 123 aa5.36□□□□□ -1.55
LRRC40-201ENST00000370952 A8MUU9 505 aa5.35□□□□□ -1.55
LRRC40-201ENST00000370952 DNHD1Q96M86 4753 aa5.35□□□□□ -1.55
LRRC40-201ENST00000370952 LY6G6CO95867 125 aa5.35□□□□□ -1.55
LRRC40-201ENST00000370952 LINC00304Q8N9R0 145 aa5.34□□□□□ -1.55
LRRC40-201ENST00000370952 KRTAP10-2P60368 255 aa5.33□□□□□ -1.56
LRRC40-201ENST00000370952 KRTAP25-1Q3LHN0 102 aa5.33□□□□□ -1.56
LRRC40-201ENST00000370952 CRIPTQ9P021 101 aa5.33□□□□□ -1.56
LRRC40-201ENST00000370952 VPS13BQ7Z7G8 4022 aa5.31□□□□□ -1.56
LRRC40-201ENST00000370952 KRTAP1-4P0C5Y4 121 aa5.3□□□□□ -1.56
LRRC40-201ENST00000370952 A0A1B0GU33 70 aa5.29□□□□□ -1.56
LRRC40-201ENST00000370952 FAT2Q9NYQ8 4349 aa5.27□□□□□ -1.57
LRRC40-201ENST00000370952 ROMO1P60602 79 aa5.27□□□□□ -1.57
LRRC40-201ENST00000370952 H1FX-AS1Q4G0G2 97 aa5.26□□□□□ -1.57
LRRC40-201ENST00000370952 PKD1P98161 4303 aa5.25□□□□□ -1.57
LRRC40-201ENST00000370952 KRTAP10-1P60331 282 aa5.25□□□□□ -1.57
LRRC40-201ENST00000370952 KRTAP3-1Q9BYR8 98 aa5.24□□□□□ -1.57
LRRC40-201ENST00000370952 C9orf92A6NGG3 77 aa5.23□□□□□ -1.57
LRRC40-201ENST00000370952 HYDINQ4G0P3 5121 aa5.21□□□□□ -1.57
LRRC40-201ENST00000370952 DMBT1Q9UGM3 2413 aaPredicted RBP5.21□□□□□ -1.58
LRRC40-201ENST00000370952 COX6B2Q6YFQ2 88 aa5.17□□□□□ -1.58
LRRC40-201ENST00000370952 K7ERS5 55 aa5.16□□□□□ -1.58
LRRC40-201ENST00000370952 P0C880 135 aa5.16□□□□□ -1.58
LRRC40-201ENST00000370952 SACSQ9NZJ4 4579 aa5.13□□□□□ -1.59
LRRC40-201ENST00000370952 C20orf166-AS1Q96NR2 134 aa5.11□□□□□ -1.59
LRRC40-201ENST00000370952 FAT1Q14517 4588 aa5.11□□□□□ -1.59
LRRC40-201ENST00000370952 PKHD1P08F94 4074 aa5.1□□□□□ -1.59
LRRC40-201ENST00000370952 A0A0D9SG42 100 aa5.1□□□□□ -1.59
LRRC40-201ENST00000370952 TPRXLQ17RH7 258 aa5.06□□□□□ -1.6
LRRC40-201ENST00000370952 KRTAP13-4Q3LI77 160 aa5.06□□□□□ -1.6
LRRC40-201ENST00000370952 SPINT4Q6UDR6 99 aa5.06□□□□□ -1.6
LRRC40-201ENST00000370952 DYNC1H1Q14204 4646 aaKnown RBP5.06□□□□□ -1.6
LRRC40-201ENST00000370952 SMR3BP02814 79 aaPredicted RBP5.06□□□□□ -1.6
LRRC40-201ENST00000370952 C10orf95Q9H7T3 257 aa5.06□□□□□ -1.6
LRRC40-201ENST00000370952 RPL37P61927 97 aaKnown RBP5.05□□□□□ -1.6
LRRC40-201ENST00000370952 RPS29P62273 56 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms