RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 CDC42SE1Q9NRR8 79 aa7.79□□□□□ -1.16
GPC3-201ENST00000370818 HYDINQ4G0P3 5121 aa7.79□□□□□ -1.16
GPC3-201ENST00000370818 H3BPC8 53 aa7.79□□□□□ -1.16
GPC3-201ENST00000370818 PSORS1C2Q9UIG4 136 aa7.79□□□□□ -1.16
GPC3-201ENST00000370818 C7orf65Q6ZTY9 151 aa7.77□□□□□ -1.17
GPC3-201ENST00000370818 FAT2Q9NYQ8 4349 aa7.77□□□□□ -1.17
GPC3-201ENST00000370818 COA5Q86WW8 74 aa7.76□□□□□ -1.17
GPC3-201ENST00000370818 KRTAP10-2P60368 255 aa7.76□□□□□ -1.17
GPC3-201ENST00000370818 RPL37AP61513 92 aaKnown RBP7.75□□□□□ -1.17
GPC3-201ENST00000370818 MOBPQ13875 183 aa7.75□□□□□ -1.17
GPC3-201ENST00000370818 A0A087WSZ3 146 aa7.75□□□□□ -1.17
GPC3-201ENST00000370818 IGLV7-46A0A075B6I9 117 aa7.72□□□□□ -1.17
GPC3-201ENST00000370818 LINC00483Q53H64 154 aa7.72□□□□□ -1.17
GPC3-201ENST00000370818 CASC2Q6XLA1 102 aa7.72□□□□□ -1.17
GPC3-201ENST00000370818 PKD1P98161 4303 aa7.71□□□□□ -1.17
GPC3-201ENST00000370818 ZNF861PO60384 105 aa7.71□□□□□ -1.17
GPC3-201ENST00000370818 LINC01558Q9Y6Z2 57 aa7.71□□□□□ -1.18
GPC3-201ENST00000370818 C4orf48Q5BLP8 95 aa7.69□□□□□ -1.18
GPC3-201ENST00000370818 IGLV9-49A0A0B4J1Y8 123 aa7.68□□□□□ -1.18
GPC3-201ENST00000370818 CIRBP-AS1Q8TBR5 109 aa7.68□□□□□ -1.18
GPC3-201ENST00000370818 SPAG11AQ6PDA7 123 aa7.68□□□□□ -1.18
GPC3-201ENST00000370818 C8orf87E5RJ46 101 aa7.67□□□□□ -1.18
GPC3-201ENST00000370818 ZNF706Q9Y5V0 76 aaPredicted RBP7.67□□□□□ -1.18
GPC3-201ENST00000370818 ANAPC11Q9NYG5 84 aa7.67□□□□□ -1.18
GPC3-201ENST00000370818 SPINK7P58062 85 aa7.66□□□□□ -1.18
GPC3-201ENST00000370818 IGLV7-43P04211 117 aa7.66□□□□□ -1.18
GPC3-201ENST00000370818 KRTAP10-1P60331 282 aa7.66□□□□□ -1.18
GPC3-201ENST00000370818 SACSQ9NZJ4 4579 aa7.66□□□□□ -1.18
GPC3-201ENST00000370818 LRP1BQ9NZR2 4599 aa7.66□□□□□ -1.18
GPC3-201ENST00000370818 Q6ZSA8 131 aa7.65□□□□□ -1.18
GPC3-201ENST00000370818 LINC00472Q9H8W2 130 aa7.65□□□□□ -1.18
GPC3-201ENST00000370818 A8MWP4 228 aa7.63□□□□□ -1.19
GPC3-201ENST00000370818 PCOTHQ58A44 107 aa7.62□□□□□ -1.19
GPC3-201ENST00000370818 LINC00313P59037 77 aa7.59□□□□□ -1.2
GPC3-201ENST00000370818 Q96NJ1 140 aa7.58□□□□□ -1.2
GPC3-201ENST00000370818 MMP24-AS1A0A0U1RRL7 71 aa7.58□□□□□ -1.2
GPC3-201ENST00000370818 HRES1P13985 223 aa7.57□□□□□ -1.2
GPC3-201ENST00000370818 PRAC1Q96KF2 57 aa7.57□□□□□ -1.2
GPC3-201ENST00000370818 PKHD1P08F94 4074 aa7.55□□□□□ -1.2
GPC3-201ENST00000370818 VPS13BQ7Z7G8 4022 aa7.53□□□□□ -1.2
GPC3-201ENST00000370818 ADM2Q7Z4H4 148 aa7.52□□□□□ -1.21
GPC3-201ENST00000370818 ASB16-AS1Q495Z4 193 aa7.51□□□□□ -1.21
GPC3-201ENST00000370818 TP53AIP1Q9HCN2 124 aa7.51□□□□□ -1.21
GPC3-201ENST00000370818 PLA2G1BP04054 148 aaKnown RBP7.5□□□□□ -1.21
GPC3-201ENST00000370818 A0A087X002 238 aa7.49□□□□□ -1.21
GPC3-201ENST00000370818 LINC01554Q52M75 96 aa7.48□□□□□ -1.21
GPC3-201ENST00000370818 SSBP3-AS1Q7Z2R9 100 aa7.48□□□□□ -1.21
GPC3-201ENST00000370818 PRR26Q8N8Z3 221 aa7.47□□□□□ -1.21
GPC3-201ENST00000370818 H3BS24 57 aa7.47□□□□□ -1.21
GPC3-201ENST00000370818 KRTAP13-2Q52LG2 175 aa7.47□□□□□ -1.21
GPC3-201ENST00000370818 DYNC1H1Q14204 4646 aaKnown RBP7.45□□□□□ -1.22
GPC3-201ENST00000370818 KRTAP1-4P0C5Y4 121 aa7.45□□□□□ -1.22
GPC3-201ENST00000370818 A0A1B0GVX0 72 aa7.43□□□□□ -1.22
GPC3-201ENST00000370818 A0A1B0GVY2 172 aa7.43□□□□□ -1.22
GPC3-201ENST00000370818 C8orf17Q9NRJ1 99 aa7.43□□□□□ -1.22
GPC3-201ENST00000370818 IGHV6-1A0A0B4J1U7 121 aa7.42□□□□□ -1.22
GPC3-201ENST00000370818 RYR2Q92736 4967 aa7.41□□□□□ -1.22
GPC3-201ENST00000370818 NOTCH2NLQ7Z3S9 236 aa7.4□□□□□ -1.22
GPC3-201ENST00000370818 KMT2CQ8NEZ4 4911 aaKnown RBP7.4□□□□□ -1.23
GPC3-201ENST00000370818 CDK2AP2O75956 126 aa7.4□□□□□ -1.23
GPC3-201ENST00000370818 SPINK6Q6UWN8 80 aa7.4□□□□□ -1.23
GPC3-201ENST00000370818 APOBP04114 4563 aaKnown RBP7.38□□□□□ -1.23
GPC3-201ENST00000370818 FAT1Q14517 4588 aa7.36□□□□□ -1.23
GPC3-201ENST00000370818 SPATA8Q6RVD6 105 aa7.36□□□□□ -1.23
GPC3-201ENST00000370818 MRPL34Q9BQ48 92 aaKnown RBP7.35□□□□□ -1.23
GPC3-201ENST00000370818 SMR3BP02814 79 aaPredicted RBP7.34□□□□□ -1.23
GPC3-201ENST00000370818 ACYP2P14621 99 aa7.32□□□□□ -1.24
GPC3-201ENST00000370818 Q5W150 140 aa7.3□□□□□ -1.24
GPC3-201ENST00000370818 TYMSOSQ8TAI1 123 aa7.3□□□□□ -1.24
GPC3-201ENST00000370818 KRTAP10-4P60372 401 aaPredicted RBP7.29□□□□□ -1.24
GPC3-201ENST00000370818 A0A1B0GU69 56 aa7.29□□□□□ -1.24
GPC3-201ENST00000370818 KRTAP13-3Q3SY46 172 aa7.28□□□□□ -1.24
GPC3-201ENST00000370818 CSAG1Q6PB30 78 aa7.27□□□□□ -1.25
GPC3-201ENST00000370818 MIR22HGQ0VDD5 57 aa7.26□□□□□ -1.25
GPC3-201ENST00000370818 SPINK1P00995 79 aa7.25□□□□□ -1.25
GPC3-201ENST00000370818 DMAC1Q96GE9 116 aa7.24□□□□□ -1.25
GPC3-201ENST00000370818 RETNLBQ9BQ08 111 aa7.23□□□□□ -1.25
GPC3-201ENST00000370818 UQCR11O14957 56 aa7.23□□□□□ -1.25
GPC3-201ENST00000370818 PKHD1L1Q86WI1 4243 aa7.22□□□□□ -1.25
GPC3-201ENST00000370818 LINC00304Q8N9R0 145 aa7.21□□□□□ -1.26
GPC3-201ENST00000370818 KRTAP16-1A8MUX0 517 aa7.19□□□□□ -1.26
GPC3-201ENST00000370818 RYR3Q15413 4870 aa7.19□□□□□ -1.26
GPC3-201ENST00000370818 RPS29P62273 56 aaKnown RBP7.17□□□□□ -1.26
GPC3-201ENST00000370818 HSPG2P98160 4391 aa7.15□□□□□ -1.26
GPC3-201ENST00000370818 FAM229AH3BQW9 127 aa7.12□□□□□ -1.27
GPC3-201ENST00000370818 LRP1Q07954 4544 aaKnown RBP7.06□□□□□ -1.28
GPC3-201ENST00000370818 IGKV2-30P06310 120 aa7.06□□□□□ -1.28
GPC3-201ENST00000370818 TNXBP22105 4242 aa7.05□□□□□ -1.28
GPC3-201ENST00000370818 Q5VSD8 79 aa7.04□□□□□ -1.28
GPC3-201ENST00000370818 RYR1P21817 5038 aa7.04□□□□□ -1.28
GPC3-201ENST00000370818 KRTAP17-1Q9BYP8 105 aa7.03□□□□□ -1.28
GPC3-201ENST00000370818 ROMO1P60602 79 aa7.02□□□□□ -1.29
GPC3-201ENST00000370818 KRTAP25-1Q3LHN0 102 aa7.01□□□□□ -1.29
GPC3-201ENST00000370818 Q8N1X5 172 aa7□□□□□ -1.29
GPC3-201ENST00000370818 FLG2Q5D862 2391 aaPredicted RBP6.99□□□□□ -1.29
GPC3-201ENST00000370818 C9orf92A6NGG3 77 aa6.99□□□□□ -1.29
GPC3-201ENST00000370818 KRTAP10-8P60410 259 aa6.99□□□□□ -1.29
GPC3-201ENST00000370818 KIAA1109Q2LD37 5005 aa6.98□□□□□ -1.29
GPC3-201ENST00000370818 FAT3Q8TDW7 4589 aa6.97□□□□□ -1.29
GPC3-201ENST00000370818 IGKV2D-30A0A075B6S6 120 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms