RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 Q9BRP9 147 aa2.15□□□□□ -2.06
MCF2-202ENST00000370573 VPS13BQ7Z7G8 4022 aa2.15□□□□□ -2.06
MCF2-202ENST00000370573 RYR1P21817 5038 aa2.15□□□□□ -2.07
MCF2-202ENST00000370573 HSPG2P98160 4391 aa2.15□□□□□ -2.07
MCF2-202ENST00000370573 ETDCA0A1B0GVM5 59 aa2.15□□□□□ -2.07
MCF2-202ENST00000370573 SMR3BP02814 79 aaPredicted RBP2.15□□□□□ -2.07
MCF2-202ENST00000370573 PRLHP81277 87 aa2.15□□□□□ -2.07
MCF2-202ENST00000370573 Q6ZRX8 168 aa2.15□□□□□ -2.07
MCF2-202ENST00000370573 KRTAP13-1Q8IUC0 172 aa2.15□□□□□ -2.07
MCF2-202ENST00000370573 TYMSOSQ8TAI1 123 aa2.15□□□□□ -2.07
MCF2-202ENST00000370573 SMCR5Q8TEV8 140 aa2.15□□□□□ -2.07
MCF2-202ENST00000370573 TRAV7A0A075B6U4 112 aa2.14□□□□□ -2.07
MCF2-202ENST00000370573 KRTAP5-9P26371 169 aa2.14□□□□□ -2.07
MCF2-202ENST00000370573 C1orf137Q5JT78 98 aa2.14□□□□□ -2.07
MCF2-202ENST00000370573 KIAA1109Q2LD37 5005 aa2.14□□□□□ -2.07
MCF2-202ENST00000370573 DNAL4O96015 105 aa2.14□□□□□ -2.07
MCF2-202ENST00000370573 IGLV7-43P04211 117 aa2.13□□□□□ -2.07
MCF2-202ENST00000370573 KRTAP10-4P60372 401 aaPredicted RBP2.13□□□□□ -2.07
MCF2-202ENST00000370573 ST20-AS1Q8NBB2 130 aa2.13□□□□□ -2.07
MCF2-202ENST00000370573 BRK1Q8WUW1 75 aa2.13□□□□□ -2.07
MCF2-202ENST00000370573 H7BZZ5 65 aa2.13□□□□□ -2.07
MCF2-202ENST00000370573 ZNF861PO60384 105 aa2.13□□□□□ -2.07
MCF2-202ENST00000370573 UBE2AP49459 152 aa2.13□□□□□ -2.07
MCF2-202ENST00000370573 Q6ZQY7 126 aa2.13□□□□□ -2.07
MCF2-202ENST00000370573 OBSCN-AS1Q96MR7 158 aa2.13□□□□□ -2.07
MCF2-202ENST00000370573 HIGD2AQ9BW72 106 aa2.13□□□□□ -2.07
MCF2-202ENST00000370573 CCKP06307 115 aa2.12□□□□□ -2.07
MCF2-202ENST00000370573 BAALC-AS2P0C853 105 aa2.12□□□□□ -2.07
MCF2-202ENST00000370573 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.12□□□□□ -2.07
MCF2-202ENST00000370573 FP248Q71RG6 208 aaPredicted RBP2.12□□□□□ -2.07
MCF2-202ENST00000370573 PKHD1L1Q86WI1 4243 aa2.12□□□□□ -2.07
MCF2-202ENST00000370573 NDUFS5O43920 106 aa2.12□□□□□ -2.07
MCF2-202ENST00000370573 RPL37AP61513 92 aaKnown RBP2.12□□□□□ -2.07
MCF2-202ENST00000370573 DEFB105AQ8NG35 78 aa2.12□□□□□ -2.07
MCF2-202ENST00000370573 IGLV5-48A0A075B6I7 105 aa2.11□□□□□ -2.07
MCF2-202ENST00000370573 LCE1FQ5T754 118 aa2.11□□□□□ -2.07
MCF2-202ENST00000370573 ORMDL1Q9P0S3 153 aa2.11□□□□□ -2.07
MCF2-202ENST00000370573 BIRC6Q9NR09 4857 aa2.11□□□□□ -2.07
MCF2-202ENST00000370573 JMJD7-PLA2G4BH0Y9G9 81 aa2.11□□□□□ -2.07
MCF2-202ENST00000370573 H3BQ85 93 aa2.11□□□□□ -2.07
MCF2-202ENST00000370573 CYSTM1Q9H1C7 97 aa2.11□□□□□ -2.07
MCF2-202ENST00000370573 ANAPC11Q9NYG5 84 aa2.11□□□□□ -2.07
MCF2-202ENST00000370573 RBM12B-AS1Q9P1G2 102 aa2.11□□□□□ -2.07
MCF2-202ENST00000370573 PSPHP1O15172 72 aa2.1□□□□□ -2.07
MCF2-202ENST00000370573 SPRR1BP22528 89 aa2.1□□□□□ -2.07
MCF2-202ENST00000370573 RBM3P98179 157 aaKnown RBP2.1□□□□□ -2.07
MCF2-202ENST00000370573 SPRR4Q96PI1 79 aa2.1□□□□□ -2.07
MCF2-202ENST00000370573 C8orf87E5RJ46 101 aa2.1□□□□□ -2.07
MCF2-202ENST00000370573 KRTAP10-5P60370 271 aa2.1□□□□□ -2.07
MCF2-202ENST00000370573 Q1T7F1 81 aa2.1□□□□□ -2.07
MCF2-202ENST00000370573 C20orf197Q8N268 126 aa2.1□□□□□ -2.07
MCF2-202ENST00000370573 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
MCF2-202ENST00000370573 IGHV6-1A0A0B4J1U7 121 aa2.09□□□□□ -2.07
MCF2-202ENST00000370573 TMEM256-PLSCR3K7ERE1 68 aa2.09□□□□□ -2.07
MCF2-202ENST00000370573 LINC00483Q53H64 154 aa2.09□□□□□ -2.07
MCF2-202ENST00000370573 KTN1-AS1Q86SY8 53 aa2.09□□□□□ -2.07
MCF2-202ENST00000370573 KRTAP1-4P0C5Y4 121 aa2.09□□□□□ -2.07
MCF2-202ENST00000370573 PDE6GP18545 87 aa2.09□□□□□ -2.07
MCF2-202ENST00000370573 Q5VSD8 79 aa2.09□□□□□ -2.07
MCF2-202ENST00000370573 KRTAP5-4Q6L8H1 288 aa2.09□□□□□ -2.07
MCF2-202ENST00000370573 SPINK6Q6UWN8 80 aa2.09□□□□□ -2.07
MCF2-202ENST00000370573 UBL5Q9BZL1 73 aa2.09□□□□□ -2.07
MCF2-202ENST00000370573 A0A0G2JQZ4 141 aa2.08□□□□□ -2.08
MCF2-202ENST00000370573 KRTAP10-12P60413 245 aa2.08□□□□□ -2.08
MCF2-202ENST00000370573 ZNF706Q9Y5V0 76 aaPredicted RBP2.08□□□□□ -2.08
MCF2-202ENST00000370573 HERC2O95714 4834 aa2.08□□□□□ -2.08
MCF2-202ENST00000370573 KRTAP13-2Q52LG2 175 aa2.07□□□□□ -2.08
MCF2-202ENST00000370573 C14orf132Q9NPU4 83 aa2.07□□□□□ -2.08
MCF2-202ENST00000370573 LINC00846Q9NV44 126 aa2.07□□□□□ -2.08
MCF2-202ENST00000370573 LRP1Q07954 4544 aaKnown RBP2.07□□□□□ -2.08
MCF2-202ENST00000370573 FAT3Q8TDW7 4589 aa2.07□□□□□ -2.08
MCF2-202ENST00000370573 F8WEM9 126 aa2.07□□□□□ -2.08
MCF2-202ENST00000370573 FLG2Q5D862 2391 aaPredicted RBP2.07□□□□□ -2.08
MCF2-202ENST00000370573 PCLOQ9Y6V0 5065 aa2.06□□□□□ -2.08
MCF2-202ENST00000370573 IGKV3D-7A0A0C4DH55 119 aa2.06□□□□□ -2.08
MCF2-202ENST00000370573 TRBV7-4A0A0J9YYF1 115 aa2.06□□□□□ -2.08
MCF2-202ENST00000370573 FAM229BQ4G0N7 80 aa2.06□□□□□ -2.08
MCF2-202ENST00000370573 IGFL1Q6UW32 110 aa2.06□□□□□ -2.08
MCF2-202ENST00000370573 Q6ZQT0 140 aa2.06□□□□□ -2.08
MCF2-202ENST00000370573 LOC110117498A0A087WWA1 95 aa2.06□□□□□ -2.08
MCF2-202ENST00000370573 A0A1W2PNM2 257 aa2.06□□□□□ -2.08
MCF2-202ENST00000370573 MOBPQ13875 183 aa2.06□□□□□ -2.08
MCF2-202ENST00000370573 ATP11AUNQ6ZP68 121 aa2.06□□□□□ -2.08
MCF2-202ENST00000370573 CAMK2N1Q7Z7J9 78 aa2.06□□□□□ -2.08
MCF2-202ENST00000370573 ABCA13Q86UQ4 5058 aa2.06□□□□□ -2.08
MCF2-202ENST00000370573 A0A1B0GVX0 72 aa2.05□□□□□ -2.08
MCF2-202ENST00000370573 CYP4F30PQ9H0H9 118 aa2.05□□□□□ -2.08
MCF2-202ENST00000370573 MYCBP2O75592 4640 aa2.05□□□□□ -2.08
MCF2-202ENST00000370573 C8orf17Q9NRJ1 99 aa2.05□□□□□ -2.08
MCF2-202ENST00000370573 TNXBP22105 4242 aa2.05□□□□□ -2.08
MCF2-202ENST00000370573 A0A087WVE0 104 aa2.04□□□□□ -2.08
MCF2-202ENST00000370573 ASB16-AS1Q495Z4 193 aa2.04□□□□□ -2.08
MCF2-202ENST00000370573 SSBP3-AS1Q7Z2R9 100 aa2.04□□□□□ -2.08
MCF2-202ENST00000370573 TMEM254Q8TBM7 123 aa2.04□□□□□ -2.08
MCF2-202ENST00000370573 hDV103S1A0JD37 113 aa2.04□□□□□ -2.08
MCF2-202ENST00000370573 KRTAP10-8P60410 259 aa2.04□□□□□ -2.08
MCF2-202ENST00000370573 LIMD2Q9BT23 127 aa2.04□□□□□ -2.08
MCF2-202ENST00000370573 NDUFB1O75438 58 aa2.04□□□□□ -2.08
MCF2-202ENST00000370573 LCA10Q71F78 164 aa2.04□□□□□ -2.08
MCF2-202ENST00000370573 A0A1B0GW54 56 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms