RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 C7orf65Q6ZTY9 151 aa6.1□□□□□ -1.43
PRPF38B-203ENST00000370025 IGHV6-1A0A0B4J1U7 121 aa6.1□□□□□ -1.43
PRPF38B-203ENST00000370025 Q75L30 129 aa6.1□□□□□ -1.43
PRPF38B-203ENST00000370025 A0A1B0GW54 56 aa6.09□□□□□ -1.43
PRPF38B-203ENST00000370025 CDC42SE1Q9NRR8 79 aa6.09□□□□□ -1.43
PRPF38B-203ENST00000370025 KRTAP13-1Q8IUC0 172 aa6.08□□□□□ -1.44
PRPF38B-203ENST00000370025 DNAH2Q9P225 4427 aa6.08□□□□□ -1.44
PRPF38B-203ENST00000370025 SPRR1BP22528 89 aa6.08□□□□□ -1.44
PRPF38B-203ENST00000370025 DNAH6Q9C0G6 4158 aa6.08□□□□□ -1.44
PRPF38B-203ENST00000370025 KRTAP10-2P60368 255 aa6.07□□□□□ -1.44
PRPF38B-203ENST00000370025 C8orf87E5RJ46 101 aa6.07□□□□□ -1.44
PRPF38B-203ENST00000370025 PSORS1C2Q9UIG4 136 aa6.07□□□□□ -1.44
PRPF38B-203ENST00000370025 ALMS1Q8TCU4 4167 aa6.07□□□□□ -1.44
PRPF38B-203ENST00000370025 DNAH17Q9UFH2 4485 aa6.07□□□□□ -1.44
PRPF38B-203ENST00000370025 IGLV8-61A0A075B6I0 122 aa6.06□□□□□ -1.44
PRPF38B-203ENST00000370025 LINC00313P59037 77 aa6.06□□□□□ -1.44
PRPF38B-203ENST00000370025 SPANXA2-OT1Q8N9U9 137 aa6.05□□□□□ -1.44
PRPF38B-203ENST00000370025 H3BS24 57 aa6.05□□□□□ -1.44
PRPF38B-203ENST00000370025 PRR26Q8N8Z3 221 aa6.05□□□□□ -1.44
PRPF38B-203ENST00000370025 KRTAP29-1A8MX34 341 aaPredicted RBP6.04□□□□□ -1.44
PRPF38B-203ENST00000370025 ZNF706Q9Y5V0 76 aaPredicted RBP6.04□□□□□ -1.44
PRPF38B-203ENST00000370025 HECTD4Q9Y4D8 3996 aa6.04□□□□□ -1.44
PRPF38B-203ENST00000370025 CIRBP-AS1Q8TBR5 109 aa6.03□□□□□ -1.44
PRPF38B-203ENST00000370025 ZNF861PO60384 105 aa6.03□□□□□ -1.44
PRPF38B-203ENST00000370025 KRTAP10-1P60331 282 aa6.01□□□□□ -1.45
PRPF38B-203ENST00000370025 IGLV7-46A0A075B6I9 117 aa6□□□□□ -1.45
PRPF38B-203ENST00000370025 A8MWP4 228 aa6□□□□□ -1.45
PRPF38B-203ENST00000370025 IGLV7-43P04211 117 aa6□□□□□ -1.45
PRPF38B-203ENST00000370025 Q6ZSA8 131 aa5.99□□□□□ -1.45
PRPF38B-203ENST00000370025 LINC00483Q53H64 154 aa5.99□□□□□ -1.45
PRPF38B-203ENST00000370025 HRES1P13985 223 aa5.98□□□□□ -1.45
PRPF38B-203ENST00000370025 LINC01558Q9Y6Z2 57 aa5.97□□□□□ -1.45
PRPF38B-203ENST00000370025 H3BPC8 53 aa5.96□□□□□ -1.46
PRPF38B-203ENST00000370025 MMP24-AS1A0A0U1RRL7 71 aa5.96□□□□□ -1.46
PRPF38B-203ENST00000370025 FRAS1Q86XX4 4008 aa5.96□□□□□ -1.46
PRPF38B-203ENST00000370025 HYDINQ4G0P3 5121 aa5.95□□□□□ -1.46
PRPF38B-203ENST00000370025 LINC00472Q9H8W2 130 aa5.94□□□□□ -1.46
PRPF38B-203ENST00000370025 DNAH11Q96DT5 4516 aa5.94□□□□□ -1.46
PRPF38B-203ENST00000370025 DNAH8Q96JB1 4490 aa5.93□□□□□ -1.46
PRPF38B-203ENST00000370025 DNAH5Q8TE73 4624 aa5.93□□□□□ -1.46
PRPF38B-203ENST00000370025 LINC01554Q52M75 96 aa5.92□□□□□ -1.46
PRPF38B-203ENST00000370025 FLG2Q5D862 2391 aaPredicted RBP5.92□□□□□ -1.46
PRPF38B-203ENST00000370025 FAT2Q9NYQ8 4349 aa5.9□□□□□ -1.46
PRPF38B-203ENST00000370025 A0A087X002 238 aa5.89□□□□□ -1.47
PRPF38B-203ENST00000370025 NOTCH2NLQ7Z3S9 236 aa5.89□□□□□ -1.47
PRPF38B-203ENST00000370025 PKD1P98161 4303 aa5.89□□□□□ -1.47
PRPF38B-203ENST00000370025 SPINK1P00995 79 aa5.88□□□□□ -1.47
PRPF38B-203ENST00000370025 DMBT1Q9UGM3 2413 aaPredicted RBP5.88□□□□□ -1.47
PRPF38B-203ENST00000370025 SACSQ9NZJ4 4579 aa5.88□□□□□ -1.47
PRPF38B-203ENST00000370025 C8orf17Q9NRJ1 99 aa5.87□□□□□ -1.47
PRPF38B-203ENST00000370025 CSAG1Q6PB30 78 aa5.86□□□□□ -1.47
PRPF38B-203ENST00000370025 SSBP3-AS1Q7Z2R9 100 aa5.86□□□□□ -1.47
PRPF38B-203ENST00000370025 A0A1B0GVY2 172 aa5.86□□□□□ -1.47
PRPF38B-203ENST00000370025 A0A1B0GU69 56 aa5.85□□□□□ -1.47
PRPF38B-203ENST00000370025 IGKV2D-30A0A075B6S6 120 aa5.85□□□□□ -1.47
PRPF38B-203ENST00000370025 IGKV2-30P06310 120 aa5.85□□□□□ -1.47
PRPF38B-203ENST00000370025 TP53AIP1Q9HCN2 124 aa5.83□□□□□ -1.48
PRPF38B-203ENST00000370025 Q5W150 140 aa5.82□□□□□ -1.48
PRPF38B-203ENST00000370025 MRPL34Q9BQ48 92 aaKnown RBP5.81□□□□□ -1.48
PRPF38B-203ENST00000370025 Q96NJ1 140 aa5.8□□□□□ -1.48
PRPF38B-203ENST00000370025 LRP1BQ9NZR2 4599 aa5.8□□□□□ -1.48
PRPF38B-203ENST00000370025 A0A1B0GVX0 72 aa5.79□□□□□ -1.48
PRPF38B-203ENST00000370025 SMR3BP02814 79 aaPredicted RBP5.79□□□□□ -1.48
PRPF38B-203ENST00000370025 MIR22HGQ0VDD5 57 aa5.79□□□□□ -1.48
PRPF38B-203ENST00000370025 KRTAP13-2Q52LG2 175 aa5.79□□□□□ -1.48
PRPF38B-203ENST00000370025 PLA2G1BP04054 148 aaKnown RBP5.78□□□□□ -1.48
PRPF38B-203ENST00000370025 KRTAP1-4P0C5Y4 121 aa5.78□□□□□ -1.48
PRPF38B-203ENST00000370025 ACYP2P14621 99 aa5.78□□□□□ -1.48
PRPF38B-203ENST00000370025 ASB16-AS1Q495Z4 193 aa5.75□□□□□ -1.49
PRPF38B-203ENST00000370025 TYMSOSQ8TAI1 123 aa5.75□□□□□ -1.49
PRPF38B-203ENST00000370025 RYR2Q92736 4967 aa5.74□□□□□ -1.49
PRPF38B-203ENST00000370025 PKHD1P08F94 4074 aa5.74□□□□□ -1.49
PRPF38B-203ENST00000370025 UQCR11O14957 56 aa5.73□□□□□ -1.49
PRPF38B-203ENST00000370025 DYNC1H1Q14204 4646 aaKnown RBP5.73□□□□□ -1.49
PRPF38B-203ENST00000370025 CRIPTQ9P021 101 aa5.72□□□□□ -1.49
PRPF38B-203ENST00000370025 VPS13BQ7Z7G8 4022 aa5.72□□□□□ -1.49
PRPF38B-203ENST00000370025 KMT2CQ8NEZ4 4911 aaKnown RBP5.69□□□□□ -1.5
PRPF38B-203ENST00000370025 SPATA8Q6RVD6 105 aa5.69□□□□□ -1.5
PRPF38B-203ENST00000370025 KRTAP10-4P60372 401 aaPredicted RBP5.68□□□□□ -1.5
PRPF38B-203ENST00000370025 FAM229AH3BQW9 127 aa5.67□□□□□ -1.5
PRPF38B-203ENST00000370025 Q8N1X5 172 aa5.67□□□□□ -1.5
PRPF38B-203ENST00000370025 LINC00304Q8N9R0 145 aa5.67□□□□□ -1.5
PRPF38B-203ENST00000370025 C9orf92A6NGG3 77 aa5.66□□□□□ -1.5
PRPF38B-203ENST00000370025 APOBP04114 4563 aaKnown RBP5.65□□□□□ -1.51
PRPF38B-203ENST00000370025 RPS29P62273 56 aaKnown RBP5.63□□□□□ -1.51
PRPF38B-203ENST00000370025 DMAC1Q96GE9 116 aa5.63□□□□□ -1.51
PRPF38B-203ENST00000370025 FAT1Q14517 4588 aa5.6□□□□□ -1.51
PRPF38B-203ENST00000370025 Q5VSD8 79 aa5.6□□□□□ -1.51
PRPF38B-203ENST00000370025 KRTAP13-3Q3SY46 172 aa5.58□□□□□ -1.52
PRPF38B-203ENST00000370025 RYR3Q15413 4870 aa5.54□□□□□ -1.52
PRPF38B-203ENST00000370025 ROMO1P60602 79 aa5.54□□□□□ -1.52
PRPF38B-203ENST00000370025 KRTAP16-1A8MUX0 517 aa5.53□□□□□ -1.52
PRPF38B-203ENST00000370025 KRTAP25-1Q3LHN0 102 aa5.51□□□□□ -1.53
PRPF38B-203ENST00000370025 KRTAP10-8P60410 259 aa5.5□□□□□ -1.53
PRPF38B-203ENST00000370025 HSPG2P98160 4391 aa5.48□□□□□ -1.53
PRPF38B-203ENST00000370025 PKHD1L1Q86WI1 4243 aa5.48□□□□□ -1.53
PRPF38B-203ENST00000370025 A8MUU9 505 aa5.47□□□□□ -1.53
PRPF38B-203ENST00000370025 H0YAA0 97 aa5.47□□□□□ -1.53
PRPF38B-203ENST00000370025 RYR1P21817 5038 aa5.46□□□□□ -1.54
PRPF38B-203ENST00000370025 KRTAP17-1Q9BYP8 105 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms