RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 FBN1P35555 2871 aaKnown RBP9.54□□□□□ -0.88
CHD1L-203ENST00000369259 UQCR11O14957 56 aa9.53□□□□□ -0.88
CHD1L-203ENST00000369259 ZNF706Q9Y5V0 76 aaPredicted RBP9.53□□□□□ -0.88
CHD1L-203ENST00000369259 SPINK6Q6UWN8 80 aa9.5□□□□□ -0.89
CHD1L-203ENST00000369259 LYSTQ99698 3801 aa9.49□□□□□ -0.89
CHD1L-203ENST00000369259 ANAPC11Q9NYG5 84 aa9.48□□□□□ -0.89
CHD1L-203ENST00000369259 CSAG1Q6PB30 78 aa9.46□□□□□ -0.89
CHD1L-203ENST00000369259 UBE2DNLQ8IWF7 75 aa9.45□□□□□ -0.9
CHD1L-203ENST00000369259 RETNLBQ9BQ08 111 aa9.45□□□□□ -0.9
CHD1L-203ENST00000369259 DNAH9Q9NYC9 4486 aa9.43□□□□□ -0.9
CHD1L-203ENST00000369259 SPACA4Q8TDM5 124 aa9.43□□□□□ -0.9
CHD1L-203ENST00000369259 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.43□□□□□ -0.9
CHD1L-203ENST00000369259 COL7A1Q02388 2944 aa9.42□□□□□ -0.9
CHD1L-203ENST00000369259 FAM229AH3BQW9 127 aa9.42□□□□□ -0.9
CHD1L-203ENST00000369259 IGKV2-30P06310 120 aa9.4□□□□□ -0.9
CHD1L-203ENST00000369259 DNAH3Q8TD57 4116 aa9.4□□□□□ -0.91
CHD1L-203ENST00000369259 CMYA5Q8N3K9 4069 aa9.39□□□□□ -0.91
CHD1L-203ENST00000369259 PSORS1C2Q9UIG4 136 aa9.38□□□□□ -0.91
CHD1L-203ENST00000369259 HUWE1Q7Z6Z7 4374 aaKnown RBP9.37□□□□□ -0.91
CHD1L-203ENST00000369259 IGLV5-52A0A0A0MRZ9 124 aa9.36□□□□□ -0.91
CHD1L-203ENST00000369259 ZNF861PO60384 105 aa9.36□□□□□ -0.91
CHD1L-203ENST00000369259 NOTCH1P46531 2555 aa9.35□□□□□ -0.91
CHD1L-203ENST00000369259 APLNQ9ULZ1 77 aa9.34□□□□□ -0.91
CHD1L-203ENST00000369259 CIRBP-AS1Q8TBR5 109 aa9.33□□□□□ -0.92
CHD1L-203ENST00000369259 COL6A5A8TX70 2615 aa9.32□□□□□ -0.92
CHD1L-203ENST00000369259 NBEAL1Q6ZS30 2694 aa9.32□□□□□ -0.92
CHD1L-203ENST00000369259 IGLV7-43P04211 117 aa9.3□□□□□ -0.92
CHD1L-203ENST00000369259 Q6ZRN7 208 aaPredicted RBP9.3□□□□□ -0.92
CHD1L-203ENST00000369259 NBDYA0A0U1RRE5 68 aa9.29□□□□□ -0.92
CHD1L-203ENST00000369259 KRTAP24-1Q3LI83 254 aa9.28□□□□□ -0.92
CHD1L-203ENST00000369259 STAB1Q9NY15 2570 aa9.26□□□□□ -0.93
CHD1L-203ENST00000369259 DNAH8Q96JB1 4490 aa9.25□□□□□ -0.93
CHD1L-203ENST00000369259 IGKV2D-30A0A075B6S6 120 aa9.22□□□□□ -0.93
CHD1L-203ENST00000369259 SSBP3-AS1Q7Z2R9 100 aa9.22□□□□□ -0.93
CHD1L-203ENST00000369259 C1orf134Q5TEV5 83 aa9.2□□□□□ -0.94
CHD1L-203ENST00000369259 FRAS1Q86XX4 4008 aa9.19□□□□□ -0.94
CHD1L-203ENST00000369259 KRTAP16-1A8MUX0 517 aa9.19□□□□□ -0.94
CHD1L-203ENST00000369259 STAB2Q8WWQ8 2551 aa9.18□□□□□ -0.94
CHD1L-203ENST00000369259 A0A087WTM6 91 aa9.16□□□□□ -0.94
CHD1L-203ENST00000369259 KRTAP25-1Q3LHN0 102 aa9.15□□□□□ -0.94
CHD1L-203ENST00000369259 A8MUU9 505 aa9.15□□□□□ -0.95
CHD1L-203ENST00000369259 DNAH7Q8WXX0 4024 aa9.15□□□□□ -0.95
CHD1L-203ENST00000369259 SPINK1P00995 79 aa9.14□□□□□ -0.95
CHD1L-203ENST00000369259 LY6G6CO95867 125 aa9.13□□□□□ -0.95
CHD1L-203ENST00000369259 DYNC2H1Q8NCM8 4307 aaKnown RBP9.1□□□□□ -0.95
CHD1L-203ENST00000369259 ROMO1P60602 79 aa9.09□□□□□ -0.95
CHD1L-203ENST00000369259 H0YAA0 97 aa9.09□□□□□ -0.95
CHD1L-203ENST00000369259 Q6ZSA8 131 aa9.09□□□□□ -0.95
CHD1L-203ENST00000369259 LINC00304Q8N9R0 145 aa9.08□□□□□ -0.96
CHD1L-203ENST00000369259 PLECQ15149 4684 aaKnown RBP9.04□□□□□ -0.96
CHD1L-203ENST00000369259 HECTD4Q9Y4D8 3996 aa9.04□□□□□ -0.96
CHD1L-203ENST00000369259 Q8N1X5 172 aa9.04□□□□□ -0.96
CHD1L-203ENST00000369259 KRTAP13-2Q52LG2 175 aa9.01□□□□□ -0.97
CHD1L-203ENST00000369259 KRTAP21-3Q3LHN1 58 aa9□□□□□ -0.97
CHD1L-203ENST00000369259 NUPR2A6NF83 97 aa8.99□□□□□ -0.97
CHD1L-203ENST00000369259 DNAH17Q9UFH2 4485 aa8.99□□□□□ -0.97
CHD1L-203ENST00000369259 MEGF8Q7Z7M0 2845 aa8.98□□□□□ -0.97
CHD1L-203ENST00000369259 A0A1B0GU33 70 aa8.97□□□□□ -0.97
CHD1L-203ENST00000369259 TYMSOSQ8TAI1 123 aa8.97□□□□□ -0.97
CHD1L-203ENST00000369259 TGP01266 2768 aa8.96□□□□□ -0.98
CHD1L-203ENST00000369259 VPS13DQ5THJ4 4388 aa8.95□□□□□ -0.98
CHD1L-203ENST00000369259 MGAM2Q2M2H8 2515 aa8.92□□□□□ -0.98
CHD1L-203ENST00000369259 DNHD1Q96M86 4753 aa8.92□□□□□ -0.98
CHD1L-203ENST00000369259 H1FX-AS1Q4G0G2 97 aa8.91□□□□□ -0.98
CHD1L-203ENST00000369259 CRIPTQ9P021 101 aa8.85□□□□□ -0.99
CHD1L-203ENST00000369259 P0C880 135 aa8.84□□□□□ -0.99
CHD1L-203ENST00000369259 K7ERS5 55 aa8.83□□□□□ -1
CHD1L-203ENST00000369259 DNAH2Q9P225 4427 aa8.81□□□□□ -1
CHD1L-203ENST00000369259 FLG2Q5D862 2391 aaPredicted RBP8.8□□□□□ -1
CHD1L-203ENST00000369259 KRTAP1-4P0C5Y4 121 aa8.79□□□□□ -1
CHD1L-203ENST00000369259 STARD9Q9P2P6 4700 aa8.78□□□□□ -1
CHD1L-203ENST00000369259 FBN3Q75N90 2809 aa8.77□□□□□ -1
CHD1L-203ENST00000369259 KRTAP3-1Q9BYR8 98 aa8.77□□□□□ -1.01
CHD1L-203ENST00000369259 DNAH11Q96DT5 4516 aa8.76□□□□□ -1.01
CHD1L-203ENST00000369259 KMT2AQ03164 3969 aa8.74□□□□□ -1.01
CHD1L-203ENST00000369259 COX6B2Q6YFQ2 88 aa8.71□□□□□ -1.01
CHD1L-203ENST00000369259 PRKDCP78527 4128 aaKnown RBP8.69□□□□□ -1.02
CHD1L-203ENST00000369259 KRTAP10-2P60368 255 aa8.68□□□□□ -1.02
CHD1L-203ENST00000369259 DNAH6Q9C0G6 4158 aa8.67□□□□□ -1.02
CHD1L-203ENST00000369259 DNAH5Q8TE73 4624 aa8.63□□□□□ -1.03
CHD1L-203ENST00000369259 SPINT4Q6UDR6 99 aa8.62□□□□□ -1.03
CHD1L-203ENST00000369259 LRP1BQ9NZR2 4599 aa8.62□□□□□ -1.03
CHD1L-203ENST00000369259 C20orf166-AS1Q96NR2 134 aa8.61□□□□□ -1.03
CHD1L-203ENST00000369259 RPL37P61927 97 aaKnown RBP8.58□□□□□ -1.04
CHD1L-203ENST00000369259 RPS29P62273 56 aaKnown RBP8.58□□□□□ -1.04
CHD1L-203ENST00000369259 KRTAP10-1P60331 282 aa8.57□□□□□ -1.04
CHD1L-203ENST00000369259 TPRXLQ17RH7 258 aa8.57□□□□□ -1.04
CHD1L-203ENST00000369259 C9orf92A6NGG3 77 aa8.56□□□□□ -1.04
CHD1L-203ENST00000369259 VPS13BQ7Z7G8 4022 aa8.49□□□□□ -1.05
CHD1L-203ENST00000369259 KRTAP15-1Q3LI76 137 aa8.48□□□□□ -1.05
CHD1L-203ENST00000369259 KRTAP10-6P60371 365 aaPredicted RBP8.47□□□□□ -1.05
CHD1L-203ENST00000369259 A0A0D9SG42 100 aa8.46□□□□□ -1.06
CHD1L-203ENST00000369259 NDUFAF8A1L188 74 aa8.46□□□□□ -1.06
CHD1L-203ENST00000369259 KRTAP13-4Q3LI77 160 aa8.46□□□□□ -1.06
CHD1L-203ENST00000369259 C10orf95Q9H7T3 257 aa8.44□□□□□ -1.06
CHD1L-203ENST00000369259 KRTAP3-2Q9BYR7 98 aa8.36□□□□□ -1.07
CHD1L-203ENST00000369259 PKD1P98161 4303 aa8.36□□□□□ -1.07
CHD1L-203ENST00000369259 KRTAP3-3Q9BYR6 98 aa8.35□□□□□ -1.07
CHD1L-203ENST00000369259 SACSQ9NZJ4 4579 aa8.31□□□□□ -1.08
CHD1L-203ENST00000369259 S4R3F8 94 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms