RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 VWFP04275 2813 aa6.66□□□□□ -1.34
EBF3-202ENST00000368648 ZNF861PO60384 105 aa6.66□□□□□ -1.34
EBF3-202ENST00000368648 CSAG1Q6PB30 78 aa6.64□□□□□ -1.35
EBF3-202ENST00000368648 KRTAP21-3Q3LHN1 58 aa6.64□□□□□ -1.35
EBF3-202ENST00000368648 LINC01558Q9Y6Z2 57 aa6.64□□□□□ -1.35
EBF3-202ENST00000368648 KRTAP1-5Q9BYS1 174 aa6.63□□□□□ -1.35
EBF3-202ENST00000368648 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.63□□□□□ -1.35
EBF3-202ENST00000368648 SPRR1AP35321 89 aa6.62□□□□□ -1.35
EBF3-202ENST00000368648 ADM2Q7Z4H4 148 aa6.62□□□□□ -1.35
EBF3-202ENST00000368648 LINC00472Q9H8W2 130 aa6.62□□□□□ -1.35
EBF3-202ENST00000368648 A0A0D9SG42 100 aa6.61□□□□□ -1.35
EBF3-202ENST00000368648 C9orf92A6NGG3 77 aa6.61□□□□□ -1.35
EBF3-202ENST00000368648 ZCCHC13Q8WW36 166 aaKnown RBP6.61□□□□□ -1.35
EBF3-202ENST00000368648 KRTAP26-1Q6PEX3 210 aa6.61□□□□□ -1.35
EBF3-202ENST00000368648 IGLV7-43P04211 117 aa6.6□□□□□ -1.35
EBF3-202ENST00000368648 IGLV5-37A0A075B6J1 123 aa6.6□□□□□ -1.35
EBF3-202ENST00000368648 LINC00304Q8N9R0 145 aa6.57□□□□□ -1.36
EBF3-202ENST00000368648 A0A087X002 238 aa6.55□□□□□ -1.36
EBF3-202ENST00000368648 NOTCH2NLQ7Z3S9 236 aa6.55□□□□□ -1.36
EBF3-202ENST00000368648 KRTAP29-1A8MX34 341 aaPredicted RBP6.53□□□□□ -1.36
EBF3-202ENST00000368648 KRTAP4-16G5E9R7 235 aaPredicted RBP6.53□□□□□ -1.36
EBF3-202ENST00000368648 TENM2Q9NT68 2774 aa6.52□□□□□ -1.36
EBF3-202ENST00000368648 PANO1I0J062 215 aa6.5□□□□□ -1.37
EBF3-202ENST00000368648 KRTAP11-1Q8IUC1 163 aa6.5□□□□□ -1.37
EBF3-202ENST00000368648 LCE6AA0A183 80 aa6.49□□□□□ -1.37
EBF3-202ENST00000368648 SRRM2Q9UQ35 2752 aaKnown RBP6.49□□□□□ -1.37
EBF3-202ENST00000368648 KRTAP7-1Q8IUC3 87 aa6.48□□□□□ -1.37
EBF3-202ENST00000368648 A6NN06 94 aa6.48□□□□□ -1.37
EBF3-202ENST00000368648 KRTAP10-2P60368 255 aa6.48□□□□□ -1.37
EBF3-202ENST00000368648 AKAP9Q99996 3911 aa6.48□□□□□ -1.37
EBF3-202ENST00000368648 Q5W150 140 aa6.47□□□□□ -1.37
EBF3-202ENST00000368648 ZNF469Q96JG9 3925 aaPredicted RBP6.45□□□□□ -1.38
EBF3-202ENST00000368648 A0A1B0GU33 70 aa6.43□□□□□ -1.38
EBF3-202ENST00000368648 KRTAP10-1P60331 282 aa6.43□□□□□ -1.38
EBF3-202ENST00000368648 TRRAPQ9Y4A5 3859 aa6.42□□□□□ -1.38
EBF3-202ENST00000368648 COX6B2Q6YFQ2 88 aa6.42□□□□□ -1.38
EBF3-202ENST00000368648 PLAC8Q9NZF1 115 aa6.41□□□□□ -1.38
EBF3-202ENST00000368648 SPRR1BP22528 89 aa6.4□□□□□ -1.39
EBF3-202ENST00000368648 ANK3Q12955 4377 aaKnown RBP6.37□□□□□ -1.39
EBF3-202ENST00000368648 Q6ZR54 194 aa6.37□□□□□ -1.39
EBF3-202ENST00000368648 FBN3Q75N90 2809 aa6.35□□□□□ -1.39
EBF3-202ENST00000368648 SPATA8Q6RVD6 105 aa6.35□□□□□ -1.39
EBF3-202ENST00000368648 Q5VSD8 79 aa6.34□□□□□ -1.39
EBF3-202ENST00000368648 DMAC1Q96GE9 116 aa6.32□□□□□ -1.4
EBF3-202ENST00000368648 COL7A1Q02388 2944 aa6.26□□□□□ -1.41
EBF3-202ENST00000368648 Q6ZRN7 208 aaPredicted RBP6.25□□□□□ -1.41
EBF3-202ENST00000368648 Q6ZSA8 131 aa6.22□□□□□ -1.41
EBF3-202ENST00000368648 CSMD3Q7Z407 3707 aa6.2□□□□□ -1.42
EBF3-202ENST00000368648 MEGF8Q7Z7M0 2845 aa6.17□□□□□ -1.42
EBF3-202ENST00000368648 LINC00483Q53H64 154 aa6.16□□□□□ -1.42
EBF3-202ENST00000368648 H1FX-AS1Q4G0G2 97 aa6.15□□□□□ -1.43
EBF3-202ENST00000368648 KRTAP25-1Q3LHN0 102 aa6.14□□□□□ -1.43
EBF3-202ENST00000368648 NDUFAF8A1L188 74 aa6.13□□□□□ -1.43
EBF3-202ENST00000368648 RPL37P61927 97 aaKnown RBP6.12□□□□□ -1.43
EBF3-202ENST00000368648 ROMO1P60602 79 aa6.12□□□□□ -1.43
EBF3-202ENST00000368648 DNHD1Q96M86 4753 aa6.12□□□□□ -1.43
EBF3-202ENST00000368648 M0R2T5 61 aa6.11□□□□□ -1.43
EBF3-202ENST00000368648 KRTAP13-1Q8IUC0 172 aa6.09□□□□□ -1.44
EBF3-202ENST00000368648 LUZP6Q538Z0 58 aa6.08□□□□□ -1.44
EBF3-202ENST00000368648 A8MUU9 505 aa6.05□□□□□ -1.44
EBF3-202ENST00000368648 ASB16-AS1Q495Z4 193 aa6.05□□□□□ -1.44
EBF3-202ENST00000368648 KRTAP13-2Q52LG2 175 aa6.04□□□□□ -1.44
EBF3-202ENST00000368648 C10orf95Q9H7T3 257 aa6.02□□□□□ -1.45
EBF3-202ENST00000368648 SEC61BP60468 96 aaKnown RBP6□□□□□ -1.45
EBF3-202ENST00000368648 S4R3F8 94 aa6□□□□□ -1.45
EBF3-202ENST00000368648 CAMK2N1Q7Z7J9 78 aa5.99□□□□□ -1.45
EBF3-202ENST00000368648 KRTAP16-1A8MUX0 517 aa5.95□□□□□ -1.46
EBF3-202ENST00000368648 H0YAA0 97 aa5.95□□□□□ -1.46
EBF3-202ENST00000368648 R4GN34 69 aa5.94□□□□□ -1.46
EBF3-202ENST00000368648 M0QZ58 72 aa5.9□□□□□ -1.47
EBF3-202ENST00000368648 A0A0A0MQY5 61 aa5.85□□□□□ -1.47
EBF3-202ENST00000368648 C20orf166-AS1Q96NR2 134 aa5.8□□□□□ -1.48
EBF3-202ENST00000368648 KRTAP1-4P0C5Y4 121 aa5.78□□□□□ -1.48
EBF3-202ENST00000368648 KRTAP13-3Q3SY46 172 aa5.78□□□□□ -1.48
EBF3-202ENST00000368648 RPS29P62273 56 aaKnown RBP5.77□□□□□ -1.49
EBF3-202ENST00000368648 DNAH10Q8IVF4 4471 aa5.75□□□□□ -1.49
EBF3-202ENST00000368648 HUWE1Q7Z6Z7 4374 aaKnown RBP5.72□□□□□ -1.49
EBF3-202ENST00000368648 PRKDCP78527 4128 aaKnown RBP5.72□□□□□ -1.49
EBF3-202ENST00000368648 DNAH9Q9NYC9 4486 aa5.69□□□□□ -1.5
EBF3-202ENST00000368648 P0C880 135 aa5.69□□□□□ -1.5
EBF3-202ENST00000368648 A0A1B0GVY2 172 aa5.69□□□□□ -1.5
EBF3-202ENST00000368648 LYSTQ99698 3801 aa5.67□□□□□ -1.5
EBF3-202ENST00000368648 ANK2Q01484 3957 aa5.66□□□□□ -1.5
EBF3-202ENST00000368648 KRTAP10-8P60410 259 aa5.62□□□□□ -1.51
EBF3-202ENST00000368648 XP32Q5T750 250 aa5.6□□□□□ -1.51
EBF3-202ENST00000368648 PLAC4Q8WY50 150 aa5.6□□□□□ -1.51
EBF3-202ENST00000368648 TPRXLQ17RH7 258 aa5.6□□□□□ -1.51
EBF3-202ENST00000368648 KRTAP3-1Q9BYR8 98 aa5.54□□□□□ -1.52
EBF3-202ENST00000368648 PLECQ15149 4684 aaKnown RBP5.53□□□□□ -1.52
EBF3-202ENST00000368648 KRTAP12-2P59991 146 aa5.52□□□□□ -1.53
EBF3-202ENST00000368648 STARD9Q9P2P6 4700 aa5.51□□□□□ -1.53
EBF3-202ENST00000368648 FRAS1Q86XX4 4008 aa5.49□□□□□ -1.53
EBF3-202ENST00000368648 KRTAP13-4Q3LI77 160 aa5.48□□□□□ -1.53
EBF3-202ENST00000368648 KRTAP4-5Q9BYR2 181 aa5.48□□□□□ -1.53
EBF3-202ENST00000368648 KIAA1109Q2LD37 5005 aa5.41□□□□□ -1.54
EBF3-202ENST00000368648 KMT2CQ8NEZ4 4911 aaKnown RBP5.38□□□□□ -1.55
EBF3-202ENST00000368648 CMYA5Q8N3K9 4069 aa5.37□□□□□ -1.55
EBF3-202ENST00000368648 KRTAP12-1P59990 96 aa5.37□□□□□ -1.55
EBF3-202ENST00000368648 DNAH8Q96JB1 4490 aa5.36□□□□□ -1.55
EBF3-202ENST00000368648 DNAH5Q8TE73 4624 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms