RNA–Protein interactions for RNA: ENST00000368396.8

MUC1-209, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-209ENST00000368396 A0A1B0GVX0 72 aa4.6□□□□□ -1.67
MUC1-209ENST00000368396 KRTAP10-4P60372 401 aaPredicted RBP4.6□□□□□ -1.67
MUC1-209ENST00000368396 TMEM254Q8TBM7 123 aa4.6□□□□□ -1.67
MUC1-209ENST00000368396 RYR3Q15413 4870 aa4.6□□□□□ -1.67
MUC1-209ENST00000368396 A0A0U1RQV1 116 aa4.59□□□□□ -1.67
MUC1-209ENST00000368396 CDK2AP2O75956 126 aa4.59□□□□□ -1.67
MUC1-209ENST00000368396 SMR3BP02814 79 aaPredicted RBP4.59□□□□□ -1.67
MUC1-209ENST00000368396 PLA2G1BP04054 148 aaKnown RBP4.59□□□□□ -1.67
MUC1-209ENST00000368396 TMEM258P61165 79 aa4.59□□□□□ -1.67
MUC1-209ENST00000368396 C8orf17Q9NRJ1 99 aa4.59□□□□□ -1.67
MUC1-209ENST00000368396 hDV103S1A0JD37 113 aa4.58□□□□□ -1.68
MUC1-209ENST00000368396 NDUFC1O43677 76 aa4.58□□□□□ -1.68
MUC1-209ENST00000368396 SNURFQ9Y675 71 aa4.58□□□□□ -1.68
MUC1-209ENST00000368396 H7BZZ5 65 aa4.57□□□□□ -1.68
MUC1-209ENST00000368396 C5orf47Q569G3 176 aa4.57□□□□□ -1.68
MUC1-209ENST00000368396 HSPG2P98160 4391 aa4.56□□□□□ -1.68
MUC1-209ENST00000368396 IGHV6-1A0A0B4J1U7 121 aa4.56□□□□□ -1.68
MUC1-209ENST00000368396 TYMSOSQ8TAI1 123 aa4.56□□□□□ -1.68
MUC1-209ENST00000368396 LIMD2Q9BT23 127 aa4.56□□□□□ -1.68
MUC1-209ENST00000368396 C1orf195Q5TG92 126 aa4.55□□□□□ -1.68
MUC1-209ENST00000368396 ZCCHC13Q8WW36 166 aaKnown RBP4.55□□□□□ -1.68
MUC1-209ENST00000368396 C8orf87E5RJ46 101 aa4.54□□□□□ -1.68
MUC1-209ENST00000368396 SPINK1P00995 79 aa4.54□□□□□ -1.68
MUC1-209ENST00000368396 NOTCH2NLQ7Z3S9 236 aa4.54□□□□□ -1.68
MUC1-209ENST00000368396 RYR1P21817 5038 aa4.54□□□□□ -1.68
MUC1-209ENST00000368396 H3BPC8 53 aa4.53□□□□□ -1.68
MUC1-209ENST00000368396 MP68P56378 58 aa4.53□□□□□ -1.68
MUC1-209ENST00000368396 RPS29P62273 56 aaKnown RBP4.53□□□□□ -1.68
MUC1-209ENST00000368396 SPAG11AQ6PDA7 123 aa4.53□□□□□ -1.68
MUC1-209ENST00000368396 PRR26Q8N8Z3 221 aa4.53□□□□□ -1.68
MUC1-209ENST00000368396 MRPL34Q9BQ48 92 aaKnown RBP4.53□□□□□ -1.68
MUC1-209ENST00000368396 TP53AIP1Q9HCN2 124 aa4.53□□□□□ -1.68
MUC1-209ENST00000368396 FAM236DA0A1B0GTK5 79 aa4.52□□□□□ -1.69
MUC1-209ENST00000368396 FAM236CP0DP71 79 aa4.52□□□□□ -1.69
MUC1-209ENST00000368396 LINC00304Q8N9R0 145 aa4.52□□□□□ -1.69
MUC1-209ENST00000368396 H0Y9P7 68 aa4.51□□□□□ -1.69
MUC1-209ENST00000368396 ATP5EP56381 51 aaPredicted RBP4.51□□□□□ -1.69
MUC1-209ENST00000368396 RPS28P62857 69 aaKnown RBP4.5□□□□□ -1.69
MUC1-209ENST00000368396 TRAV22A0A0B4J277 110 aa4.49□□□□□ -1.69
MUC1-209ENST00000368396 LINC00313P59037 77 aa4.49□□□□□ -1.69
MUC1-209ENST00000368396 LINC00208Q96KT6 92 aa4.49□□□□□ -1.69
MUC1-209ENST00000368396 TNXBP22105 4242 aa4.48□□□□□ -1.69
MUC1-209ENST00000368396 FAT3Q8TDW7 4589 aa4.47□□□□□ -1.69
MUC1-209ENST00000368396 NDUFS5O43920 106 aa4.47□□□□□ -1.69
MUC1-209ENST00000368396 KRTAP16-1A8MUX0 517 aa4.46□□□□□ -1.7
MUC1-209ENST00000368396 Q5VSD8 79 aa4.46□□□□□ -1.7
MUC1-209ENST00000368396 Q8N9P0 234 aaPredicted RBP4.46□□□□□ -1.7
MUC1-209ENST00000368396 C1orf64Q8NEQ6 169 aa4.46□□□□□ -1.7
MUC1-209ENST00000368396 SERP1Q9Y6X1 66 aa4.46□□□□□ -1.7
MUC1-209ENST00000368396 KRTAP13-3Q3SY46 172 aa4.45□□□□□ -1.7
MUC1-209ENST00000368396 OXTP01178 125 aa4.44□□□□□ -1.7
MUC1-209ENST00000368396 Q5W150 140 aa4.43□□□□□ -1.7
MUC1-209ENST00000368396 CYP4F30PQ9H0H9 118 aa4.43□□□□□ -1.7
MUC1-209ENST00000368396 LRP1Q07954 4544 aaKnown RBP4.42□□□□□ -1.7
MUC1-209ENST00000368396 KRTAP10-8P60410 259 aa4.42□□□□□ -1.7
MUC1-209ENST00000368396 SPANXA2-OT1Q8N9U9 137 aa4.42□□□□□ -1.7
MUC1-209ENST00000368396 EPPK1P58107 5090 aaKnown RBP4.41□□□□□ -1.7
MUC1-209ENST00000368396 LOC101927531A0A1B0GV80 90 aa4.41□□□□□ -1.7
MUC1-209ENST00000368396 KRTAP17-1Q9BYP8 105 aa4.41□□□□□ -1.7
MUC1-209ENST00000368396 KIAA1109Q2LD37 5005 aa4.41□□□□□ -1.7
MUC1-209ENST00000368396 IGLV7-46A0A075B6I9 117 aa4.38□□□□□ -1.71
MUC1-209ENST00000368396 Q8N1X5 172 aa4.38□□□□□ -1.71
MUC1-209ENST00000368396 PCOTHQ58A44 107 aa4.37□□□□□ -1.71
MUC1-209ENST00000368396 PRR4Q16378 134 aa4.36□□□□□ -1.71
MUC1-209ENST00000368396 FLG2Q5D862 2391 aaPredicted RBP4.36□□□□□ -1.71
MUC1-209ENST00000368396 SMIM26A0A096LP01 95 aa4.35□□□□□ -1.71
MUC1-209ENST00000368396 IGKV2-30P06310 120 aa4.35□□□□□ -1.71
MUC1-209ENST00000368396 KRTAP4-8Q9BYQ9 185 aa4.35□□□□□ -1.71
MUC1-209ENST00000368396 A8MUU9 505 aa4.34□□□□□ -1.71
MUC1-209ENST00000368396 C20orf166-AS1Q96NR2 134 aa4.34□□□□□ -1.71
MUC1-209ENST00000368396 RETNLBQ9BQ08 111 aa4.34□□□□□ -1.71
MUC1-209ENST00000368396 MT1HL1P0DM35 61 aa4.33□□□□□ -1.72
MUC1-209ENST00000368396 C9orf92A6NGG3 77 aa4.32□□□□□ -1.72
MUC1-209ENST00000368396 FP248Q71RG6 208 aaPredicted RBP4.32□□□□□ -1.72
MUC1-209ENST00000368396 MYCBP2O75592 4640 aa4.3□□□□□ -1.72
MUC1-209ENST00000368396 HRES1P13985 223 aa4.3□□□□□ -1.72
MUC1-209ENST00000368396 Q75L30 129 aa4.29□□□□□ -1.72
MUC1-209ENST00000368396 COA5Q86WW8 74 aa4.29□□□□□ -1.72
MUC1-209ENST00000368396 KRTAP9-2Q9BYQ4 174 aa4.29□□□□□ -1.72
MUC1-209ENST00000368396 IGKV2D-30A0A075B6S6 120 aa4.28□□□□□ -1.72
MUC1-209ENST00000368396 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.28□□□□□ -1.72
MUC1-209ENST00000368396 KRTAP19-1Q8IUB9 90 aa4.28□□□□□ -1.72
MUC1-209ENST00000368396 KRTAP9-6A0A140TA67 174 aa4.27□□□□□ -1.73
MUC1-209ENST00000368396 C7orf65Q6ZTY9 151 aa4.27□□□□□ -1.73
MUC1-209ENST00000368396 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
MUC1-209ENST00000368396 BIRC6Q9NR09 4857 aa4.26□□□□□ -1.73
MUC1-209ENST00000368396 C4orf26Q17RF5 130 aa4.26□□□□□ -1.73
MUC1-209ENST00000368396 DMAC1Q96GE9 116 aa4.26□□□□□ -1.73
MUC1-209ENST00000368396 HERC2O95714 4834 aa4.25□□□□□ -1.73
MUC1-209ENST00000368396 Q1T7F1 81 aa4.25□□□□□ -1.73
MUC1-209ENST00000368396 ACYP2P14621 99 aa4.24□□□□□ -1.73
MUC1-209ENST00000368396 MPLKIPQ8TAP9 179 aa4.24□□□□□ -1.73
MUC1-209ENST00000368396 KRTAP4-5Q9BYR2 181 aa4.24□□□□□ -1.73
MUC1-209ENST00000368396 DMBT1Q9UGM3 2413 aaPredicted RBP4.24□□□□□ -1.73
MUC1-209ENST00000368396 RPL37P61927 97 aaKnown RBP4.22□□□□□ -1.73
MUC1-209ENST00000368396 V9GYY9 64 aa4.22□□□□□ -1.73
MUC1-209ENST00000368396 ABCA13Q86UQ4 5058 aa4.21□□□□□ -1.74
MUC1-209ENST00000368396 SPINK7P58062 85 aa4.2□□□□□ -1.74
MUC1-209ENST00000368396 A8MUN3 132 aa4.19□□□□□ -1.74
MUC1-209ENST00000368396 ATP11AUNQ6ZP68 121 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 244.8 ms