RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 CD164Q04900 197 aa5.04□□□□□ -1.6
PTPRK-206ENST00000368215 Q8N9P0 234 aaPredicted RBP5.04□□□□□ -1.6
PTPRK-206ENST00000368215 TGP01266 2768 aa5.04□□□□□ -1.6
PTPRK-206ENST00000368215 LINC00483Q53H64 154 aa5.03□□□□□ -1.6
PTPRK-206ENST00000368215 A0A087X002 238 aa5.02□□□□□ -1.61
PTPRK-206ENST00000368215 Q1T7F1 81 aa5.02□□□□□ -1.61
PTPRK-206ENST00000368215 NOTCH2NLQ7Z3S9 236 aa5.02□□□□□ -1.61
PTPRK-206ENST00000368215 Q8N1X5 172 aa5.01□□□□□ -1.61
PTPRK-206ENST00000368215 K7ERS5 55 aa5□□□□□ -1.61
PTPRK-206ENST00000368215 HRES1P13985 223 aa5□□□□□ -1.61
PTPRK-206ENST00000368215 ZCCHC13Q8WW36 166 aaKnown RBP5□□□□□ -1.61
PTPRK-206ENST00000368215 KRTAP13-1Q8IUC0 172 aa5□□□□□ -1.61
PTPRK-206ENST00000368215 ATP11AUNQ6ZP68 121 aa4.99□□□□□ -1.61
PTPRK-206ENST00000368215 DMBT1Q9UGM3 2413 aaPredicted RBP4.98□□□□□ -1.61
PTPRK-206ENST00000368215 Q5W150 140 aa4.96□□□□□ -1.62
PTPRK-206ENST00000368215 AKAP9Q99996 3911 aa4.96□□□□□ -1.62
PTPRK-206ENST00000368215 LCE6AA0A183 80 aa4.93□□□□□ -1.62
PTPRK-206ENST00000368215 Q5VV11 94 aa4.93□□□□□ -1.62
PTPRK-206ENST00000368215 UQCR11O14957 56 aa4.93□□□□□ -1.62
PTPRK-206ENST00000368215 MIR22HGQ0VDD5 57 aa4.9□□□□□ -1.62
PTPRK-206ENST00000368215 SRRM2Q9UQ35 2752 aaKnown RBP4.9□□□□□ -1.63
PTPRK-206ENST00000368215 KRTAP13-2Q52LG2 175 aa4.89□□□□□ -1.63
PTPRK-206ENST00000368215 CDC42SE1Q9NRR8 79 aa4.89□□□□□ -1.63
PTPRK-206ENST00000368215 LINC01558Q9Y6Z2 57 aa4.89□□□□□ -1.63
PTPRK-206ENST00000368215 Q75L30 129 aa4.89□□□□□ -1.63
PTPRK-206ENST00000368215 FLG2Q5D862 2391 aaPredicted RBP4.89□□□□□ -1.63
PTPRK-206ENST00000368215 SPINK7P58062 85 aa4.87□□□□□ -1.63
PTPRK-206ENST00000368215 FBN3Q75N90 2809 aa4.83□□□□□ -1.64
PTPRK-206ENST00000368215 KTN1-AS1Q86SY8 53 aa4.82□□□□□ -1.64
PTPRK-206ENST00000368215 DMAC1Q96GE9 116 aa4.82□□□□□ -1.64
PTPRK-206ENST00000368215 ASB16-AS1Q495Z4 193 aa4.8□□□□□ -1.64
PTPRK-206ENST00000368215 A8MU10 97 aa4.8□□□□□ -1.64
PTPRK-206ENST00000368215 CSMD3Q7Z407 3707 aa4.8□□□□□ -1.64
PTPRK-206ENST00000368215 Q5VSD8 79 aa4.78□□□□□ -1.64
PTPRK-206ENST00000368215 LCA10Q71F78 164 aa4.78□□□□□ -1.64
PTPRK-206ENST00000368215 A0A0D9SG42 100 aa4.77□□□□□ -1.65
PTPRK-206ENST00000368215 J3QL48 77 aa4.77□□□□□ -1.65
PTPRK-206ENST00000368215 Q6ZSA8 131 aa4.76□□□□□ -1.65
PTPRK-206ENST00000368215 MEGF8Q7Z7M0 2845 aa4.75□□□□□ -1.65
PTPRK-206ENST00000368215 HUWE1Q7Z6Z7 4374 aaKnown RBP4.75□□□□□ -1.65
PTPRK-206ENST00000368215 KRTAP1-4P0C5Y4 121 aa4.75□□□□□ -1.65
PTPRK-206ENST00000368215 A0A1B0GU33 70 aa4.74□□□□□ -1.65
PTPRK-206ENST00000368215 PRAC1Q96KF2 57 aa4.73□□□□□ -1.65
PTPRK-206ENST00000368215 COL7A1Q02388 2944 aa4.73□□□□□ -1.65
PTPRK-206ENST00000368215 RBM12B-AS1Q9P1G2 102 aa4.69□□□□□ -1.66
PTPRK-206ENST00000368215 LINC01554Q52M75 96 aa4.67□□□□□ -1.66
PTPRK-206ENST00000368215 SPINT4Q6UDR6 99 aa4.66□□□□□ -1.66
PTPRK-206ENST00000368215 COX6B2Q6YFQ2 88 aa4.66□□□□□ -1.66
PTPRK-206ENST00000368215 RPS29P62273 56 aaKnown RBP4.66□□□□□ -1.66
PTPRK-206ENST00000368215 KRTAP21-3Q3LHN1 58 aa4.64□□□□□ -1.67
PTPRK-206ENST00000368215 S4R3F8 94 aa4.64□□□□□ -1.67
PTPRK-206ENST00000368215 SPATA8Q6RVD6 105 aa4.63□□□□□ -1.67
PTPRK-206ENST00000368215 KRTAP16-1A8MUX0 517 aa4.62□□□□□ -1.67
PTPRK-206ENST00000368215 CRIPTQ9P021 101 aa4.61□□□□□ -1.67
PTPRK-206ENST00000368215 DNAH9Q9NYC9 4486 aa4.6□□□□□ -1.67
PTPRK-206ENST00000368215 H1FX-AS1Q4G0G2 97 aa4.6□□□□□ -1.67
PTPRK-206ENST00000368215 CSAG1Q6PB30 78 aa4.6□□□□□ -1.67
PTPRK-206ENST00000368215 A6NN06 94 aa4.6□□□□□ -1.67
PTPRK-206ENST00000368215 A8MUU9 505 aa4.59□□□□□ -1.67
PTPRK-206ENST00000368215 DNAH10Q8IVF4 4471 aa4.59□□□□□ -1.68
PTPRK-206ENST00000368215 KRTAP13-3Q3SY46 172 aa4.58□□□□□ -1.68
PTPRK-206ENST00000368215 C20orf166-AS1Q96NR2 134 aa4.58□□□□□ -1.68
PTPRK-206ENST00000368215 PLECQ15149 4684 aaKnown RBP4.57□□□□□ -1.68
PTPRK-206ENST00000368215 ADM2Q7Z4H4 148 aa4.56□□□□□ -1.68
PTPRK-206ENST00000368215 RPL37P61927 97 aaKnown RBP4.53□□□□□ -1.68
PTPRK-206ENST00000368215 ANK2Q01484 3957 aa4.5□□□□□ -1.69
PTPRK-206ENST00000368215 A0A1B0GVY2 172 aa4.49□□□□□ -1.69
PTPRK-206ENST00000368215 SEC61BP60468 96 aaKnown RBP4.49□□□□□ -1.69
PTPRK-206ENST00000368215 DNAH1Q9P2D7 4330 aa4.48□□□□□ -1.69
PTPRK-206ENST00000368215 R4GN34 69 aa4.48□□□□□ -1.69
PTPRK-206ENST00000368215 H3BS24 57 aa4.47□□□□□ -1.69
PTPRK-206ENST00000368215 XP32Q5T750 250 aa4.47□□□□□ -1.69
PTPRK-206ENST00000368215 DNHD1Q96M86 4753 aa4.45□□□□□ -1.7
PTPRK-206ENST00000368215 M0QZ58 72 aa4.45□□□□□ -1.7
PTPRK-206ENST00000368215 DNAH11Q96DT5 4516 aa4.44□□□□□ -1.7
PTPRK-206ENST00000368215 STARD9Q9P2P6 4700 aa4.44□□□□□ -1.7
PTPRK-206ENST00000368215 ROMO1P60602 79 aa4.44□□□□□ -1.7
PTPRK-206ENST00000368215 CAMK2N1Q7Z7J9 78 aa4.43□□□□□ -1.7
PTPRK-206ENST00000368215 H0YAA0 97 aa4.42□□□□□ -1.7
PTPRK-206ENST00000368215 PRKDCP78527 4128 aaKnown RBP4.4□□□□□ -1.71
PTPRK-206ENST00000368215 VPS13DQ5THJ4 4388 aa4.4□□□□□ -1.71
PTPRK-206ENST00000368215 KRTAP10-8P60410 259 aa4.39□□□□□ -1.71
PTPRK-206ENST00000368215 M0R2T5 61 aa4.39□□□□□ -1.71
PTPRK-206ENST00000368215 CMYA5Q8N3K9 4069 aa4.38□□□□□ -1.71
PTPRK-206ENST00000368215 LYSTQ99698 3801 aa4.37□□□□□ -1.71
PTPRK-206ENST00000368215 DNAH5Q8TE73 4624 aa4.36□□□□□ -1.71
PTPRK-206ENST00000368215 KRTAP25-1Q3LHN0 102 aa4.35□□□□□ -1.71
PTPRK-206ENST00000368215 KRTAP3-1Q9BYR8 98 aa4.35□□□□□ -1.71
PTPRK-206ENST00000368215 DNAH3Q8TD57 4116 aa4.35□□□□□ -1.71
PTPRK-206ENST00000368215 DNAH17Q9UFH2 4485 aa4.35□□□□□ -1.71
PTPRK-206ENST00000368215 KMT2AQ03164 3969 aa4.35□□□□□ -1.71
PTPRK-206ENST00000368215 P0C880 135 aa4.32□□□□□ -1.72
PTPRK-206ENST00000368215 DNAH8Q96JB1 4490 aa4.3□□□□□ -1.72
PTPRK-206ENST00000368215 TPRXLQ17RH7 258 aa4.3□□□□□ -1.72
PTPRK-206ENST00000368215 DNAH2Q9P225 4427 aa4.29□□□□□ -1.72
PTPRK-206ENST00000368215 LRP1BQ9NZR2 4599 aa4.29□□□□□ -1.72
PTPRK-206ENST00000368215 KRTAP10-4P60372 401 aaPredicted RBP4.28□□□□□ -1.72
PTPRK-206ENST00000368215 FAT1Q14517 4588 aa4.28□□□□□ -1.72
PTPRK-206ENST00000368215 DNAH7Q8WXX0 4024 aa4.27□□□□□ -1.73
PTPRK-206ENST00000368215 C10orf95Q9H7T3 257 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms