RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 OBSCN-AS1Q96MR7 158 aa5.27□□□□□ -1.57
CD48-202ENST00000368046 Q96NJ1 140 aa5.27□□□□□ -1.57
CD48-202ENST00000368046 CCKP06307 115 aa5.26□□□□□ -1.57
CD48-202ENST00000368046 ATXN8Q156A1 80 aa5.26□□□□□ -1.57
CD48-202ENST00000368046 KRTAP23-1A1A580 65 aa5.25□□□□□ -1.57
CD48-202ENST00000368046 DSCR8Q96T75 97 aa5.25□□□□□ -1.57
CD48-202ENST00000368046 NAA38Q9BRA0 125 aaKnown RBP5.25□□□□□ -1.57
CD48-202ENST00000368046 C9JAW5 83 aa5.23□□□□□ -1.57
CD48-202ENST00000368046 BATFQ16520 125 aa5.23□□□□□ -1.57
CD48-202ENST00000368046 ATP11AUNQ6ZP68 121 aa5.23□□□□□ -1.57
CD48-202ENST00000368046 Q75L30 129 aa5.23□□□□□ -1.57
CD48-202ENST00000368046 LINC00472Q9H8W2 130 aa5.23□□□□□ -1.57
CD48-202ENST00000368046 TRBV20-1A0A075B6N2 111 aa5.22□□□□□ -1.57
CD48-202ENST00000368046 JMJD7-PLA2G4BH0Y9G9 81 aa5.22□□□□□ -1.57
CD48-202ENST00000368046 IGKV4-1P06312 121 aa5.22□□□□□ -1.57
CD48-202ENST00000368046 LYRM7Q5U5X0 104 aa5.22□□□□□ -1.57
CD48-202ENST00000368046 VPS25Q9BRG1 176 aa5.22□□□□□ -1.57
CD48-202ENST00000368046 LINC00313P59037 77 aa5.2□□□□□ -1.58
CD48-202ENST00000368046 DEFB116Q30KQ4 102 aa5.2□□□□□ -1.58
CD48-202ENST00000368046 A0A1B0GW54 56 aa5.19□□□□□ -1.58
CD48-202ENST00000368046 A8MUU9 505 aa5.19□□□□□ -1.58
CD48-202ENST00000368046 DSCR10P59022 87 aa5.19□□□□□ -1.58
CD48-202ENST00000368046 C20orf166-AS1Q96NR2 134 aa5.19□□□□□ -1.58
CD48-202ENST00000368046 SIGMAR1Q99720 223 aa5.19□□□□□ -1.58
CD48-202ENST00000368046 PDE6GP18545 87 aa5.18□□□□□ -1.58
CD48-202ENST00000368046 KRTAP19-2Q3LHN2 52 aa5.18□□□□□ -1.58
CD48-202ENST00000368046 Q6ZQT0 140 aa5.18□□□□□ -1.58
CD48-202ENST00000368046 LOC110117498A0A087WWA1 95 aa5.17□□□□□ -1.58
CD48-202ENST00000368046 TAX1BP3O14907 124 aa5.17□□□□□ -1.58
CD48-202ENST00000368046 A0A1W2PPM0 123 aa5.16□□□□□ -1.58
CD48-202ENST00000368046 J3KT08 172 aa5.15□□□□□ -1.59
CD48-202ENST00000368046 IGHV6-1A0A0B4J1U7 121 aa5.14□□□□□ -1.59
CD48-202ENST00000368046 NOTCH2NLQ7Z3S9 236 aa5.14□□□□□ -1.59
CD48-202ENST00000368046 C14orf132Q9NPU4 83 aa5.14□□□□□ -1.59
CD48-202ENST00000368046 KRTAP16-1A8MUX0 517 aa5.13□□□□□ -1.59
CD48-202ENST00000368046 H3BT86 120 aa5.13□□□□□ -1.59
CD48-202ENST00000368046 A0A1B0GVX0 72 aa5.12□□□□□ -1.59
CD48-202ENST00000368046 C8orf87E5RJ46 101 aa5.12□□□□□ -1.59
CD48-202ENST00000368046 NDUFB1O75438 58 aa5.11□□□□□ -1.59
CD48-202ENST00000368046 MT1HP80294 61 aa5.11□□□□□ -1.59
CD48-202ENST00000368046 COX6B2Q6YFQ2 88 aa5.11□□□□□ -1.59
CD48-202ENST00000368046 NREPQ16612 68 aa5.1□□□□□ -1.59
CD48-202ENST00000368046 COL5A1-AS1Q5SY13 56 aa5.09□□□□□ -1.59
CD48-202ENST00000368046 SPCS1Q9Y6A9 102 aa5.08□□□□□ -1.6
CD48-202ENST00000368046 A8MWP4 228 aa5.07□□□□□ -1.6
CD48-202ENST00000368046 MTURNQ8N3F0 131 aa5.07□□□□□ -1.6
CD48-202ENST00000368046 IGKV3D-7A0A0C4DH55 119 aa5.05□□□□□ -1.6
CD48-202ENST00000368046 M0R2T5 61 aa5.05□□□□□ -1.6
CD48-202ENST00000368046 C8orf17Q9NRJ1 99 aa5.05□□□□□ -1.6
CD48-202ENST00000368046 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.04□□□□□ -1.6
CD48-202ENST00000368046 Q8N9P0 234 aaPredicted RBP5.04□□□□□ -1.6
CD48-202ENST00000368046 PRR15Q8IV56 129 aa5.03□□□□□ -1.6
CD48-202ENST00000368046 K7EP34 96 aa5.01□□□□□ -1.61
CD48-202ENST00000368046 KRTAP10-6P60371 365 aaPredicted RBP5.01□□□□□ -1.61
CD48-202ENST00000368046 Q6ZVQ6 151 aa5.01□□□□□ -1.61
CD48-202ENST00000368046 ZCCHC13Q8WW36 166 aaKnown RBP5.01□□□□□ -1.61
CD48-202ENST00000368046 PCP4L1A6NKN8 68 aa5□□□□□ -1.61
CD48-202ENST00000368046 PRO0461Q9UI25 63 aa5□□□□□ -1.61
CD48-202ENST00000368046 BPY2O14599 106 aa4.99□□□□□ -1.61
CD48-202ENST00000368046 HRES1P13985 223 aa4.98□□□□□ -1.61
CD48-202ENST00000368046 KRTAP15-1Q3LI76 137 aa4.98□□□□□ -1.61
CD48-202ENST00000368046 GTF2H5Q6ZYL4 71 aa4.98□□□□□ -1.61
CD48-202ENST00000368046 MPLKIPQ8TAP9 179 aa4.98□□□□□ -1.61
CD48-202ENST00000368046 MRPL34Q9BQ48 92 aaKnown RBP4.98□□□□□ -1.61
CD48-202ENST00000368046 RBM12B-AS1Q9P1G2 102 aa4.98□□□□□ -1.61
CD48-202ENST00000368046 MMP24-AS1A0A0U1RRL7 71 aa4.97□□□□□ -1.61
CD48-202ENST00000368046 K7EQZ3 153 aa4.97□□□□□ -1.61
CD48-202ENST00000368046 SPINK7P58062 85 aa4.97□□□□□ -1.61
CD48-202ENST00000368046 TMEM254Q8TBM7 123 aa4.97□□□□□ -1.61
CD48-202ENST00000368046 hDV103S1A0JD37 113 aa4.96□□□□□ -1.62
CD48-202ENST00000368046 F8W1H4 67 aa4.96□□□□□ -1.62
CD48-202ENST00000368046 FAM236DA0A1B0GTK5 79 aa4.95□□□□□ -1.62
CD48-202ENST00000368046 FAM236CP0DP71 79 aa4.95□□□□□ -1.62
CD48-202ENST00000368046 FLGP20930 4061 aaPredicted RBP4.95□□□□□ -1.62
CD48-202ENST00000368046 UBL5Q9BZL1 73 aa4.94□□□□□ -1.62
CD48-202ENST00000368046 LINC00846Q9NV44 126 aa4.94□□□□□ -1.62
CD48-202ENST00000368046 NDUFS5O43920 106 aa4.91□□□□□ -1.62
CD48-202ENST00000368046 Q8N9L7 120 aa4.91□□□□□ -1.62
CD48-202ENST00000368046 ETDBQ3ZM63 59 aa4.9□□□□□ -1.63
CD48-202ENST00000368046 CASC2Q6XLA1 102 aa4.9□□□□□ -1.63
CD48-202ENST00000368046 WFDC13Q8IUB5 93 aa4.89□□□□□ -1.63
CD48-202ENST00000368046 FSIP2Q5CZC0 6907 aa4.88□□□□□ -1.63
CD48-202ENST00000368046 Q5W150 140 aa4.87□□□□□ -1.63
CD48-202ENST00000368046 HCG22E2RYF7 251 aa4.86□□□□□ -1.63
CD48-202ENST00000368046 CXCL6P80162 114 aa4.84□□□□□ -1.63
CD48-202ENST00000368046 KRTAP5-11Q6L8G4 156 aa4.83□□□□□ -1.64
CD48-202ENST00000368046 CRCT1Q9UGL9 99 aa4.83□□□□□ -1.64
CD48-202ENST00000368046 IGKV2D-30A0A075B6S6 120 aa4.82□□□□□ -1.64
CD48-202ENST00000368046 IGKV2-30P06310 120 aa4.82□□□□□ -1.64
CD48-202ENST00000368046 ACYP1P07311 99 aa4.82□□□□□ -1.64
CD48-202ENST00000368046 C7orf65Q6ZTY9 151 aa4.81□□□□□ -1.64
CD48-202ENST00000368046 KRTAP10-7P60409 375 aaPredicted RBP4.8□□□□□ -1.64
CD48-202ENST00000368046 MT2AP02795 61 aa4.79□□□□□ -1.64
CD48-202ENST00000368046 H1FX-AS1Q4G0G2 97 aa4.79□□□□□ -1.64
CD48-202ENST00000368046 TP53AIP1Q9HCN2 124 aa4.78□□□□□ -1.64
CD48-202ENST00000368046 FAM240AA0A1B0GVK7 77 aa4.76□□□□□ -1.65
CD48-202ENST00000368046 KRTAP10-10P60014 251 aa4.75□□□□□ -1.65
CD48-202ENST00000368046 MT1FP04733 61 aa4.74□□□□□ -1.65
CD48-202ENST00000368046 C4orf26Q17RF5 130 aa4.74□□□□□ -1.65
CD48-202ENST00000368046 A0A1B0GV90 55 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms