RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 ADIRFQ15847 76 aa-0.6□□□□□ -2.51
RPL39-201ENST00000361575 ABCC1P33527 1531 aa-0.6□□□□□ -2.51
RPL39-201ENST00000361575 CCDC168Q8NDH2 2452 aa-0.6□□□□□ -2.51
RPL39-201ENST00000361575 CCDC18Q5T9S5 1454 aa-0.61□□□□□ -2.51
RPL39-201ENST00000361575 RELNP78509 3460 aa-0.61□□□□□ -2.51
RPL39-201ENST00000361575 MTORP42345 2549 aa-0.61□□□□□ -2.51
RPL39-201ENST00000361575 CDC42BPAQ5VT25 1732 aa-0.61□□□□□ -2.51
RPL39-201ENST00000361575 INO80Q9ULG1 1556 aaPredicted RBP-0.61□□□□□ -2.51
RPL39-201ENST00000361575 RANBP2P49792 3224 aaKnown RBP-0.61□□□□□ -2.51
RPL39-201ENST00000361575 USP9YO00507 2555 aaPredicted RBP-0.61□□□□□ -2.51
RPL39-201ENST00000361575 BVES-AS1Q5T3Y7 98 aa-0.61□□□□□ -2.51
RPL39-201ENST00000361575 RALGAPBQ86X10 1494 aa-0.61□□□□□ -2.51
RPL39-201ENST00000361575 ITPR3Q14573 2671 aa-0.61□□□□□ -2.51
RPL39-201ENST00000361575 ACACBO00763 2458 aa-0.62□□□□□ -2.51
RPL39-201ENST00000361575 PKD1L2Q7Z442 2459 aa-0.62□□□□□ -2.51
RPL39-201ENST00000361575 BPTFQ12830 3046 aa-0.62□□□□□ -2.51
RPL39-201ENST00000361575 LAMA3Q16787 3333 aa-0.63□□□□□ -2.51
RPL39-201ENST00000361575 CMYA5Q8N3K9 4069 aa-0.63□□□□□ -2.51
RPL39-201ENST00000361575 LRRK2Q5S007 2527 aa-0.63□□□□□ -2.51
RPL39-201ENST00000361575 NBEAQ8NFP9 2946 aa-0.63□□□□□ -2.51
RPL39-201ENST00000361575 FAM186AA6NE01 2351 aa-0.63□□□□□ -2.51
RPL39-201ENST00000361575 DNAH2Q9P225 4427 aa-0.63□□□□□ -2.51
RPL39-201ENST00000361575 DEFB131BA0A096LNP1 70 aa-0.63□□□□□ -2.51
RPL39-201ENST00000361575 H3BVH4 76 aa-0.63□□□□□ -2.51
RPL39-201ENST00000361575 UBL5Q9BZL1 73 aa-0.63□□□□□ -2.51
RPL39-201ENST00000361575 RYR1P21817 5038 aa-0.63□□□□□ -2.51
RPL39-201ENST00000361575 ABCA9Q8IUA7 1624 aa-0.64□□□□□ -2.51
RPL39-201ENST00000361575 SPTBN5Q9NRC6 3674 aaKnown RBP-0.64□□□□□ -2.51
RPL39-201ENST00000361575 UTP20O75691 2785 aaKnown RBP-0.64□□□□□ -2.51
RPL39-201ENST00000361575 DIP2AQ14689 1571 aa-0.64□□□□□ -2.51
RPL39-201ENST00000361575 CD163L1Q9NR16 1453 aa-0.64□□□□□ -2.51
RPL39-201ENST00000361575 DNAH7Q8WXX0 4024 aa-0.64□□□□□ -2.51
RPL39-201ENST00000361575 CRIP1P50238 77 aa-0.64□□□□□ -2.51
RPL39-201ENST00000361575 NCBP2-AS2Q69YL0 99 aa-0.64□□□□□ -2.51
RPL39-201ENST00000361575 ENHOQ6UWT2 76 aa-0.64□□□□□ -2.51
RPL39-201ENST00000361575 NBEAL2Q6ZNJ1 2754 aa-0.64□□□□□ -2.51
RPL39-201ENST00000361575 MADDQ8WXG6 1647 aa-0.64□□□□□ -2.51
RPL39-201ENST00000361575 CDC42BPGQ6DT37 1551 aa-0.65□□□□□ -2.51
RPL39-201ENST00000361575 MRPL33O75394 65 aaKnown RBP-0.65□□□□□ -2.51
RPL39-201ENST00000361575 SFTA3P0C7M3 94 aa-0.65□□□□□ -2.51
RPL39-201ENST00000361575 DEFB1P60022 68 aa-0.65□□□□□ -2.51
RPL39-201ENST00000361575 MINOS1Q5TGZ0 78 aa-0.65□□□□□ -2.51
RPL39-201ENST00000361575 C18orf32Q8TCD1 76 aa-0.65□□□□□ -2.51
RPL39-201ENST00000361575 KCNQ1DNQ9H478 68 aa-0.65□□□□□ -2.51
RPL39-201ENST00000361575 EPPK1P58107 5090 aaKnown RBP-0.65□□□□□ -2.51
RPL39-201ENST00000361575 DOPEY1Q5JWR5 2465 aa-0.65□□□□□ -2.51
RPL39-201ENST00000361575 CROCC2H7BZ55 1655 aa-0.65□□□□□ -2.51
RPL39-201ENST00000361575 RPS27P42677 84 aaKnown RBP-0.66□□□□□ -2.52
RPL39-201ENST00000361575 WT1-ASQ06250 92 aa-0.66□□□□□ -2.52
RPL39-201ENST00000361575 RPS27LQ71UM5 84 aaKnown RBP-0.66□□□□□ -2.52
RPL39-201ENST00000361575 WDR87Q6ZQQ6 2873 aa-0.66□□□□□ -2.52
RPL39-201ENST00000361575 RYR3Q15413 4870 aa-0.66□□□□□ -2.52
RPL39-201ENST00000361575 MGAM2Q2M2H8 2515 aa-0.67□□□□□ -2.52
RPL39-201ENST00000361575 DNHD1Q96M86 4753 aa-0.67□□□□□ -2.52
RPL39-201ENST00000361575 FCER1GP30273 86 aa-0.67□□□□□ -2.52
RPL39-201ENST00000361575 KRTAP19-5Q3LI72 72 aa-0.67□□□□□ -2.52
RPL39-201ENST00000361575 PLECQ15149 4684 aaKnown RBP-0.67□□□□□ -2.52
RPL39-201ENST00000361575 ASXL1Q8IXJ9 1541 aa-0.68□□□□□ -2.52
RPL39-201ENST00000361575 RRBP1Q9P2E9 1410 aaKnown RBP-0.68□□□□□ -2.52
RPL39-201ENST00000361575 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.68□□□□□ -2.52
RPL39-201ENST00000361575 DNAH8Q96JB1 4490 aa-0.68□□□□□ -2.52
RPL39-201ENST00000361575 FAM208AQ9UK61 1670 aaKnown RBP-0.69□□□□□ -2.52
RPL39-201ENST00000361575 ETDCA0A1B0GVM5 59 aa-0.69□□□□□ -2.52
RPL39-201ENST00000361575 ABCC6O95255 1503 aa-0.69□□□□□ -2.52
RPL39-201ENST00000361575 BIRC6Q9NR09 4857 aa-0.7□□□□□ -2.52
RPL39-201ENST00000361575 NIPBLQ6KC79 2804 aaeCLIP-0.7□□□□□ -2.526e-29■■■■■ 94.3
RPL39-201ENST00000361575 SRCAPQ6ZRS2 3230 aa-0.7□□□□□ -2.52
RPL39-201ENST00000361575 MT1HP80294 61 aa-0.7□□□□□ -2.52
RPL39-201ENST00000361575 C6orf48Q9UBA6 75 aa-0.7□□□□□ -2.52
RPL39-201ENST00000361575 HILPDAQ9Y5L2 63 aa-0.7□□□□□ -2.52
RPL39-201ENST00000361575 LAMA2P24043 3122 aaKnown RBP-0.7□□□□□ -2.52
RPL39-201ENST00000361575 UGGT2Q9NYU1 1516 aa-0.7□□□□□ -2.52
RPL39-201ENST00000361575 ANKARQ7Z5J8 1434 aa-0.71□□□□□ -2.52
RPL39-201ENST00000361575 ALS2Q96Q42 1657 aa-0.71□□□□□ -2.52
RPL39-201ENST00000361575 IGLV5-48A0A075B6I7 105 aa-0.71□□□□□ -2.52
RPL39-201ENST00000361575 RNF213Q63HN8 5207 aa-0.71□□□□□ -2.52
RPL39-201ENST00000361575 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.71□□□□□ -2.52
RPL39-201ENST00000361575 DNMBPQ6XZF7 1577 aa-0.71□□□□□ -2.52
RPL39-201ENST00000361575 MMP24-AS1A0A0U1RRL7 71 aa-0.72□□□□□ -2.52
RPL39-201ENST00000361575 TNP1P09430 55 aa-0.72□□□□□ -2.52
RPL39-201ENST00000361575 CLPSL2Q6UWE3 100 aa-0.72□□□□□ -2.52
RPL39-201ENST00000361575 HYDINQ4G0P3 5121 aa-0.72□□□□□ -2.52
RPL39-201ENST00000361575 TLN2Q9Y4G6 2542 aa-0.72□□□□□ -2.53
RPL39-201ENST00000361575 CELSR3Q9NYQ7 3312 aa-0.73□□□□□ -2.53
RPL39-201ENST00000361575 MAST1Q9Y2H9 1570 aa-0.73□□□□□ -2.53
RPL39-201ENST00000361575 DYNC1H1Q14204 4646 aaKnown RBP-0.74□□□□□ -2.53
RPL39-201ENST00000361575 COL12A1Q99715 3063 aa-0.74□□□□□ -2.53
RPL39-201ENST00000361575 SMR3BP02814 79 aaPredicted RBP-0.74□□□□□ -2.53
RPL39-201ENST00000361575 GNG13Q9P2W3 67 aa-0.74□□□□□ -2.53
RPL39-201ENST00000361575 CCDC180Q9P1Z9 1646 aa-0.75□□□□□ -2.53
RPL39-201ENST00000361575 ATXN8Q156A1 80 aa-0.75□□□□□ -2.53
RPL39-201ENST00000361575 C5orf42Q9H799 3197 aa-0.75□□□□□ -2.53
RPL39-201ENST00000361575 CLASP1Q7Z460 1538 aa-0.75□□□□□ -2.53
RPL39-201ENST00000361575 TIAM1Q13009 1591 aa-0.75□□□□□ -2.53
RPL39-201ENST00000361575 DNAH17Q9UFH2 4485 aa-0.76□□□□□ -2.53
RPL39-201ENST00000361575 H3BUA1 57 aa-0.76□□□□□ -2.53
RPL39-201ENST00000361575 NOP10Q9NPE3 64 aaKnown RBP-0.76□□□□□ -2.53
RPL39-201ENST00000361575 ABCA6Q8N139 1617 aa-0.77□□□□□ -2.53
RPL39-201ENST00000361575 TEX15Q9BXT5 2789 aa-0.77□□□□□ -2.53
RPL39-201ENST00000361575 KIAA1109Q2LD37 5005 aa-0.77□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms