RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 WWC2-AS2Q96NR7 200 aa5.67□□□□□ -1.5
GTF3C2-202ENST00000359541 PCOTHQ58A44 107 aa5.67□□□□□ -1.5
GTF3C2-202ENST00000359541 FRAS1Q86XX4 4008 aa5.66□□□□□ -1.5
GTF3C2-202ENST00000359541 KRTAP29-1A8MX34 341 aaPredicted RBP5.65□□□□□ -1.5
GTF3C2-202ENST00000359541 PRKDCP78527 4128 aaKnown RBP5.65□□□□□ -1.5
GTF3C2-202ENST00000359541 ZCCHC13Q8WW36 166 aaKnown RBP5.65□□□□□ -1.5
GTF3C2-202ENST00000359541 SPINK1P00995 79 aa5.65□□□□□ -1.51
GTF3C2-202ENST00000359541 LCA10Q71F78 164 aa5.65□□□□□ -1.51
GTF3C2-202ENST00000359541 SPANXA2-OT1Q8N9U9 137 aa5.64□□□□□ -1.51
GTF3C2-202ENST00000359541 FBN3Q75N90 2809 aa5.64□□□□□ -1.51
GTF3C2-202ENST00000359541 IGLV7-43P04211 117 aa5.63□□□□□ -1.51
GTF3C2-202ENST00000359541 PLA2G1BP04054 148 aaKnown RBP5.63□□□□□ -1.51
GTF3C2-202ENST00000359541 C7orf65Q6ZTY9 151 aa5.63□□□□□ -1.51
GTF3C2-202ENST00000359541 HECTD4Q9Y4D8 3996 aa5.63□□□□□ -1.51
GTF3C2-202ENST00000359541 MEGF8Q7Z7M0 2845 aa5.62□□□□□ -1.51
GTF3C2-202ENST00000359541 MMP24-AS1A0A0U1RRL7 71 aa5.62□□□□□ -1.51
GTF3C2-202ENST00000359541 CYP4F30PQ9H0H9 118 aa5.62□□□□□ -1.51
GTF3C2-202ENST00000359541 COL7A1Q02388 2944 aa5.62□□□□□ -1.51
GTF3C2-202ENST00000359541 C8orf17Q9NRJ1 99 aa5.61□□□□□ -1.51
GTF3C2-202ENST00000359541 A0A1B0GVX0 72 aa5.61□□□□□ -1.51
GTF3C2-202ENST00000359541 SSBP3-AS1Q7Z2R9 100 aa5.59□□□□□ -1.51
GTF3C2-202ENST00000359541 IGKV2D-30A0A075B6S6 120 aa5.59□□□□□ -1.51
GTF3C2-202ENST00000359541 LOC101927531A0A1B0GV80 90 aa5.59□□□□□ -1.51
GTF3C2-202ENST00000359541 IGKV2-30P06310 120 aa5.59□□□□□ -1.51
GTF3C2-202ENST00000359541 Q1T7F1 81 aa5.58□□□□□ -1.52
GTF3C2-202ENST00000359541 VPS13DQ5THJ4 4388 aa5.57□□□□□ -1.52
GTF3C2-202ENST00000359541 LINC01554Q52M75 96 aa5.57□□□□□ -1.52
GTF3C2-202ENST00000359541 MRPL34Q9BQ48 92 aaKnown RBP5.57□□□□□ -1.52
GTF3C2-202ENST00000359541 Q96NJ1 140 aa5.57□□□□□ -1.52
GTF3C2-202ENST00000359541 ACYP2P14621 99 aa5.57□□□□□ -1.52
GTF3C2-202ENST00000359541 ATP11AUNQ6ZP68 121 aa5.57□□□□□ -1.52
GTF3C2-202ENST00000359541 Q75L30 129 aa5.57□□□□□ -1.52
GTF3C2-202ENST00000359541 ALMS1Q8TCU4 4167 aa5.56□□□□□ -1.52
GTF3C2-202ENST00000359541 DNAH8Q96JB1 4490 aa5.55□□□□□ -1.52
GTF3C2-202ENST00000359541 ADM2Q7Z4H4 148 aa5.55□□□□□ -1.52
GTF3C2-202ENST00000359541 COA5Q86WW8 74 aa5.54□□□□□ -1.52
GTF3C2-202ENST00000359541 PLECQ15149 4684 aaKnown RBP5.54□□□□□ -1.52
GTF3C2-202ENST00000359541 LINC00313P59037 77 aa5.54□□□□□ -1.52
GTF3C2-202ENST00000359541 SPAG11AQ6PDA7 123 aa5.54□□□□□ -1.52
GTF3C2-202ENST00000359541 TYMSOSQ8TAI1 123 aa5.54□□□□□ -1.52
GTF3C2-202ENST00000359541 Q5VV11 94 aa5.52□□□□□ -1.53
GTF3C2-202ENST00000359541 ASB16-AS1Q495Z4 193 aa5.52□□□□□ -1.53
GTF3C2-202ENST00000359541 KRTAP10-2P60368 255 aa5.51□□□□□ -1.53
GTF3C2-202ENST00000359541 IGLV7-46A0A075B6I9 117 aa5.49□□□□□ -1.53
GTF3C2-202ENST00000359541 DNAH2Q9P225 4427 aa5.49□□□□□ -1.53
GTF3C2-202ENST00000359541 DNAH6Q9C0G6 4158 aa5.49□□□□□ -1.53
GTF3C2-202ENST00000359541 C9orf92A6NGG3 77 aa5.47□□□□□ -1.53
GTF3C2-202ENST00000359541 Q6ZSA8 131 aa5.47□□□□□ -1.53
GTF3C2-202ENST00000359541 DNAH17Q9UFH2 4485 aa5.47□□□□□ -1.53
GTF3C2-202ENST00000359541 KRTAP10-1P60331 282 aa5.46□□□□□ -1.53
GTF3C2-202ENST00000359541 A0A1B0GU69 56 aa5.46□□□□□ -1.54
GTF3C2-202ENST00000359541 KMT2AQ03164 3969 aa5.46□□□□□ -1.54
GTF3C2-202ENST00000359541 STARD9Q9P2P6 4700 aa5.45□□□□□ -1.54
GTF3C2-202ENST00000359541 K7ERS5 55 aa5.45□□□□□ -1.54
GTF3C2-202ENST00000359541 A6NN06 94 aa5.44□□□□□ -1.54
GTF3C2-202ENST00000359541 A0A087X002 238 aa5.42□□□□□ -1.54
GTF3C2-202ENST00000359541 NOTCH2NLQ7Z3S9 236 aa5.42□□□□□ -1.54
GTF3C2-202ENST00000359541 Q8N9P0 234 aaPredicted RBP5.41□□□□□ -1.54
GTF3C2-202ENST00000359541 CDC42SE1Q9NRR8 79 aa5.4□□□□□ -1.54
GTF3C2-202ENST00000359541 KRTAP13-2Q52LG2 175 aa5.4□□□□□ -1.55
GTF3C2-202ENST00000359541 CSAG1Q6PB30 78 aa5.39□□□□□ -1.55
GTF3C2-202ENST00000359541 LINC01558Q9Y6Z2 57 aa5.39□□□□□ -1.55
GTF3C2-202ENST00000359541 SPINK7P58062 85 aa5.38□□□□□ -1.55
GTF3C2-202ENST00000359541 UQCR11O14957 56 aa5.36□□□□□ -1.55
GTF3C2-202ENST00000359541 Q5W150 140 aa5.35□□□□□ -1.55
GTF3C2-202ENST00000359541 KRTAP1-4P0C5Y4 121 aa5.35□□□□□ -1.55
GTF3C2-202ENST00000359541 LINC00304Q8N9R0 145 aa5.34□□□□□ -1.55
GTF3C2-202ENST00000359541 HRES1P13985 223 aa5.33□□□□□ -1.56
GTF3C2-202ENST00000359541 KMT2CQ8NEZ4 4911 aaKnown RBP5.33□□□□□ -1.56
GTF3C2-202ENST00000359541 SEC61BP60468 96 aaKnown RBP5.33□□□□□ -1.56
GTF3C2-202ENST00000359541 RPS29P62273 56 aaKnown RBP5.32□□□□□ -1.56
GTF3C2-202ENST00000359541 KRTAP13-3Q3SY46 172 aa5.32□□□□□ -1.56
GTF3C2-202ENST00000359541 PKD1P98161 4303 aa5.32□□□□□ -1.56
GTF3C2-202ENST00000359541 DNAH11Q96DT5 4516 aa5.3□□□□□ -1.56
GTF3C2-202ENST00000359541 MIR22HGQ0VDD5 57 aa5.29□□□□□ -1.56
GTF3C2-202ENST00000359541 DMAC1Q96GE9 116 aa5.29□□□□□ -1.56
GTF3C2-202ENST00000359541 FAT2Q9NYQ8 4349 aa5.29□□□□□ -1.56
GTF3C2-202ENST00000359541 DNAH5Q8TE73 4624 aa5.28□□□□□ -1.56
GTF3C2-202ENST00000359541 RYR3Q15413 4870 aa5.27□□□□□ -1.57
GTF3C2-202ENST00000359541 CRIPTQ9P021 101 aa5.27□□□□□ -1.57
GTF3C2-202ENST00000359541 COX6B2Q6YFQ2 88 aa5.27□□□□□ -1.57
GTF3C2-202ENST00000359541 KRTAP16-1A8MUX0 517 aa5.26□□□□□ -1.57
GTF3C2-202ENST00000359541 Q8N1X5 172 aa5.26□□□□□ -1.57
GTF3C2-202ENST00000359541 SACSQ9NZJ4 4579 aa5.26□□□□□ -1.57
GTF3C2-202ENST00000359541 HYDINQ4G0P3 5121 aa5.24□□□□□ -1.57
GTF3C2-202ENST00000359541 SPINT4Q6UDR6 99 aa5.22□□□□□ -1.57
GTF3C2-202ENST00000359541 RYR2Q92736 4967 aa5.19□□□□□ -1.58
GTF3C2-202ENST00000359541 KRTAP3-3Q9BYR6 98 aa5.18□□□□□ -1.58
GTF3C2-202ENST00000359541 KRTAP3-2Q9BYR7 98 aa5.18□□□□□ -1.58
GTF3C2-202ENST00000359541 A0A1B0GVY2 172 aa5.18□□□□□ -1.58
GTF3C2-202ENST00000359541 VPS13BQ7Z7G8 4022 aa5.17□□□□□ -1.58
GTF3C2-202ENST00000359541 LRP1BQ9NZR2 4599 aa5.15□□□□□ -1.58
GTF3C2-202ENST00000359541 ROMO1P60602 79 aa5.14□□□□□ -1.59
GTF3C2-202ENST00000359541 Q5VSD8 79 aa5.14□□□□□ -1.59
GTF3C2-202ENST00000359541 NDUFAF8A1L188 74 aa5.13□□□□□ -1.59
GTF3C2-202ENST00000359541 C20orf166-AS1Q96NR2 134 aa5.13□□□□□ -1.59
GTF3C2-202ENST00000359541 A8MUU9 505 aa5.12□□□□□ -1.59
GTF3C2-202ENST00000359541 A0A0D9SG42 100 aa5.11□□□□□ -1.59
GTF3C2-202ENST00000359541 PKHD1L1Q86WI1 4243 aa5.08□□□□□ -1.6
GTF3C2-202ENST00000359541 SPATA8Q6RVD6 105 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms