RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 CACNA1BQ00975 2339 aa0.75□□□□□ -2.29
SMARCAD1-202ENST00000359052 IGHV3-64A0A075B6Q5 118 aa0.75□□□□□ -2.29
SMARCAD1-202ENST00000359052 TFF1P04155 84 aa0.75□□□□□ -2.29
SMARCAD1-202ENST00000359052 CDKN2A-AS1Q9UH64 79 aa0.75□□□□□ -2.29
SMARCAD1-202ENST00000359052 ZNF815PA8K554 130 aa0.75□□□□□ -2.29
SMARCAD1-202ENST00000359052 H0YGX0 51 aa0.75□□□□□ -2.29
SMARCAD1-202ENST00000359052 M0R3E3 92 aa0.75□□□□□ -2.29
SMARCAD1-202ENST00000359052 RTTNQ86VV8 2226 aa0.75□□□□□ -2.29
SMARCAD1-202ENST00000359052 ABCA4P78363 2273 aa0.75□□□□□ -2.29
SMARCAD1-202ENST00000359052 IGLV10-54A0A075B6I4 117 aa0.74□□□□□ -2.29
SMARCAD1-202ENST00000359052 HCG22E2RYF7 251 aa0.74□□□□□ -2.29
SMARCAD1-202ENST00000359052 JMJD7-PLA2G4BH0Y9G9 81 aa0.74□□□□□ -2.29
SMARCAD1-202ENST00000359052 WFDC11Q8NEX6 87 aa0.74□□□□□ -2.29
SMARCAD1-202ENST00000359052 SCGB3A1Q96QR1 104 aa0.74□□□□□ -2.29
SMARCAD1-202ENST00000359052 HIGD2AQ9BW72 106 aa0.74□□□□□ -2.29
SMARCAD1-202ENST00000359052 SPINK4O60575 86 aa0.74□□□□□ -2.29
SMARCAD1-202ENST00000359052 LYNX1P0DP58 116 aa0.74□□□□□ -2.29
SMARCAD1-202ENST00000359052 C20orf197Q8N268 126 aa0.74□□□□□ -2.29
SMARCAD1-202ENST00000359052 IGKV3D-7A0A0C4DH55 119 aa0.73□□□□□ -2.29
SMARCAD1-202ENST00000359052 IGKV3OR2-268A0A0C4DH90 116 aa0.73□□□□□ -2.29
SMARCAD1-202ENST00000359052 PRH1P02810 166 aa0.73□□□□□ -2.29
SMARCAD1-202ENST00000359052 CNTRLQ7Z7A1 2325 aa0.73□□□□□ -2.29
SMARCAD1-202ENST00000359052 DEFB109BQ30KR1 87 aa0.73□□□□□ -2.29
SMARCAD1-202ENST00000359052 Q8IZM0 81 aa0.73□□□□□ -2.29
SMARCAD1-202ENST00000359052 DEFB108BQ8NET1 73 aa0.73□□□□□ -2.29
SMARCAD1-202ENST00000359052 ENY2Q9NPA8 101 aa0.73□□□□□ -2.29
SMARCAD1-202ENST00000359052 MYO9AB2RTY4 2548 aa0.73□□□□□ -2.29
SMARCAD1-202ENST00000359052 ANKHD1Q8IWZ3 2542 aaKnown RBP0.73□□□□□ -2.29
SMARCAD1-202ENST00000359052 LYZL6O75951 148 aa0.73□□□□□ -2.29
SMARCAD1-202ENST00000359052 LYRM7Q5U5X0 104 aa0.73□□□□□ -2.29
SMARCAD1-202ENST00000359052 MDN1Q9NU22 5596 aa0.73□□□□□ -2.29
SMARCAD1-202ENST00000359052 FAM208BQ5VWN6 2430 aa0.73□□□□□ -2.29
SMARCAD1-202ENST00000359052 IGKV2-24A0A0C4DH68 120 aa0.73□□□□□ -2.29
SMARCAD1-202ENST00000359052 COX7BP24311 80 aa0.73□□□□□ -2.29
SMARCAD1-202ENST00000359052 LRRK2Q5S007 2527 aa0.73□□□□□ -2.29
SMARCAD1-202ENST00000359052 NCR3O14931 201 aa0.72□□□□□ -2.29
SMARCAD1-202ENST00000359052 ENHOQ6UWT2 76 aa0.72□□□□□ -2.29
SMARCAD1-202ENST00000359052 Q6ZRX8 168 aa0.72□□□□□ -2.29
SMARCAD1-202ENST00000359052 DEC1Q9P2X7 70 aa0.72□□□□□ -2.29
SMARCAD1-202ENST00000359052 TRAV21A0A0B4J279 112 aa0.72□□□□□ -2.29
SMARCAD1-202ENST00000359052 DEFB116Q30KQ4 102 aa0.72□□□□□ -2.29
SMARCAD1-202ENST00000359052 HIGD2BQ4VC39 106 aa0.72□□□□□ -2.29
SMARCAD1-202ENST00000359052 C14orf132Q9NPU4 83 aa0.72□□□□□ -2.29
SMARCAD1-202ENST00000359052 SPG11Q96JI7 2443 aa0.72□□□□□ -2.29
SMARCAD1-202ENST00000359052 M0R1W7 72 aa0.72□□□□□ -2.29
SMARCAD1-202ENST00000359052 UBE2AP49459 152 aa0.72□□□□□ -2.29
SMARCAD1-202ENST00000359052 STAB2Q8WWQ8 2551 aa0.72□□□□□ -2.29
SMARCAD1-202ENST00000359052 SYNE2Q8WXH0 6885 aaKnown RBP0.71□□□□□ -2.3
SMARCAD1-202ENST00000359052 STAB1Q9NY15 2570 aa0.71□□□□□ -2.3
SMARCAD1-202ENST00000359052 NBDYA0A0U1RRE5 68 aa0.71□□□□□ -2.3
SMARCAD1-202ENST00000359052 C10orf99Q6UWK7 81 aa0.71□□□□□ -2.3
SMARCAD1-202ENST00000359052 TRGV2A0A075B6R0 118 aa0.71□□□□□ -2.3
SMARCAD1-202ENST00000359052 PPP1R17O96001 155 aa0.71□□□□□ -2.3
SMARCAD1-202ENST00000359052 PRB1P04280 392 aa0.71□□□□□ -2.3
SMARCAD1-202ENST00000359052 C10orf55Q5SWW7 151 aa0.71□□□□□ -2.3
SMARCAD1-202ENST00000359052 NOTCH1P46531 2555 aa0.71□□□□□ -2.3
SMARCAD1-202ENST00000359052 A0A0G2JQZ4 141 aa0.71□□□□□ -2.3
SMARCAD1-202ENST00000359052 TRBV10-1A0A0K0K1A3 114 aa0.71□□□□□ -2.3
SMARCAD1-202ENST00000359052 DEFB134Q4QY38 66 aa0.71□□□□□ -2.3
SMARCAD1-202ENST00000359052 C1orf134Q5TEV5 83 aa0.71□□□□□ -2.3
SMARCAD1-202ENST00000359052 MUC5ACP98088 5654 aa0.7□□□□□ -2.3
SMARCAD1-202ENST00000359052 COX6CP09669 75 aa0.7□□□□□ -2.3
SMARCAD1-202ENST00000359052 POLQO75417 2590 aa0.7□□□□□ -2.3
SMARCAD1-202ENST00000359052 K7EQZ3 153 aa0.7□□□□□ -2.3
SMARCAD1-202ENST00000359052 COX7B2Q8TF08 81 aa0.7□□□□□ -2.3
SMARCAD1-202ENST00000359052 KRTAP4-1Q9BYQ7 146 aa0.7□□□□□ -2.3
SMARCAD1-202ENST00000359052 H3BUA1 57 aa0.7□□□□□ -2.3
SMARCAD1-202ENST00000359052 COX6B2Q6YFQ2 88 aa0.7□□□□□ -2.3
SMARCAD1-202ENST00000359052 Q8TAT8 98 aa0.7□□□□□ -2.3
SMARCAD1-202ENST00000359052 TRAV23DV6A0A075B6W5 121 aa0.7□□□□□ -2.3
SMARCAD1-202ENST00000359052 SPANXN1Q5VSR9 72 aa0.7□□□□□ -2.3
SMARCAD1-202ENST00000359052 COA5Q86WW8 74 aa0.7□□□□□ -2.3
SMARCAD1-202ENST00000359052 DEFB124Q8NES8 71 aa0.7□□□□□ -2.3
SMARCAD1-202ENST00000359052 HIVEP2P31629 2446 aa0.69□□□□□ -2.3
SMARCAD1-202ENST00000359052 CKS2P33552 79 aa0.69□□□□□ -2.3
SMARCAD1-202ENST00000359052 EMP1P54849 157 aa0.69□□□□□ -2.3
SMARCAD1-202ENST00000359052 FXYD4P59646 89 aa0.69□□□□□ -2.3
SMARCAD1-202ENST00000359052 DEFB113Q30KQ7 82 aa0.69□□□□□ -2.3
SMARCAD1-202ENST00000359052 SFTA2Q6UW10 78 aa0.69□□□□□ -2.3
SMARCAD1-202ENST00000359052 SNURFQ9Y675 71 aa0.69□□□□□ -2.3
SMARCAD1-202ENST00000359052 APC2O95996 2303 aa0.69□□□□□ -2.3
SMARCAD1-202ENST00000359052 M0R2T5 61 aa0.69□□□□□ -2.3
SMARCAD1-202ENST00000359052 CSAG1Q6PB30 78 aa0.69□□□□□ -2.3
SMARCAD1-202ENST00000359052 ETDCA0A1B0GVM5 59 aa0.69□□□□□ -2.3
SMARCAD1-202ENST00000359052 CCL3L1P16619 93 aa0.69□□□□□ -2.3
SMARCAD1-202ENST00000359052 FAM186AA6NE01 2351 aa0.69□□□□□ -2.3
SMARCAD1-202ENST00000359052 G3V318 75 aa0.69□□□□□ -2.3
SMARCAD1-202ENST00000359052 KRTAP19-5Q3LI72 72 aa0.69□□□□□ -2.3
SMARCAD1-202ENST00000359052 PKDREJQ9NTG1 2253 aa0.68□□□□□ -2.3
SMARCAD1-202ENST00000359052 TMSB15BA0A087X1C1 80 aa0.68□□□□□ -2.3
SMARCAD1-202ENST00000359052 C5orf56Q8N8D9 126 aa0.68□□□□□ -2.3
SMARCAD1-202ENST00000359052 NOTCH3Q9UM47 2321 aa0.68□□□□□ -2.3
SMARCAD1-202ENST00000359052 FASNP49327 2511 aaKnown RBP0.68□□□□□ -2.3
SMARCAD1-202ENST00000359052 KRTAP12-1P59990 96 aa0.68□□□□□ -2.3
SMARCAD1-202ENST00000359052 DEFB133Q30KQ1 61 aa0.68□□□□□ -2.3
SMARCAD1-202ENST00000359052 LCE1CQ5T751 118 aa0.68□□□□□ -2.3
SMARCAD1-202ENST00000359052 LCE1BQ5T7P3 118 aa0.68□□□□□ -2.3
SMARCAD1-202ENST00000359052 DYNLRB2Q8TF09 96 aa0.68□□□□□ -2.3
SMARCAD1-202ENST00000359052 COPS9Q8WXC6 57 aa0.68□□□□□ -2.3
SMARCAD1-202ENST00000359052 SPTSSAQ969W0 71 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms