RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 SPAG11AQ6PDA7 123 aa4.89□□□□□ -1.63
CD46-205ENST00000358170 COA5Q86WW8 74 aa4.89□□□□□ -1.63
CD46-205ENST00000358170 DNAH11Q96DT5 4516 aa4.89□□□□□ -1.63
CD46-205ENST00000358170 DNAH17Q9UFH2 4485 aa4.89□□□□□ -1.63
CD46-205ENST00000358170 LINC00483Q53H64 154 aa4.89□□□□□ -1.63
CD46-205ENST00000358170 H3BPC8 53 aa4.87□□□□□ -1.63
CD46-205ENST00000358170 Q1T7F1 81 aa4.87□□□□□ -1.63
CD46-205ENST00000358170 Q5W150 140 aa4.87□□□□□ -1.63
CD46-205ENST00000358170 SPTSSBQ8NFR3 76 aa4.87□□□□□ -1.63
CD46-205ENST00000358170 DNAH6Q9C0G6 4158 aa4.86□□□□□ -1.63
CD46-205ENST00000358170 TP53AIP1Q9HCN2 124 aa4.86□□□□□ -1.63
CD46-205ENST00000358170 HECTD4Q9Y4D8 3996 aa4.85□□□□□ -1.63
CD46-205ENST00000358170 Q8N9P0 234 aaPredicted RBP4.85□□□□□ -1.63
CD46-205ENST00000358170 KRTAP10-1P60331 282 aa4.84□□□□□ -1.63
CD46-205ENST00000358170 C1orf195Q5TG92 126 aa4.84□□□□□ -1.63
CD46-205ENST00000358170 SPANXA2-OT1Q8N9U9 137 aa4.84□□□□□ -1.63
CD46-205ENST00000358170 DYNC2H1Q8NCM8 4307 aaKnown RBP4.84□□□□□ -1.64
CD46-205ENST00000358170 IGLV7-46A0A075B6I9 117 aa4.84□□□□□ -1.64
CD46-205ENST00000358170 A6NED7 52 aa4.84□□□□□ -1.64
CD46-205ENST00000358170 PRR26Q8N8Z3 221 aa4.83□□□□□ -1.64
CD46-205ENST00000358170 Q5VV11 94 aa4.82□□□□□ -1.64
CD46-205ENST00000358170 V9GYY9 64 aa4.82□□□□□ -1.64
CD46-205ENST00000358170 LINC00313P59037 77 aa4.81□□□□□ -1.64
CD46-205ENST00000358170 LRP1BQ9NZR2 4599 aa4.81□□□□□ -1.64
CD46-205ENST00000358170 SMR3BP02814 79 aaPredicted RBP4.8□□□□□ -1.64
CD46-205ENST00000358170 HRES1P13985 223 aa4.8□□□□□ -1.64
CD46-205ENST00000358170 IGKV2D-30A0A075B6S6 120 aa4.8□□□□□ -1.64
CD46-205ENST00000358170 IGKV2-30P06310 120 aa4.8□□□□□ -1.64
CD46-205ENST00000358170 PLA2G1BP04054 148 aaKnown RBP4.79□□□□□ -1.64
CD46-205ENST00000358170 KRTAP13-2Q52LG2 175 aa4.79□□□□□ -1.64
CD46-205ENST00000358170 C4orf48Q5BLP8 95 aa4.79□□□□□ -1.64
CD46-205ENST00000358170 LIMD2Q9BT23 127 aa4.79□□□□□ -1.64
CD46-205ENST00000358170 ASB16-AS1Q495Z4 193 aa4.79□□□□□ -1.64
CD46-205ENST00000358170 SSBP3-AS1Q7Z2R9 100 aa4.79□□□□□ -1.64
CD46-205ENST00000358170 PMAIP1Q13794 54 aa4.79□□□□□ -1.64
CD46-205ENST00000358170 HYDINQ4G0P3 5121 aa4.77□□□□□ -1.65
CD46-205ENST00000358170 LOC101927531A0A1B0GV80 90 aa4.76□□□□□ -1.65
CD46-205ENST00000358170 DNAH5Q8TE73 4624 aa4.76□□□□□ -1.65
CD46-205ENST00000358170 TYMSOSQ8TAI1 123 aa4.75□□□□□ -1.65
CD46-205ENST00000358170 SPINK1P00995 79 aa4.74□□□□□ -1.65
CD46-205ENST00000358170 LCA10Q71F78 164 aa4.73□□□□□ -1.65
CD46-205ENST00000358170 SPINK7P58062 85 aa4.73□□□□□ -1.65
CD46-205ENST00000358170 C8orf87E5RJ46 101 aa4.72□□□□□ -1.65
CD46-205ENST00000358170 ACYP2P14621 99 aa4.71□□□□□ -1.65
CD46-205ENST00000358170 FAM229AH3BQW9 127 aa4.71□□□□□ -1.66
CD46-205ENST00000358170 DMBT1Q9UGM3 2413 aaPredicted RBP4.71□□□□□ -1.66
CD46-205ENST00000358170 ALMS1Q8TCU4 4167 aa4.71□□□□□ -1.66
CD46-205ENST00000358170 C9orf92A6NGG3 77 aa4.7□□□□□ -1.66
CD46-205ENST00000358170 KRTAP1-4P0C5Y4 121 aa4.7□□□□□ -1.66
CD46-205ENST00000358170 VPS13BQ7Z7G8 4022 aa4.69□□□□□ -1.66
CD46-205ENST00000358170 FLG2Q5D862 2391 aaPredicted RBP4.69□□□□□ -1.66
CD46-205ENST00000358170 Q75L30 129 aa4.69□□□□□ -1.66
CD46-205ENST00000358170 Q8N1X5 172 aa4.68□□□□□ -1.66
CD46-205ENST00000358170 LINC01558Q9Y6Z2 57 aa4.68□□□□□ -1.66
CD46-205ENST00000358170 FAT1Q14517 4588 aa4.68□□□□□ -1.66
CD46-205ENST00000358170 KRTAP13-3Q3SY46 172 aa4.68□□□□□ -1.66
CD46-205ENST00000358170 Q6ZSA8 131 aa4.68□□□□□ -1.66
CD46-205ENST00000358170 C7orf65Q6ZTY9 151 aa4.68□□□□□ -1.66
CD46-205ENST00000358170 PKHD1P08F94 4074 aa4.67□□□□□ -1.66
CD46-205ENST00000358170 FAT2Q9NYQ8 4349 aa4.66□□□□□ -1.66
CD46-205ENST00000358170 LINC00304Q8N9R0 145 aa4.65□□□□□ -1.66
CD46-205ENST00000358170 A0A1B0GU69 56 aa4.65□□□□□ -1.67
CD46-205ENST00000358170 CDC42SE1Q9NRR8 79 aa4.63□□□□□ -1.67
CD46-205ENST00000358170 KRTAP16-1A8MUX0 517 aa4.63□□□□□ -1.67
CD46-205ENST00000358170 DMAC1Q96GE9 116 aa4.63□□□□□ -1.67
CD46-205ENST00000358170 ATP11AUNQ6ZP68 121 aa4.62□□□□□ -1.67
CD46-205ENST00000358170 PKD1P98161 4303 aa4.61□□□□□ -1.67
CD46-205ENST00000358170 SEC61GP60059 68 aa4.59□□□□□ -1.67
CD46-205ENST00000358170 LCE2DQ5TA82 110 aaPredicted RBP4.59□□□□□ -1.68
CD46-205ENST00000358170 DYNC1H1Q14204 4646 aaKnown RBP4.58□□□□□ -1.68
CD46-205ENST00000358170 SACSQ9NZJ4 4579 aa4.56□□□□□ -1.68
CD46-205ENST00000358170 KTN1-AS1Q86SY8 53 aa4.55□□□□□ -1.68
CD46-205ENST00000358170 A6NN06 94 aa4.54□□□□□ -1.68
CD46-205ENST00000358170 PRAC1Q96KF2 57 aa4.54□□□□□ -1.68
CD46-205ENST00000358170 MIR22HGQ0VDD5 57 aa4.53□□□□□ -1.68
CD46-205ENST00000358170 UQCR11O14957 56 aa4.52□□□□□ -1.69
CD46-205ENST00000358170 ADM2Q7Z4H4 148 aa4.51□□□□□ -1.69
CD46-205ENST00000358170 MYCBP2O75592 4640 aa4.51□□□□□ -1.69
CD46-205ENST00000358170 RBM12B-AS1Q9P1G2 102 aa4.49□□□□□ -1.69
CD46-205ENST00000358170 LRP1Q07954 4544 aaKnown RBP4.49□□□□□ -1.69
CD46-205ENST00000358170 KMT2CQ8NEZ4 4911 aaKnown RBP4.48□□□□□ -1.69
CD46-205ENST00000358170 APOBP04114 4563 aaKnown RBP4.46□□□□□ -1.69
CD46-205ENST00000358170 SPATA8Q6RVD6 105 aa4.44□□□□□ -1.7
CD46-205ENST00000358170 A0A1B0GVY2 172 aa4.44□□□□□ -1.7
CD46-205ENST00000358170 KRTAP3-1Q9BYR8 98 aa4.42□□□□□ -1.7
CD46-205ENST00000358170 A8MUU9 505 aa4.42□□□□□ -1.7
CD46-205ENST00000358170 C20orf166-AS1Q96NR2 134 aa4.41□□□□□ -1.7
CD46-205ENST00000358170 KRTAP10-4P60372 401 aaPredicted RBP4.41□□□□□ -1.7
CD46-205ENST00000358170 RPS29P62273 56 aaKnown RBP4.4□□□□□ -1.7
CD46-205ENST00000358170 Q5VSD8 79 aa4.39□□□□□ -1.71
CD46-205ENST00000358170 A0A1B0GU33 70 aa4.38□□□□□ -1.71
CD46-205ENST00000358170 KRTAP21-3Q3LHN1 58 aa4.38□□□□□ -1.71
CD46-205ENST00000358170 RYR2Q92736 4967 aa4.37□□□□□ -1.71
CD46-205ENST00000358170 FAT3Q8TDW7 4589 aa4.37□□□□□ -1.71
CD46-205ENST00000358170 CRIPTQ9P021 101 aa4.36□□□□□ -1.71
CD46-205ENST00000358170 KIAA1109Q2LD37 5005 aa4.36□□□□□ -1.71
CD46-205ENST00000358170 H0YAA0 97 aa4.36□□□□□ -1.71
CD46-205ENST00000358170 CSAG1Q6PB30 78 aa4.35□□□□□ -1.71
CD46-205ENST00000358170 A0A0D9SG42 100 aa4.34□□□□□ -1.71
CD46-205ENST00000358170 COX6B2Q6YFQ2 88 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms