RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 DSCR10P59022 87 aa4.21□□□□□ -1.74
COL4A3BP-202ENST00000357457 BVES-AS1Q5T3Y7 98 aa4.21□□□□□ -1.74
COL4A3BP-202ENST00000357457 NOTCH2NLQ7Z3S9 236 aa4.21□□□□□ -1.74
COL4A3BP-202ENST00000357457 A0A087WSZ3 146 aa4.2□□□□□ -1.74
COL4A3BP-202ENST00000357457 FAM240AA0A1B0GVK7 77 aa4.2□□□□□ -1.74
COL4A3BP-202ENST00000357457 MUC12Q9UKN1 5478 aa4.19□□□□□ -1.74
COL4A3BP-202ENST00000357457 LOC105371267A0A1B0GV96 52 aa4.19□□□□□ -1.74
COL4A3BP-202ENST00000357457 LINC00313P59037 77 aa4.19□□□□□ -1.74
COL4A3BP-202ENST00000357457 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
COL4A3BP-202ENST00000357457 C12orf57Q99622 126 aa4.17□□□□□ -1.74
COL4A3BP-202ENST00000357457 NEBP20929 6669 aa4.16□□□□□ -1.74
COL4A3BP-202ENST00000357457 A0A1W2PNM2 257 aa4.16□□□□□ -1.74
COL4A3BP-202ENST00000357457 H3BMG7 143 aa4.15□□□□□ -1.75
COL4A3BP-202ENST00000357457 Q8N9P0 234 aaPredicted RBP4.15□□□□□ -1.75
COL4A3BP-202ENST00000357457 H0YGX0 51 aa4.14□□□□□ -1.75
COL4A3BP-202ENST00000357457 SNCGO76070 127 aa4.14□□□□□ -1.75
COL4A3BP-202ENST00000357457 IGKV4-1P06312 121 aa4.14□□□□□ -1.75
COL4A3BP-202ENST00000357457 C4orf26Q17RF5 130 aa4.14□□□□□ -1.75
COL4A3BP-202ENST00000357457 SIGMAR1Q99720 223 aa4.14□□□□□ -1.75
COL4A3BP-202ENST00000357457 LINC00472Q9H8W2 130 aa4.13□□□□□ -1.75
COL4A3BP-202ENST00000357457 TRBV7-4A0A0J9YYF1 115 aa4.12□□□□□ -1.75
COL4A3BP-202ENST00000357457 A0A1B0GX51 115 aa4.12□□□□□ -1.75
COL4A3BP-202ENST00000357457 A8MWP4 228 aa4.11□□□□□ -1.75
COL4A3BP-202ENST00000357457 IGKV2D-30A0A075B6S6 120 aa4.09□□□□□ -1.75
COL4A3BP-202ENST00000357457 FABP2P12104 132 aa4.09□□□□□ -1.75
COL4A3BP-202ENST00000357457 SPINK7P58062 85 aa4.09□□□□□ -1.75
COL4A3BP-202ENST00000357457 IGHV6-1A0A0B4J1U7 121 aa4.08□□□□□ -1.76
COL4A3BP-202ENST00000357457 A0A0B4J2C4 111 aa4.08□□□□□ -1.76
COL4A3BP-202ENST00000357457 DLEU1O43261 78 aa4.08□□□□□ -1.76
COL4A3BP-202ENST00000357457 COX8AP10176 69 aa4.08□□□□□ -1.76
COL4A3BP-202ENST00000357457 DEFB116Q30KQ4 102 aa4.08□□□□□ -1.76
COL4A3BP-202ENST00000357457 HIST3H2BBQ8N257 126 aa4.08□□□□□ -1.76
COL4A3BP-202ENST00000357457 ANKRD29Q8N6D5 301 aa4.08□□□□□ -1.76
COL4A3BP-202ENST00000357457 RAB37Q96AX2 223 aa4.08□□□□□ -1.76
COL4A3BP-202ENST00000357457 HIST1H2BLQ99880 126 aa4.08□□□□□ -1.76
COL4A3BP-202ENST00000357457 C8orf87E5RJ46 101 aa4.07□□□□□ -1.76
COL4A3BP-202ENST00000357457 ZCCHC13Q8WW36 166 aaKnown RBP4.07□□□□□ -1.76
COL4A3BP-202ENST00000357457 A0A1B0GVX0 72 aa4.05□□□□□ -1.76
COL4A3BP-202ENST00000357457 PSMB2P49721 201 aa4.05□□□□□ -1.76
COL4A3BP-202ENST00000357457 A0A1B0GV72 72 aa4.04□□□□□ -1.76
COL4A3BP-202ENST00000357457 H3BQ85 93 aa4.04□□□□□ -1.76
COL4A3BP-202ENST00000357457 NDUFS5O43920 106 aa4.04□□□□□ -1.76
COL4A3BP-202ENST00000357457 S100A2P29034 98 aa4.04□□□□□ -1.76
COL4A3BP-202ENST00000357457 HIGD1BQ9P298 99 aa4.04□□□□□ -1.76
COL4A3BP-202ENST00000357457 PRO0628Q9UI54 55 aa4.04□□□□□ -1.76
COL4A3BP-202ENST00000357457 PSPHP1O15172 72 aa4.03□□□□□ -1.76
COL4A3BP-202ENST00000357457 CCKP06307 115 aa4.03□□□□□ -1.76
COL4A3BP-202ENST00000357457 PRO1854Q9UHT4 67 aa4.03□□□□□ -1.76
COL4A3BP-202ENST00000357457 MDN1Q9NU22 5596 aa4.03□□□□□ -1.76
COL4A3BP-202ENST00000357457 TMEM256-PLSCR3K7ERE1 68 aa4.02□□□□□ -1.77
COL4A3BP-202ENST00000357457 TRACP01848 142 aa4.02□□□□□ -1.77
COL4A3BP-202ENST00000357457 ORMDL1Q9P0S3 153 aa4.02□□□□□ -1.77
COL4A3BP-202ENST00000357457 CXCL6P80162 114 aa4.01□□□□□ -1.77
COL4A3BP-202ENST00000357457 WFDC13Q8IUB5 93 aa4.01□□□□□ -1.77
COL4A3BP-202ENST00000357457 C2orf91Q6ZV80 131 aa4□□□□□ -1.77
COL4A3BP-202ENST00000357457 CEND1Q8N111 149 aa4□□□□□ -1.77
COL4A3BP-202ENST00000357457 C14orf144Q96I85 54 aa4□□□□□ -1.77
COL4A3BP-202ENST00000357457 SMIM26A0A096LP01 95 aa3.99□□□□□ -1.77
COL4A3BP-202ENST00000357457 J3KT08 172 aa3.99□□□□□ -1.77
COL4A3BP-202ENST00000357457 DNAL4O96015 105 aa3.99□□□□□ -1.77
COL4A3BP-202ENST00000357457 KMT2DO14686 5537 aa3.98□□□□□ -1.77
COL4A3BP-202ENST00000357457 FXYD2P54710 66 aa3.97□□□□□ -1.77
COL4A3BP-202ENST00000357457 H1FX-AS1Q4G0G2 97 aa3.97□□□□□ -1.77
COL4A3BP-202ENST00000357457 RBM3P98179 157 aaKnown RBP3.96□□□□□ -1.78
COL4A3BP-202ENST00000357457 NDUFB1O75438 58 aa3.95□□□□□ -1.78
COL4A3BP-202ENST00000357457 BATFQ16520 125 aa3.95□□□□□ -1.78
COL4A3BP-202ENST00000357457 KRTAP20-1Q3LI63 56 aa3.95□□□□□ -1.78
COL4A3BP-202ENST00000357457 Q6ZQT0 140 aa3.95□□□□□ -1.78
COL4A3BP-202ENST00000357457 VPS25Q9BRG1 176 aa3.95□□□□□ -1.78
COL4A3BP-202ENST00000357457 C8orf17Q9NRJ1 99 aa3.95□□□□□ -1.78
COL4A3BP-202ENST00000357457 COX6CP09669 75 aa3.94□□□□□ -1.78
COL4A3BP-202ENST00000357457 SPATA45Q537H7 98 aa3.94□□□□□ -1.78
COL4A3BP-202ENST00000357457 DSCR8Q96T75 97 aa3.94□□□□□ -1.78
COL4A3BP-202ENST00000357457 IGKV3D-7A0A0C4DH55 119 aa3.93□□□□□ -1.78
COL4A3BP-202ENST00000357457 A6NN06 94 aa3.93□□□□□ -1.78
COL4A3BP-202ENST00000357457 LYRM7Q5U5X0 104 aa3.93□□□□□ -1.78
COL4A3BP-202ENST00000357457 TSTD3H0UI37 97 aa3.92□□□□□ -1.78
COL4A3BP-202ENST00000357457 SCGB1A1P11684 91 aa3.92□□□□□ -1.78
COL4A3BP-202ENST00000357457 C9JAW5 83 aa3.91□□□□□ -1.78
COL4A3BP-202ENST00000357457 MT1BP07438 61 aa3.91□□□□□ -1.78
COL4A3BP-202ENST00000357457 KRTAP5-9P26371 169 aa3.91□□□□□ -1.78
COL4A3BP-202ENST00000357457 A0A1B0GW54 56 aa3.9□□□□□ -1.79
COL4A3BP-202ENST00000357457 PMAIP1Q13794 54 aa3.9□□□□□ -1.79
COL4A3BP-202ENST00000357457 VAMP8Q9BV40 100 aa3.9□□□□□ -1.79
COL4A3BP-202ENST00000357457 K7ERJ3 54 aa3.89□□□□□ -1.79
COL4A3BP-202ENST00000357457 CAMK2N1Q7Z7J9 78 aa3.89□□□□□ -1.79
COL4A3BP-202ENST00000357457 SMIM20Q8N5G0 67 aa3.89□□□□□ -1.79
COL4A3BP-202ENST00000357457 BAALC-AS2P0C853 105 aa3.88□□□□□ -1.79
COL4A3BP-202ENST00000357457 KRTAP19-8Q3LI54 63 aa3.88□□□□□ -1.79
COL4A3BP-202ENST00000357457 PRR15Q8IV56 129 aa3.88□□□□□ -1.79
COL4A3BP-202ENST00000357457 S100A1P23297 94 aa3.87□□□□□ -1.79
COL4A3BP-202ENST00000357457 MP68P56378 58 aa3.87□□□□□ -1.79
COL4A3BP-202ENST00000357457 KRTAP10-5P60370 271 aa3.87□□□□□ -1.79
COL4A3BP-202ENST00000357457 HSD52Q0P140 79 aa3.87□□□□□ -1.79
COL4A3BP-202ENST00000357457 LCE1AQ5T7P2 110 aa3.87□□□□□ -1.79
COL4A3BP-202ENST00000357457 TMEM254Q8TBM7 123 aa3.87□□□□□ -1.79
COL4A3BP-202ENST00000357457 MRPL34Q9BQ48 92 aaKnown RBP3.87□□□□□ -1.79
COL4A3BP-202ENST00000357457 Q5VV11 94 aa3.86□□□□□ -1.79
COL4A3BP-202ENST00000357457 ANAPC13Q9BS18 74 aa3.86□□□□□ -1.79
COL4A3BP-202ENST00000357457 SPRR2GQ9BYE4 73 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms