RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 ATP11AUNQ6ZP68 121 aa4.09□□□□□ -1.75
RTN4-203ENST00000357376 SSBP3-AS1Q7Z2R9 100 aa4.09□□□□□ -1.75
RTN4-203ENST00000357376 Q96NJ1 140 aa4.08□□□□□ -1.76
RTN4-203ENST00000357376 Q75L30 129 aa4.08□□□□□ -1.76
RTN4-203ENST00000357376 PLA2G1BP04054 148 aaKnown RBP4.07□□□□□ -1.76
RTN4-203ENST00000357376 TYMSOSQ8TAI1 123 aa4.07□□□□□ -1.76
RTN4-203ENST00000357376 CDC42SE1Q9NRR8 79 aa4.07□□□□□ -1.76
RTN4-203ENST00000357376 PLAC8Q9NZF1 115 aa4.07□□□□□ -1.76
RTN4-203ENST00000357376 Q6ZRN7 208 aaPredicted RBP4.06□□□□□ -1.76
RTN4-203ENST00000357376 KTN1-AS1Q86SY8 53 aa4.06□□□□□ -1.76
RTN4-203ENST00000357376 TGP01266 2768 aa4.06□□□□□ -1.76
RTN4-203ENST00000357376 SPINK7P58062 85 aa4.06□□□□□ -1.76
RTN4-203ENST00000357376 LINC00483Q53H64 154 aa4.05□□□□□ -1.76
RTN4-203ENST00000357376 KRTAP13-1Q8IUC0 172 aa4.05□□□□□ -1.76
RTN4-203ENST00000357376 LINC01558Q9Y6Z2 57 aa4.05□□□□□ -1.76
RTN4-203ENST00000357376 CSMD3Q7Z407 3707 aa4.04□□□□□ -1.76
RTN4-203ENST00000357376 Q5W150 140 aa4.04□□□□□ -1.76
RTN4-203ENST00000357376 Q6ZR54 194 aa4.04□□□□□ -1.76
RTN4-203ENST00000357376 LCA10Q71F78 164 aa4.03□□□□□ -1.76
RTN4-203ENST00000357376 Q8N1X5 172 aa4.02□□□□□ -1.77
RTN4-203ENST00000357376 COL7A1Q02388 2944 aa4.02□□□□□ -1.77
RTN4-203ENST00000357376 KRTAP10-2P60368 255 aa4.02□□□□□ -1.77
RTN4-203ENST00000357376 UQCR11O14957 56 aa4.01□□□□□ -1.77
RTN4-203ENST00000357376 SMR3BP02814 79 aaPredicted RBP4.01□□□□□ -1.77
RTN4-203ENST00000357376 C9orf92A6NGG3 77 aa4.01□□□□□ -1.77
RTN4-203ENST00000357376 MIR22HGQ0VDD5 57 aa4.01□□□□□ -1.77
RTN4-203ENST00000357376 RBM12B-AS1Q9P1G2 102 aa3.99□□□□□ -1.77
RTN4-203ENST00000357376 LINC00304Q8N9R0 145 aa3.98□□□□□ -1.77
RTN4-203ENST00000357376 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
RTN4-203ENST00000357376 KRTAP10-1P60331 282 aa3.96□□□□□ -1.78
RTN4-203ENST00000357376 K7ERS5 55 aa3.96□□□□□ -1.78
RTN4-203ENST00000357376 DMAC1Q96GE9 116 aa3.95□□□□□ -1.78
RTN4-203ENST00000357376 FBN3Q75N90 2809 aa3.93□□□□□ -1.78
RTN4-203ENST00000357376 ASB16-AS1Q495Z4 193 aa3.93□□□□□ -1.78
RTN4-203ENST00000357376 KRTAP13-2Q52LG2 175 aa3.92□□□□□ -1.78
RTN4-203ENST00000357376 A6NN06 94 aa3.91□□□□□ -1.78
RTN4-203ENST00000357376 DMBT1Q9UGM3 2413 aaPredicted RBP3.91□□□□□ -1.78
RTN4-203ENST00000357376 MEGF8Q7Z7M0 2845 aa3.9□□□□□ -1.79
RTN4-203ENST00000357376 HUWE1Q7Z6Z7 4374 aaKnown RBP3.89□□□□□ -1.79
RTN4-203ENST00000357376 DNAH10Q8IVF4 4471 aa3.87□□□□□ -1.79
RTN4-203ENST00000357376 ADM2Q7Z4H4 148 aa3.87□□□□□ -1.79
RTN4-203ENST00000357376 ANK2Q01484 3957 aa3.85□□□□□ -1.79
RTN4-203ENST00000357376 A0A1B0GU33 70 aa3.84□□□□□ -1.8
RTN4-203ENST00000357376 CSAG1Q6PB30 78 aa3.84□□□□□ -1.8
RTN4-203ENST00000357376 FLG2Q5D862 2391 aaPredicted RBP3.83□□□□□ -1.8
RTN4-203ENST00000357376 SPATA8Q6RVD6 105 aa3.83□□□□□ -1.8
RTN4-203ENST00000357376 LINC01554Q52M75 96 aa3.82□□□□□ -1.8
RTN4-203ENST00000357376 A0A0D9SG42 100 aa3.82□□□□□ -1.8
RTN4-203ENST00000357376 KRTAP13-3Q3SY46 172 aa3.81□□□□□ -1.8
RTN4-203ENST00000357376 KRTAP1-4P0C5Y4 121 aa3.81□□□□□ -1.8
RTN4-203ENST00000357376 H3BS24 57 aa3.8□□□□□ -1.8
RTN4-203ENST00000357376 CRIPTQ9P021 101 aa3.8□□□□□ -1.8
RTN4-203ENST00000357376 KRTAP16-1A8MUX0 517 aa3.78□□□□□ -1.8
RTN4-203ENST00000357376 Q6ZSA8 131 aa3.78□□□□□ -1.8
RTN4-203ENST00000357376 PLECQ15149 4684 aaKnown RBP3.76□□□□□ -1.81
RTN4-203ENST00000357376 LYSTQ99698 3801 aa3.76□□□□□ -1.81
RTN4-203ENST00000357376 DNAH9Q9NYC9 4486 aa3.75□□□□□ -1.81
RTN4-203ENST00000357376 H1FX-AS1Q4G0G2 97 aa3.74□□□□□ -1.81
RTN4-203ENST00000357376 SPINT4Q6UDR6 99 aa3.72□□□□□ -1.81
RTN4-203ENST00000357376 COX6B2Q6YFQ2 88 aa3.71□□□□□ -1.82
RTN4-203ENST00000357376 RPS29P62273 56 aaKnown RBP3.7□□□□□ -1.82
RTN4-203ENST00000357376 DNAH1Q9P2D7 4330 aa3.69□□□□□ -1.82
RTN4-203ENST00000357376 A8MUU9 505 aa3.68□□□□□ -1.82
RTN4-203ENST00000357376 H0YAA0 97 aa3.68□□□□□ -1.82
RTN4-203ENST00000357376 C20orf166-AS1Q96NR2 134 aa3.68□□□□□ -1.82
RTN4-203ENST00000357376 S4R3F8 94 aa3.68□□□□□ -1.82
RTN4-203ENST00000357376 STARD9Q9P2P6 4700 aa3.67□□□□□ -1.82
RTN4-203ENST00000357376 Q5VSD8 79 aa3.67□□□□□ -1.82
RTN4-203ENST00000357376 CMYA5Q8N3K9 4069 aa3.67□□□□□ -1.82
RTN4-203ENST00000357376 RPL37P61927 97 aaKnown RBP3.66□□□□□ -1.82
RTN4-203ENST00000357376 DNAH11Q96DT5 4516 aa3.64□□□□□ -1.83
RTN4-203ENST00000357376 DNAH3Q8TD57 4116 aa3.64□□□□□ -1.83
RTN4-203ENST00000357376 KRTAP25-1Q3LHN0 102 aa3.63□□□□□ -1.83
RTN4-203ENST00000357376 DNAH7Q8WXX0 4024 aa3.63□□□□□ -1.83
RTN4-203ENST00000357376 DNAH8Q96JB1 4490 aa3.63□□□□□ -1.83
RTN4-203ENST00000357376 ROMO1P60602 79 aa3.63□□□□□ -1.83
RTN4-203ENST00000357376 FRAS1Q86XX4 4008 aa3.62□□□□□ -1.83
RTN4-203ENST00000357376 KMT2AQ03164 3969 aa3.62□□□□□ -1.83
RTN4-203ENST00000357376 VPS13DQ5THJ4 4388 aa3.61□□□□□ -1.83
RTN4-203ENST00000357376 PRKDCP78527 4128 aaKnown RBP3.61□□□□□ -1.83
RTN4-203ENST00000357376 KRTAP3-1Q9BYR8 98 aa3.59□□□□□ -1.84
RTN4-203ENST00000357376 DNAH17Q9UFH2 4485 aa3.58□□□□□ -1.84
RTN4-203ENST00000357376 LRP1BQ9NZR2 4599 aa3.57□□□□□ -1.84
RTN4-203ENST00000357376 DNAH2Q9P225 4427 aa3.55□□□□□ -1.84
RTN4-203ENST00000357376 J3QL48 77 aa3.54□□□□□ -1.84
RTN4-203ENST00000357376 XP32Q5T750 250 aa3.54□□□□□ -1.84
RTN4-203ENST00000357376 DNHD1Q96M86 4753 aa3.54□□□□□ -1.84
RTN4-203ENST00000357376 R4GN34 69 aa3.53□□□□□ -1.84
RTN4-203ENST00000357376 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
RTN4-203ENST00000357376 DNAH6Q9C0G6 4158 aa3.52□□□□□ -1.85
RTN4-203ENST00000357376 M0QZ58 72 aa3.52□□□□□ -1.85
RTN4-203ENST00000357376 P0C880 135 aa3.52□□□□□ -1.85
RTN4-203ENST00000357376 HECTD4Q9Y4D8 3996 aa3.52□□□□□ -1.85
RTN4-203ENST00000357376 DNAH5Q8TE73 4624 aa3.52□□□□□ -1.85
RTN4-203ENST00000357376 A0A1B0GVY2 172 aa3.51□□□□□ -1.85
RTN4-203ENST00000357376 FAT1Q14517 4588 aa3.49□□□□□ -1.85
RTN4-203ENST00000357376 DYNC2H1Q8NCM8 4307 aaKnown RBP3.48□□□□□ -1.85
RTN4-203ENST00000357376 KRTAP10-8P60410 259 aa3.48□□□□□ -1.85
RTN4-203ENST00000357376 VPS13BQ7Z7G8 4022 aa3.47□□□□□ -1.85
RTN4-203ENST00000357376 CAMK2N1Q7Z7J9 78 aa3.46□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms