RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 C8orf87E5RJ46 101 aa7.44□□□□□ -1.22
PCDHB11-201ENST00000354757 ANK3Q12955 4377 aaKnown RBP7.43□□□□□ -1.22
PCDHB11-201ENST00000354757 Q8N9P0 234 aaPredicted RBP7.42□□□□□ -1.22
PCDHB11-201ENST00000354757 Q5VV11 94 aa7.42□□□□□ -1.22
PCDHB11-201ENST00000354757 A8MU10 97 aa7.41□□□□□ -1.22
PCDHB11-201ENST00000354757 RBM12B-AS1Q9P1G2 102 aa7.4□□□□□ -1.22
PCDHB11-201ENST00000354757 A0A087X002 238 aa7.39□□□□□ -1.23
PCDHB11-201ENST00000354757 SPRR1BP22528 89 aa7.38□□□□□ -1.23
PCDHB11-201ENST00000354757 IGLV8-61A0A075B6I0 122 aa7.38□□□□□ -1.23
PCDHB11-201ENST00000354757 Q5VSD8 79 aa7.37□□□□□ -1.23
PCDHB11-201ENST00000354757 SPANXA2-OT1Q8N9U9 137 aa7.37□□□□□ -1.23
PCDHB11-201ENST00000354757 FBN3Q75N90 2809 aa7.36□□□□□ -1.23
PCDHB11-201ENST00000354757 A0A1B0GU69 56 aa7.35□□□□□ -1.23
PCDHB11-201ENST00000354757 ACYP2P14621 99 aa7.35□□□□□ -1.23
PCDHB11-201ENST00000354757 KRTAP21-3Q3LHN1 58 aa7.35□□□□□ -1.23
PCDHB11-201ENST00000354757 COL7A1Q02388 2944 aa7.34□□□□□ -1.23
PCDHB11-201ENST00000354757 LINC00472Q9H8W2 130 aa7.34□□□□□ -1.24
PCDHB11-201ENST00000354757 CDC42SE1Q9NRR8 79 aa7.34□□□□□ -1.24
PCDHB11-201ENST00000354757 Q8N1X5 172 aa7.33□□□□□ -1.24
PCDHB11-201ENST00000354757 ZCCHC13Q8WW36 166 aaKnown RBP7.32□□□□□ -1.24
PCDHB11-201ENST00000354757 MMP24-AS1A0A0U1RRL7 71 aa7.31□□□□□ -1.24
PCDHB11-201ENST00000354757 IGLV7-46A0A075B6I9 117 aa7.3□□□□□ -1.24
PCDHB11-201ENST00000354757 Q75L30 129 aa7.29□□□□□ -1.24
PCDHB11-201ENST00000354757 LCA10Q71F78 164 aa7.27□□□□□ -1.24
PCDHB11-201ENST00000354757 PRAC1Q96KF2 57 aa7.27□□□□□ -1.24
PCDHB11-201ENST00000354757 SPINK7P58062 85 aa7.26□□□□□ -1.25
PCDHB11-201ENST00000354757 COX6B2Q6YFQ2 88 aa7.23□□□□□ -1.25
PCDHB11-201ENST00000354757 K7ERS5 55 aa7.23□□□□□ -1.25
PCDHB11-201ENST00000354757 LINC00483Q53H64 154 aa7.23□□□□□ -1.25
PCDHB11-201ENST00000354757 NOTCH2NLQ7Z3S9 236 aa7.23□□□□□ -1.25
PCDHB11-201ENST00000354757 LINC01558Q9Y6Z2 57 aa7.2□□□□□ -1.26
PCDHB11-201ENST00000354757 HRES1P13985 223 aa7.19□□□□□ -1.26
PCDHB11-201ENST00000354757 KRTAP29-1A8MX34 341 aaPredicted RBP7.19□□□□□ -1.26
PCDHB11-201ENST00000354757 KRTAP13-1Q8IUC0 172 aa7.19□□□□□ -1.26
PCDHB11-201ENST00000354757 KRTAP13-2Q52LG2 175 aa7.18□□□□□ -1.26
PCDHB11-201ENST00000354757 UQCR11O14957 56 aa7.17□□□□□ -1.26
PCDHB11-201ENST00000354757 MIR22HGQ0VDD5 57 aa7.17□□□□□ -1.26
PCDHB11-201ENST00000354757 MEGF8Q7Z7M0 2845 aa7.17□□□□□ -1.26
PCDHB11-201ENST00000354757 ANK2Q01484 3957 aa7.16□□□□□ -1.26
PCDHB11-201ENST00000354757 Q6ZSA8 131 aa7.13□□□□□ -1.27
PCDHB11-201ENST00000354757 Q5W150 140 aa7.12□□□□□ -1.27
PCDHB11-201ENST00000354757 A6NN06 94 aa7.09□□□□□ -1.28
PCDHB11-201ENST00000354757 LINC01554Q52M75 96 aa7.08□□□□□ -1.28
PCDHB11-201ENST00000354757 CSMD3Q7Z407 3707 aa7.05□□□□□ -1.28
PCDHB11-201ENST00000354757 H3BS24 57 aa7.05□□□□□ -1.28
PCDHB11-201ENST00000354757 ADM2Q7Z4H4 148 aa7.04□□□□□ -1.28
PCDHB11-201ENST00000354757 CSAG1Q6PB30 78 aa7□□□□□ -1.29
PCDHB11-201ENST00000354757 A0A0D9SG42 100 aa6.98□□□□□ -1.29
PCDHB11-201ENST00000354757 KRTAP1-4P0C5Y4 121 aa6.97□□□□□ -1.29
PCDHB11-201ENST00000354757 LYSTQ99698 3801 aa6.9□□□□□ -1.3
PCDHB11-201ENST00000354757 M0R2T5 61 aa6.9□□□□□ -1.31
PCDHB11-201ENST00000354757 CMYA5Q8N3K9 4069 aa6.89□□□□□ -1.31
PCDHB11-201ENST00000354757 CRIPTQ9P021 101 aa6.89□□□□□ -1.31
PCDHB11-201ENST00000354757 DNHD1Q96M86 4753 aa6.89□□□□□ -1.31
PCDHB11-201ENST00000354757 ASB16-AS1Q495Z4 193 aa6.87□□□□□ -1.31
PCDHB11-201ENST00000354757 DMAC1Q96GE9 116 aa6.87□□□□□ -1.31
PCDHB11-201ENST00000354757 SPINT4Q6UDR6 99 aa6.86□□□□□ -1.31
PCDHB11-201ENST00000354757 SEC61BP60468 96 aaKnown RBP6.85□□□□□ -1.31
PCDHB11-201ENST00000354757 SPATA8Q6RVD6 105 aa6.81□□□□□ -1.32
PCDHB11-201ENST00000354757 S4R3F8 94 aa6.8□□□□□ -1.32
PCDHB11-201ENST00000354757 A0A1B0GVY2 172 aa6.79□□□□□ -1.32
PCDHB11-201ENST00000354757 RPS29P62273 56 aaKnown RBP6.79□□□□□ -1.32
PCDHB11-201ENST00000354757 A0A1B0GU33 70 aa6.78□□□□□ -1.32
PCDHB11-201ENST00000354757 HUWE1Q7Z6Z7 4374 aaKnown RBP6.78□□□□□ -1.32
PCDHB11-201ENST00000354757 RPL37P61927 97 aaKnown RBP6.69□□□□□ -1.34
PCDHB11-201ENST00000354757 DNAH7Q8WXX0 4024 aa6.68□□□□□ -1.34
PCDHB11-201ENST00000354757 A8MUU9 505 aa6.65□□□□□ -1.35
PCDHB11-201ENST00000354757 R4GN34 69 aa6.65□□□□□ -1.35
PCDHB11-201ENST00000354757 XP32Q5T750 250 aa6.64□□□□□ -1.35
PCDHB11-201ENST00000354757 C20orf166-AS1Q96NR2 134 aa6.63□□□□□ -1.35
PCDHB11-201ENST00000354757 DNAH3Q8TD57 4116 aa6.62□□□□□ -1.35
PCDHB11-201ENST00000354757 CAMK2N1Q7Z7J9 78 aa6.61□□□□□ -1.35
PCDHB11-201ENST00000354757 DNAH9Q9NYC9 4486 aa6.61□□□□□ -1.35
PCDHB11-201ENST00000354757 DNAH10Q8IVF4 4471 aa6.6□□□□□ -1.35
PCDHB11-201ENST00000354757 KRTAP25-1Q3LHN0 102 aa6.58□□□□□ -1.36
PCDHB11-201ENST00000354757 KRTAP16-1A8MUX0 517 aa6.58□□□□□ -1.36
PCDHB11-201ENST00000354757 PRKDCP78527 4128 aaKnown RBP6.58□□□□□ -1.36
PCDHB11-201ENST00000354757 M0QZ58 72 aa6.57□□□□□ -1.36
PCDHB11-201ENST00000354757 KRTAP10-8P60410 259 aa6.57□□□□□ -1.36
PCDHB11-201ENST00000354757 H1FX-AS1Q4G0G2 97 aa6.56□□□□□ -1.36
PCDHB11-201ENST00000354757 PLECQ15149 4684 aaKnown RBP6.54□□□□□ -1.36
PCDHB11-201ENST00000354757 ROMO1P60602 79 aa6.53□□□□□ -1.36
PCDHB11-201ENST00000354757 KRTAP13-3Q3SY46 172 aa6.5□□□□□ -1.37
PCDHB11-201ENST00000354757 H0YAA0 97 aa6.45□□□□□ -1.38
PCDHB11-201ENST00000354757 TPRXLQ17RH7 258 aa6.45□□□□□ -1.38
PCDHB11-201ENST00000354757 KMT2AQ03164 3969 aa6.44□□□□□ -1.38
PCDHB11-201ENST00000354757 STARD9Q9P2P6 4700 aa6.44□□□□□ -1.38
PCDHB11-201ENST00000354757 KRTAP4-5Q9BYR2 181 aa6.43□□□□□ -1.38
PCDHB11-201ENST00000354757 DNAH1Q9P2D7 4330 aa6.43□□□□□ -1.38
PCDHB11-201ENST00000354757 DNAH11Q96DT5 4516 aa6.4□□□□□ -1.38
PCDHB11-201ENST00000354757 NDUFAF8A1L188 74 aa6.38□□□□□ -1.39
PCDHB11-201ENST00000354757 DNAH5Q8TE73 4624 aa6.38□□□□□ -1.39
PCDHB11-201ENST00000354757 KRTAP10-4P60372 401 aaPredicted RBP6.32□□□□□ -1.4
PCDHB11-201ENST00000354757 C10orf95Q9H7T3 257 aa6.32□□□□□ -1.4
PCDHB11-201ENST00000354757 FAT1Q14517 4588 aa6.32□□□□□ -1.4
PCDHB11-201ENST00000354757 MT1HL1P0DM35 61 aa6.31□□□□□ -1.4
PCDHB11-201ENST00000354757 FRAS1Q86XX4 4008 aa6.3□□□□□ -1.4
PCDHB11-201ENST00000354757 DNAH2Q9P225 4427 aa6.26□□□□□ -1.41
PCDHB11-201ENST00000354757 HYDINQ4G0P3 5121 aa6.25□□□□□ -1.41
PCDHB11-201ENST00000354757 VPS13DQ5THJ4 4388 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms