RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 IGKV2-24A0A0C4DH68 120 aa6.22□□□□□ -1.41
SYNE1-203ENST00000354674 PANO1I0J062 215 aa6.22□□□□□ -1.41
SYNE1-203ENST00000354674 CHTF8P0CG12 524 aa6.22□□□□□ -1.41
SYNE1-203ENST00000354674 KCNQ1DNQ9H478 68 aa6.22□□□□□ -1.41
SYNE1-203ENST00000354674 Q9BRP9 147 aa6.22□□□□□ -1.41
SYNE1-203ENST00000354674 ZNF706Q9Y5V0 76 aaPredicted RBP6.22□□□□□ -1.41
SYNE1-203ENST00000354674 FLG2Q5D862 2391 aaPredicted RBP6.22□□□□□ -1.41
SYNE1-203ENST00000354674 RETNLBQ9BQ08 111 aa6.22□□□□□ -1.41
SYNE1-203ENST00000354674 IGLV5-48A0A075B6I7 105 aa6.21□□□□□ -1.41
SYNE1-203ENST00000354674 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.21□□□□□ -1.41
SYNE1-203ENST00000354674 IGLV1-50A0A075B6I6 118 aa6.21□□□□□ -1.42
SYNE1-203ENST00000354674 H0Y9J4 135 aa6.21□□□□□ -1.42
SYNE1-203ENST00000354674 CSAG1Q6PB30 78 aa6.2□□□□□ -1.42
SYNE1-203ENST00000354674 SPRR1AP35321 89 aa6.18□□□□□ -1.42
SYNE1-203ENST00000354674 A0A1B0GVY2 172 aa6.18□□□□□ -1.42
SYNE1-203ENST00000354674 PLAC8Q9NZF1 115 aa6.18□□□□□ -1.42
SYNE1-203ENST00000354674 KRTAP4-16G5E9R7 235 aaPredicted RBP6.17□□□□□ -1.42
SYNE1-203ENST00000354674 Q6ZSA8 131 aa6.17□□□□□ -1.42
SYNE1-203ENST00000354674 SPANXA2-OT1Q8N9U9 137 aa6.16□□□□□ -1.42
SYNE1-203ENST00000354674 RYR3Q15413 4870 aa6.15□□□□□ -1.42
SYNE1-203ENST00000354674 IGFL1Q6UW32 110 aa6.15□□□□□ -1.42
SYNE1-203ENST00000354674 LINC01558Q9Y6Z2 57 aa6.15□□□□□ -1.42
SYNE1-203ENST00000354674 KRTAP10-1P60331 282 aa6.15□□□□□ -1.43
SYNE1-203ENST00000354674 IGLV8-61A0A075B6I0 122 aa6.14□□□□□ -1.43
SYNE1-203ENST00000354674 HRES1P13985 223 aa6.14□□□□□ -1.43
SYNE1-203ENST00000354674 KRTAP11-1Q8IUC1 163 aa6.14□□□□□ -1.43
SYNE1-203ENST00000354674 Q6ZRX8 168 aa6.14□□□□□ -1.43
SYNE1-203ENST00000354674 PRLHP81277 87 aa6.13□□□□□ -1.43
SYNE1-203ENST00000354674 REG3GQ6UW15 175 aa6.13□□□□□ -1.43
SYNE1-203ENST00000354674 PKHD1P08F94 4074 aa6.13□□□□□ -1.43
SYNE1-203ENST00000354674 SPRR4Q96PI1 79 aa6.13□□□□□ -1.43
SYNE1-203ENST00000354674 IGLV7-46A0A075B6I9 117 aa6.12□□□□□ -1.43
SYNE1-203ENST00000354674 LRP1BQ9NZR2 4599 aa6.11□□□□□ -1.43
SYNE1-203ENST00000354674 DYNC1H1Q14204 4646 aaKnown RBP6.11□□□□□ -1.43
SYNE1-203ENST00000354674 KRTAP29-1A8MX34 341 aaPredicted RBP6.1□□□□□ -1.43
SYNE1-203ENST00000354674 CIRBP-AS1Q8TBR5 109 aa6.1□□□□□ -1.43
SYNE1-203ENST00000354674 DHRS4-AS1Q9P1J3 65 aa6.09□□□□□ -1.43
SYNE1-203ENST00000354674 KRTAP13-1Q8IUC0 172 aa6.08□□□□□ -1.44
SYNE1-203ENST00000354674 PLA2G1BP04054 148 aaKnown RBP6.07□□□□□ -1.44
SYNE1-203ENST00000354674 CRIPTQ9P021 101 aa6.06□□□□□ -1.44
SYNE1-203ENST00000354674 PSORS1C2Q9UIG4 136 aa6.06□□□□□ -1.44
SYNE1-203ENST00000354674 APOBP04114 4563 aaKnown RBP6.04□□□□□ -1.44
SYNE1-203ENST00000354674 IGHV6-1A0A0B4J1U7 121 aa6.02□□□□□ -1.45
SYNE1-203ENST00000354674 A8MWP4 228 aa6.01□□□□□ -1.45
SYNE1-203ENST00000354674 A0A1B0GU69 56 aa6.01□□□□□ -1.45
SYNE1-203ENST00000354674 H3BPC8 53 aa6□□□□□ -1.45
SYNE1-203ENST00000354674 MMP24-AS1A0A0U1RRL7 71 aa6□□□□□ -1.45
SYNE1-203ENST00000354674 ZNF861PO60384 105 aa6□□□□□ -1.45
SYNE1-203ENST00000354674 IGLV7-43P04211 117 aa5.99□□□□□ -1.45
SYNE1-203ENST00000354674 A0A1B0GW54 56 aa5.99□□□□□ -1.45
SYNE1-203ENST00000354674 VPS13BQ7Z7G8 4022 aa5.98□□□□□ -1.45
SYNE1-203ENST00000354674 SPRR1BP22528 89 aa5.98□□□□□ -1.45
SYNE1-203ENST00000354674 MIR22HGQ0VDD5 57 aa5.98□□□□□ -1.45
SYNE1-203ENST00000354674 A0A087X002 238 aa5.96□□□□□ -1.46
SYNE1-203ENST00000354674 NOTCH2NLQ7Z3S9 236 aa5.96□□□□□ -1.46
SYNE1-203ENST00000354674 IGLV9-49A0A0B4J1Y8 123 aa5.95□□□□□ -1.46
SYNE1-203ENST00000354674 LINC00483Q53H64 154 aa5.95□□□□□ -1.46
SYNE1-203ENST00000354674 LINC00472Q9H8W2 130 aa5.95□□□□□ -1.46
SYNE1-203ENST00000354674 DMBT1Q9UGM3 2413 aaPredicted RBP5.94□□□□□ -1.46
SYNE1-203ENST00000354674 CDK2AP2O75956 126 aa5.93□□□□□ -1.46
SYNE1-203ENST00000354674 SPINK6Q6UWN8 80 aa5.93□□□□□ -1.46
SYNE1-203ENST00000354674 KRTAP10-4P60372 401 aaPredicted RBP5.93□□□□□ -1.46
SYNE1-203ENST00000354674 EPPK1P58107 5090 aaKnown RBP5.92□□□□□ -1.46
SYNE1-203ENST00000354674 HSPG2P98160 4391 aa5.91□□□□□ -1.46
SYNE1-203ENST00000354674 SPINK1P00995 79 aa5.91□□□□□ -1.46
SYNE1-203ENST00000354674 RYR1P21817 5038 aa5.9□□□□□ -1.46
SYNE1-203ENST00000354674 FAT1Q14517 4588 aa5.9□□□□□ -1.46
SYNE1-203ENST00000354674 SMR3BP02814 79 aaPredicted RBP5.9□□□□□ -1.47
SYNE1-203ENST00000354674 ROMO1P60602 79 aa5.9□□□□□ -1.47
SYNE1-203ENST00000354674 Q5W150 140 aa5.9□□□□□ -1.47
SYNE1-203ENST00000354674 PKHD1L1Q86WI1 4243 aa5.89□□□□□ -1.47
SYNE1-203ENST00000354674 UQCR11O14957 56 aa5.89□□□□□ -1.47
SYNE1-203ENST00000354674 C8orf17Q9NRJ1 99 aa5.88□□□□□ -1.47
SYNE1-203ENST00000354674 SPATA8Q6RVD6 105 aa5.88□□□□□ -1.47
SYNE1-203ENST00000354674 ACYP2P14621 99 aa5.86□□□□□ -1.47
SYNE1-203ENST00000354674 KRTAP1-4P0C5Y4 121 aa5.86□□□□□ -1.47
SYNE1-203ENST00000354674 ANAPC11Q9NYG5 84 aa5.86□□□□□ -1.47
SYNE1-203ENST00000354674 TP53AIP1Q9HCN2 124 aa5.83□□□□□ -1.48
SYNE1-203ENST00000354674 P0C880 135 aa5.83□□□□□ -1.48
SYNE1-203ENST00000354674 FAM229AH3BQW9 127 aa5.82□□□□□ -1.48
SYNE1-203ENST00000354674 KRTAP17-1Q9BYP8 105 aa5.82□□□□□ -1.48
SYNE1-203ENST00000354674 KIAA1109Q2LD37 5005 aa5.82□□□□□ -1.48
SYNE1-203ENST00000354674 MRPL34Q9BQ48 92 aaKnown RBP5.82□□□□□ -1.48
SYNE1-203ENST00000354674 KRTAP13-2Q52LG2 175 aa5.8□□□□□ -1.48
SYNE1-203ENST00000354674 Q5VSD8 79 aa5.8□□□□□ -1.48
SYNE1-203ENST00000354674 SSBP3-AS1Q7Z2R9 100 aa5.79□□□□□ -1.48
SYNE1-203ENST00000354674 A0A0A0MQY5 61 aa5.78□□□□□ -1.48
SYNE1-203ENST00000354674 Q8N1X5 172 aa5.78□□□□□ -1.48
SYNE1-203ENST00000354674 Q96NJ1 140 aa5.78□□□□□ -1.48
SYNE1-203ENST00000354674 A0A1B0GVX0 72 aa5.77□□□□□ -1.49
SYNE1-203ENST00000354674 A8MUU9 505 aa5.77□□□□□ -1.49
SYNE1-203ENST00000354674 KRTAP25-1Q3LHN0 102 aa5.77□□□□□ -1.49
SYNE1-203ENST00000354674 DMAC1Q96GE9 116 aa5.74□□□□□ -1.49
SYNE1-203ENST00000354674 BIRC6Q9NR09 4857 aa5.74□□□□□ -1.49
SYNE1-203ENST00000354674 IGKV2D-30A0A075B6S6 120 aa5.73□□□□□ -1.49
SYNE1-203ENST00000354674 NDUFAF8A1L188 74 aa5.73□□□□□ -1.49
SYNE1-203ENST00000354674 IGKV2-30P06310 120 aa5.73□□□□□ -1.49
SYNE1-203ENST00000354674 ASB16-AS1Q495Z4 193 aa5.73□□□□□ -1.49
SYNE1-203ENST00000354674 SPINT4Q6UDR6 99 aa5.72□□□□□ -1.49
SYNE1-203ENST00000354674 TYMSOSQ8TAI1 123 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 187.2 ms