RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 IGLV8-61A0A075B6I0 122 aa8.33□□□□□ -1.08
TRIM4-201ENST00000349062 SPRR1BP22528 89 aa8.33□□□□□ -1.08
TRIM4-201ENST00000349062 ZNF706Q9Y5V0 76 aaPredicted RBP8.33□□□□□ -1.08
TRIM4-201ENST00000349062 SPAG11AQ6PDA7 123 aa8.31□□□□□ -1.08
TRIM4-201ENST00000349062 DNAH8Q96JB1 4490 aa8.31□□□□□ -1.08
TRIM4-201ENST00000349062 Q8N9P0 234 aaPredicted RBP8.3□□□□□ -1.08
TRIM4-201ENST00000349062 LINC00472Q9H8W2 130 aa8.29□□□□□ -1.08
TRIM4-201ENST00000349062 COA5Q86WW8 74 aa8.28□□□□□ -1.08
TRIM4-201ENST00000349062 A8MWP4 228 aa8.28□□□□□ -1.08
TRIM4-201ENST00000349062 RETNLBQ9BQ08 111 aa8.27□□□□□ -1.09
TRIM4-201ENST00000349062 LIMD2Q9BT23 127 aa8.26□□□□□ -1.09
TRIM4-201ENST00000349062 A0A087X002 238 aa8.25□□□□□ -1.09
TRIM4-201ENST00000349062 KRTAP29-1A8MX34 341 aaPredicted RBP8.25□□□□□ -1.09
TRIM4-201ENST00000349062 LRP1BQ9NZR2 4599 aa8.25□□□□□ -1.09
TRIM4-201ENST00000349062 NOTCH2NLQ7Z3S9 236 aa8.25□□□□□ -1.09
TRIM4-201ENST00000349062 DNAH5Q8TE73 4624 aa8.23□□□□□ -1.09
TRIM4-201ENST00000349062 LINC00483Q53H64 154 aa8.2□□□□□ -1.1
TRIM4-201ENST00000349062 LCA10Q71F78 164 aa8.2□□□□□ -1.1
TRIM4-201ENST00000349062 PKHD1P08F94 4074 aa8.19□□□□□ -1.1
TRIM4-201ENST00000349062 MMP24-AS1A0A0U1RRL7 71 aa8.18□□□□□ -1.1
TRIM4-201ENST00000349062 SPANXA2-OT1Q8N9U9 137 aa8.18□□□□□ -1.1
TRIM4-201ENST00000349062 Q96NJ1 140 aa8.18□□□□□ -1.1
TRIM4-201ENST00000349062 PLA2G1BP04054 148 aaKnown RBP8.18□□□□□ -1.1
TRIM4-201ENST00000349062 C8orf17Q9NRJ1 99 aa8.17□□□□□ -1.1
TRIM4-201ENST00000349062 CD164Q04900 197 aa8.16□□□□□ -1.1
TRIM4-201ENST00000349062 FLG2Q5D862 2391 aaPredicted RBP8.15□□□□□ -1.1
TRIM4-201ENST00000349062 H3BPC8 53 aa8.15□□□□□ -1.1
TRIM4-201ENST00000349062 A0A1B0GVX0 72 aa8.14□□□□□ -1.11
TRIM4-201ENST00000349062 LOC101927531A0A1B0GV80 90 aa8.13□□□□□ -1.11
TRIM4-201ENST00000349062 KRTAP13-2Q52LG2 175 aa8.13□□□□□ -1.11
TRIM4-201ENST00000349062 IGLV7-46A0A075B6I9 117 aa8.12□□□□□ -1.11
TRIM4-201ENST00000349062 C4orf48Q5BLP8 95 aa8.12□□□□□ -1.11
TRIM4-201ENST00000349062 PRR26Q8N8Z3 221 aa8.12□□□□□ -1.11
TRIM4-201ENST00000349062 KTN1-AS1Q86SY8 53 aa8.11□□□□□ -1.11
TRIM4-201ENST00000349062 SPINK7P58062 85 aa8.1□□□□□ -1.11
TRIM4-201ENST00000349062 ATP11AUNQ6ZP68 121 aa8.1□□□□□ -1.11
TRIM4-201ENST00000349062 RBM12B-AS1Q9P1G2 102 aa8.1□□□□□ -1.11
TRIM4-201ENST00000349062 FAT1Q14517 4588 aa8.09□□□□□ -1.11
TRIM4-201ENST00000349062 VPS13BQ7Z7G8 4022 aa8.09□□□□□ -1.11
TRIM4-201ENST00000349062 TYMSOSQ8TAI1 123 aa8.09□□□□□ -1.11
TRIM4-201ENST00000349062 Q75L30 129 aa8.08□□□□□ -1.12
TRIM4-201ENST00000349062 FAT2Q9NYQ8 4349 aa8.08□□□□□ -1.12
TRIM4-201ENST00000349062 DMBT1Q9UGM3 2413 aaPredicted RBP8.08□□□□□ -1.12
TRIM4-201ENST00000349062 ALMS1Q8TCU4 4167 aa8.07□□□□□ -1.12
TRIM4-201ENST00000349062 SACSQ9NZJ4 4579 aa8.07□□□□□ -1.12
TRIM4-201ENST00000349062 Q6ZSA8 131 aa8.07□□□□□ -1.12
TRIM4-201ENST00000349062 MRPL34Q9BQ48 92 aaKnown RBP8.07□□□□□ -1.12
TRIM4-201ENST00000349062 HRES1P13985 223 aa8.06□□□□□ -1.12
TRIM4-201ENST00000349062 PKD1P98161 4303 aa8.06□□□□□ -1.12
TRIM4-201ENST00000349062 SSBP3-AS1Q7Z2R9 100 aa8.05□□□□□ -1.12
TRIM4-201ENST00000349062 TP53AIP1Q9HCN2 124 aa8.04□□□□□ -1.12
TRIM4-201ENST00000349062 CDC42SE1Q9NRR8 79 aa8.04□□□□□ -1.12
TRIM4-201ENST00000349062 KMT2CQ8NEZ4 4911 aaKnown RBP8.04□□□□□ -1.12
TRIM4-201ENST00000349062 KRTAP21-3Q3LHN1 58 aa8.02□□□□□ -1.12
TRIM4-201ENST00000349062 LINC00313P59037 77 aa8.01□□□□□ -1.13
TRIM4-201ENST00000349062 KRTAP1-4P0C5Y4 121 aa8.01□□□□□ -1.13
TRIM4-201ENST00000349062 Q5W150 140 aa8.01□□□□□ -1.13
TRIM4-201ENST00000349062 LINC01558Q9Y6Z2 57 aa7.99□□□□□ -1.13
TRIM4-201ENST00000349062 DYNC1H1Q14204 4646 aaKnown RBP7.99□□□□□ -1.13
TRIM4-201ENST00000349062 A6NN06 94 aa7.98□□□□□ -1.13
TRIM4-201ENST00000349062 PRAC1Q96KF2 57 aa7.98□□□□□ -1.13
TRIM4-201ENST00000349062 C9orf92A6NGG3 77 aa7.96□□□□□ -1.14
TRIM4-201ENST00000349062 IGKV2D-30A0A075B6S6 120 aa7.94□□□□□ -1.14
TRIM4-201ENST00000349062 IGKV2-30P06310 120 aa7.94□□□□□ -1.14
TRIM4-201ENST00000349062 C7orf65Q6ZTY9 151 aa7.94□□□□□ -1.14
TRIM4-201ENST00000349062 LINC00304Q8N9R0 145 aa7.93□□□□□ -1.14
TRIM4-201ENST00000349062 ADM2Q7Z4H4 148 aa7.9□□□□□ -1.14
TRIM4-201ENST00000349062 ACYP2P14621 99 aa7.89□□□□□ -1.15
TRIM4-201ENST00000349062 A0A1B0GU69 56 aa7.87□□□□□ -1.15
TRIM4-201ENST00000349062 ASB16-AS1Q495Z4 193 aa7.85□□□□□ -1.15
TRIM4-201ENST00000349062 SPINK1P00995 79 aa7.84□□□□□ -1.15
TRIM4-201ENST00000349062 C8orf87E5RJ46 101 aa7.83□□□□□ -1.16
TRIM4-201ENST00000349062 A0A1B0GVY2 172 aa7.82□□□□□ -1.16
TRIM4-201ENST00000349062 RYR2Q92736 4967 aa7.82□□□□□ -1.16
TRIM4-201ENST00000349062 APOBP04114 4563 aaKnown RBP7.81□□□□□ -1.16
TRIM4-201ENST00000349062 LRP1Q07954 4544 aaKnown RBP7.79□□□□□ -1.16
TRIM4-201ENST00000349062 FAM229AH3BQW9 127 aa7.78□□□□□ -1.16
TRIM4-201ENST00000349062 Q8N1X5 172 aa7.74□□□□□ -1.17
TRIM4-201ENST00000349062 MIR22HGQ0VDD5 57 aa7.73□□□□□ -1.17
TRIM4-201ENST00000349062 RYR3Q15413 4870 aa7.73□□□□□ -1.17
TRIM4-201ENST00000349062 Q5VSD8 79 aa7.73□□□□□ -1.17
TRIM4-201ENST00000349062 KRTAP16-1A8MUX0 517 aa7.71□□□□□ -1.18
TRIM4-201ENST00000349062 KIAA1109Q2LD37 5005 aa7.71□□□□□ -1.18
TRIM4-201ENST00000349062 MYCBP2O75592 4640 aa7.7□□□□□ -1.18
TRIM4-201ENST00000349062 UQCR11O14957 56 aa7.7□□□□□ -1.18
TRIM4-201ENST00000349062 KRTAP13-3Q3SY46 172 aa7.68□□□□□ -1.18
TRIM4-201ENST00000349062 DMAC1Q96GE9 116 aa7.68□□□□□ -1.18
TRIM4-201ENST00000349062 KRTAP10-4P60372 401 aaPredicted RBP7.66□□□□□ -1.18
TRIM4-201ENST00000349062 LINC01554Q52M75 96 aa7.63□□□□□ -1.19
TRIM4-201ENST00000349062 CSAG1Q6PB30 78 aa7.63□□□□□ -1.19
TRIM4-201ENST00000349062 SPATA8Q6RVD6 105 aa7.6□□□□□ -1.19
TRIM4-201ENST00000349062 KRTAP17-1Q9BYP8 105 aa7.58□□□□□ -1.2
TRIM4-201ENST00000349062 FAT3Q8TDW7 4589 aa7.57□□□□□ -1.2
TRIM4-201ENST00000349062 HSPG2P98160 4391 aa7.53□□□□□ -1.2
TRIM4-201ENST00000349062 EPPK1P58107 5090 aaKnown RBP7.52□□□□□ -1.21
TRIM4-201ENST00000349062 PKHD1L1Q86WI1 4243 aa7.52□□□□□ -1.21
TRIM4-201ENST00000349062 RYR1P21817 5038 aa7.5□□□□□ -1.21
TRIM4-201ENST00000349062 CRIPTQ9P021 101 aa7.5□□□□□ -1.21
TRIM4-201ENST00000349062 H3BS24 57 aa7.48□□□□□ -1.21
TRIM4-201ENST00000349062 RPS29P62273 56 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms