RNA–Protein interactions for RNA: ENST00000344937.11

CLCN2-202, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLCN2, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-202ENST00000344937 KRTAP21-3Q3LHN1 58 aa9.54□□□□□ -0.88
CLCN2-202ENST00000344937 LINC00313P59037 77 aa9.54□□□□□ -0.88
CLCN2-202ENST00000344937 LY6G6CO95867 125 aa9.53□□□□□ -0.88
CLCN2-202ENST00000344937 HECTD4Q9Y4D8 3996 aa9.53□□□□□ -0.88
CLCN2-202ENST00000344937 C14orf177Q52M58 125 aa9.51□□□□□ -0.89
CLCN2-202ENST00000344937 MMP24-AS1A0A0U1RRL7 71 aa9.51□□□□□ -0.89
CLCN2-202ENST00000344937 SPINK6Q6UWN8 80 aa9.5□□□□□ -0.89
CLCN2-202ENST00000344937 H3BS24 57 aa9.5□□□□□ -0.89
CLCN2-202ENST00000344937 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.49□□□□□ -0.89
CLCN2-202ENST00000344937 ADM2Q7Z4H4 148 aa9.48□□□□□ -0.89
CLCN2-202ENST00000344937 Q6ZR54 194 aa9.48□□□□□ -0.89
CLCN2-202ENST00000344937 A0A087WTM6 91 aa9.47□□□□□ -0.89
CLCN2-202ENST00000344937 HYDINQ4G0P3 5121 aa9.45□□□□□ -0.9
CLCN2-202ENST00000344937 A0A087X002 238 aa9.44□□□□□ -0.9
CLCN2-202ENST00000344937 NOTCH2NLQ7Z3S9 236 aa9.44□□□□□ -0.9
CLCN2-202ENST00000344937 CDK2AP2O75956 126 aa9.44□□□□□ -0.9
CLCN2-202ENST00000344937 WWC2-AS2Q96NR7 200 aa9.43□□□□□ -0.9
CLCN2-202ENST00000344937 SPRR1BP22528 89 aa9.42□□□□□ -0.9
CLCN2-202ENST00000344937 FRAS1Q86XX4 4008 aa9.42□□□□□ -0.9
CLCN2-202ENST00000344937 HRES1P13985 223 aa9.42□□□□□ -0.9
CLCN2-202ENST00000344937 DNAH17Q9UFH2 4485 aa9.42□□□□□ -0.9
CLCN2-202ENST00000344937 C1orf134Q5TEV5 83 aa9.41□□□□□ -0.9
CLCN2-202ENST00000344937 LINC01554Q52M75 96 aa9.4□□□□□ -0.9
CLCN2-202ENST00000344937 C8orf17Q9NRJ1 99 aa9.4□□□□□ -0.9
CLCN2-202ENST00000344937 DNAH6Q9C0G6 4158 aa9.4□□□□□ -0.9
CLCN2-202ENST00000344937 Q96NJ1 140 aa9.38□□□□□ -0.91
CLCN2-202ENST00000344937 RTL8CO15255 209 aa9.38□□□□□ -0.91
CLCN2-202ENST00000344937 RETNLBQ9BQ08 111 aa9.38□□□□□ -0.91
CLCN2-202ENST00000344937 PSORS1C2Q9UIG4 136 aa9.34□□□□□ -0.91
CLCN2-202ENST00000344937 PLA2G1BP04054 148 aaKnown RBP9.34□□□□□ -0.91
CLCN2-202ENST00000344937 KRTAP13-1Q8IUC0 172 aa9.34□□□□□ -0.91
CLCN2-202ENST00000344937 CIRBP-AS1Q8TBR5 109 aa9.33□□□□□ -0.92
CLCN2-202ENST00000344937 PRR26Q8N8Z3 221 aa9.33□□□□□ -0.92
CLCN2-202ENST00000344937 SPACA4Q8TDM5 124 aa9.33□□□□□ -0.92
CLCN2-202ENST00000344937 DNAH8Q96JB1 4490 aa9.32□□□□□ -0.92
CLCN2-202ENST00000344937 A0A1B0GVX0 72 aa9.32□□□□□ -0.92
CLCN2-202ENST00000344937 DNAH11Q96DT5 4516 aa9.32□□□□□ -0.92
CLCN2-202ENST00000344937 IGLV5-52A0A0A0MRZ9 124 aa9.32□□□□□ -0.92
CLCN2-202ENST00000344937 ALMS1Q8TCU4 4167 aa9.31□□□□□ -0.92
CLCN2-202ENST00000344937 DNAH5Q8TE73 4624 aa9.3□□□□□ -0.92
CLCN2-202ENST00000344937 MRPL34Q9BQ48 92 aaKnown RBP9.3□□□□□ -0.92
CLCN2-202ENST00000344937 KRTAP10-2P60368 255 aa9.29□□□□□ -0.92
CLCN2-202ENST00000344937 TP53AIP1Q9HCN2 124 aa9.28□□□□□ -0.92
CLCN2-202ENST00000344937 FAT2Q9NYQ8 4349 aa9.27□□□□□ -0.93
CLCN2-202ENST00000344937 Q5W150 140 aa9.27□□□□□ -0.93
CLCN2-202ENST00000344937 SACSQ9NZJ4 4579 aa9.25□□□□□ -0.93
CLCN2-202ENST00000344937 ASB16-AS1Q495Z4 193 aa9.25□□□□□ -0.93
CLCN2-202ENST00000344937 PKD1P98161 4303 aa9.24□□□□□ -0.93
CLCN2-202ENST00000344937 ZNF861PO60384 105 aa9.2□□□□□ -0.94
CLCN2-202ENST00000344937 ZNF706Q9Y5V0 76 aaPredicted RBP9.2□□□□□ -0.94
CLCN2-202ENST00000344937 PKHD1P08F94 4074 aa9.18□□□□□ -0.94
CLCN2-202ENST00000344937 LINC00483Q53H64 154 aa9.17□□□□□ -0.94
CLCN2-202ENST00000344937 CSAG1Q6PB30 78 aa9.14□□□□□ -0.95
CLCN2-202ENST00000344937 LRP1BQ9NZR2 4599 aa9.14□□□□□ -0.95
CLCN2-202ENST00000344937 KRTAP10-1P60331 282 aa9.14□□□□□ -0.95
CLCN2-202ENST00000344937 SPATA8Q6RVD6 105 aa9.13□□□□□ -0.95
CLCN2-202ENST00000344937 KMT2CQ8NEZ4 4911 aaKnown RBP9.11□□□□□ -0.95
CLCN2-202ENST00000344937 A0A1B0GU69 56 aa9.1□□□□□ -0.95
CLCN2-202ENST00000344937 ACYP2P14621 99 aa9.08□□□□□ -0.96
CLCN2-202ENST00000344937 IGLV7-43P04211 117 aa9.08□□□□□ -0.96
CLCN2-202ENST00000344937 MIR22HGQ0VDD5 57 aa9.06□□□□□ -0.96
CLCN2-202ENST00000344937 IGKV2D-30A0A075B6S6 120 aa9.05□□□□□ -0.96
CLCN2-202ENST00000344937 IGKV2-30P06310 120 aa9.05□□□□□ -0.96
CLCN2-202ENST00000344937 VPS13BQ7Z7G8 4022 aa9.04□□□□□ -0.96
CLCN2-202ENST00000344937 Q6ZSA8 131 aa9.02□□□□□ -0.97
CLCN2-202ENST00000344937 UQCR11O14957 56 aa9.01□□□□□ -0.97
CLCN2-202ENST00000344937 KRTAP13-3Q3SY46 172 aa9□□□□□ -0.97
CLCN2-202ENST00000344937 RYR2Q92736 4967 aa9□□□□□ -0.97
CLCN2-202ENST00000344937 SPINK1P00995 79 aa8.99□□□□□ -0.97
CLCN2-202ENST00000344937 DMAC1Q96GE9 116 aa8.99□□□□□ -0.97
CLCN2-202ENST00000344937 DYNC1H1Q14204 4646 aaKnown RBP8.98□□□□□ -0.97
CLCN2-202ENST00000344937 FAM229AH3BQW9 127 aa8.92□□□□□ -0.98
CLCN2-202ENST00000344937 KRTAP13-2Q52LG2 175 aa8.91□□□□□ -0.98
CLCN2-202ENST00000344937 SSBP3-AS1Q7Z2R9 100 aa8.9□□□□□ -0.98
CLCN2-202ENST00000344937 FAT1Q14517 4588 aa8.89□□□□□ -0.99
CLCN2-202ENST00000344937 SMR3BP02814 79 aaPredicted RBP8.89□□□□□ -0.99
CLCN2-202ENST00000344937 Q8N1X5 172 aa8.87□□□□□ -0.99
CLCN2-202ENST00000344937 A0A1B0GVY2 172 aa8.86□□□□□ -0.99
CLCN2-202ENST00000344937 RYR3Q15413 4870 aa8.85□□□□□ -0.99
CLCN2-202ENST00000344937 APOBP04114 4563 aaKnown RBP8.84□□□□□ -0.99
CLCN2-202ENST00000344937 ROMO1P60602 79 aa8.81□□□□□ -1
CLCN2-202ENST00000344937 KRTAP1-4P0C5Y4 121 aa8.77□□□□□ -1
CLCN2-202ENST00000344937 FLG2Q5D862 2391 aaPredicted RBP8.77□□□□□ -1.01
CLCN2-202ENST00000344937 KRTAP25-1Q3LHN0 102 aa8.76□□□□□ -1.01
CLCN2-202ENST00000344937 KRTAP16-1A8MUX0 517 aa8.76□□□□□ -1.01
CLCN2-202ENST00000344937 TYMSOSQ8TAI1 123 aa8.74□□□□□ -1.01
CLCN2-202ENST00000344937 C9orf92A6NGG3 77 aa8.7□□□□□ -1.02
CLCN2-202ENST00000344937 A8MUU9 505 aa8.69□□□□□ -1.02
CLCN2-202ENST00000344937 LINC00304Q8N9R0 145 aa8.66□□□□□ -1.02
CLCN2-202ENST00000344937 DMBT1Q9UGM3 2413 aaPredicted RBP8.65□□□□□ -1.02
CLCN2-202ENST00000344937 KRTAP10-4P60372 401 aaPredicted RBP8.64□□□□□ -1.03
CLCN2-202ENST00000344937 H0YAA0 97 aa8.63□□□□□ -1.03
CLCN2-202ENST00000344937 P0C880 135 aa8.63□□□□□ -1.03
CLCN2-202ENST00000344937 HSPG2P98160 4391 aa8.61□□□□□ -1.03
CLCN2-202ENST00000344937 CRIPTQ9P021 101 aa8.59□□□□□ -1.04
CLCN2-202ENST00000344937 LRP1Q07954 4544 aaKnown RBP8.57□□□□□ -1.04
CLCN2-202ENST00000344937 KIAA1109Q2LD37 5005 aa8.55□□□□□ -1.04
CLCN2-202ENST00000344937 EPPK1P58107 5090 aaKnown RBP8.54□□□□□ -1.04
CLCN2-202ENST00000344937 PKHD1L1Q86WI1 4243 aa8.54□□□□□ -1.04
CLCN2-202ENST00000344937 RYR1P21817 5038 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms