RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 LOC110117498A0A087WWA1 95 aa9.58□□□□□ -0.88
USF2-202ENST00000343550 F8W1H4 67 aa9.58□□□□□ -0.88
USF2-202ENST00000343550 MT1HP80294 61 aa9.58□□□□□ -0.88
USF2-202ENST00000343550 SIGMAR1Q99720 223 aa9.57□□□□□ -0.88
USF2-202ENST00000343550 Q75L30 129 aa9.56□□□□□ -0.88
USF2-202ENST00000343550 PDE6GP18545 87 aa9.56□□□□□ -0.88
USF2-202ENST00000343550 C21orf62-AS1Q17RA5 79 aa9.56□□□□□ -0.88
USF2-202ENST00000343550 C14orf132Q9NPU4 83 aa9.56□□□□□ -0.88
USF2-202ENST00000343550 H3BT86 120 aa9.54□□□□□ -0.88
USF2-202ENST00000343550 PRO0461Q9UI25 63 aa9.54□□□□□ -0.88
USF2-202ENST00000343550 A0A1B0GW54 56 aa9.53□□□□□ -0.88
USF2-202ENST00000343550 DSCR10P59022 87 aa9.53□□□□□ -0.88
USF2-202ENST00000343550 MTURNQ8N3F0 131 aa9.53□□□□□ -0.88
USF2-202ENST00000343550 CRCT1Q9UGL9 99 aa9.52□□□□□ -0.88
USF2-202ENST00000343550 LINC00313P59037 77 aa9.51□□□□□ -0.89
USF2-202ENST00000343550 C20orf166-AS1Q96NR2 134 aa9.51□□□□□ -0.89
USF2-202ENST00000343550 ATP11AUNQ6ZP68 121 aa9.51□□□□□ -0.89
USF2-202ENST00000343550 A8MUU9 505 aa9.49□□□□□ -0.89
USF2-202ENST00000343550 NOTCH2NLQ7Z3S9 236 aa9.49□□□□□ -0.89
USF2-202ENST00000343550 IGHV6-1A0A0B4J1U7 121 aa9.46□□□□□ -0.89
USF2-202ENST00000343550 KRTAP16-1A8MUX0 517 aa9.46□□□□□ -0.9
USF2-202ENST00000343550 J3KT08 172 aa9.46□□□□□ -0.9
USF2-202ENST00000343550 K7ERU9 68 aa9.45□□□□□ -0.9
USF2-202ENST00000343550 A0A1B0GVX0 72 aa9.44□□□□□ -0.9
USF2-202ENST00000343550 LORP23490 312 aaPredicted RBP9.43□□□□□ -0.9
USF2-202ENST00000343550 KRTAP10-6P60371 365 aaPredicted RBP9.42□□□□□ -0.9
USF2-202ENST00000343550 ETDBQ3ZM63 59 aa9.42□□□□□ -0.9
USF2-202ENST00000343550 C8orf87E5RJ46 101 aa9.4□□□□□ -0.91
USF2-202ENST00000343550 NREPQ16612 68 aa9.4□□□□□ -0.91
USF2-202ENST00000343550 J3QR89 54 aa9.39□□□□□ -0.91
USF2-202ENST00000343550 M0R2T5 61 aa9.39□□□□□ -0.91
USF2-202ENST00000343550 COX6B2Q6YFQ2 88 aa9.39□□□□□ -0.91
USF2-202ENST00000343550 NDUFB1O75438 58 aa9.37□□□□□ -0.91
USF2-202ENST00000343550 A8MWP4 228 aa9.36□□□□□ -0.91
USF2-202ENST00000343550 IGKV3D-7A0A0C4DH55 119 aa9.33□□□□□ -0.92
USF2-202ENST00000343550 C8orf17Q9NRJ1 99 aa9.3□□□□□ -0.92
USF2-202ENST00000343550 FLGP20930 4061 aaPredicted RBP9.3□□□□□ -0.92
USF2-202ENST00000343550 PRR15Q8IV56 129 aa9.29□□□□□ -0.92
USF2-202ENST00000343550 Q8N9P0 234 aaPredicted RBP9.26□□□□□ -0.93
USF2-202ENST00000343550 Q6ZVQ6 151 aa9.25□□□□□ -0.93
USF2-202ENST00000343550 BPY2O14599 106 aa9.23□□□□□ -0.93
USF2-202ENST00000343550 K7EQZ3 153 aa9.21□□□□□ -0.93
USF2-202ENST00000343550 LINC00846Q9NV44 126 aa9.21□□□□□ -0.94
USF2-202ENST00000343550 MMP24-AS1A0A0U1RRL7 71 aa9.2□□□□□ -0.94
USF2-202ENST00000343550 ZCCHC13Q8WW36 166 aaKnown RBP9.2□□□□□ -0.94
USF2-202ENST00000343550 FAM240AA0A1B0GVK7 77 aa9.17□□□□□ -0.94
USF2-202ENST00000343550 TMEM254Q8TBM7 123 aa9.15□□□□□ -0.94
USF2-202ENST00000343550 MRPL34Q9BQ48 92 aaKnown RBP9.15□□□□□ -0.94
USF2-202ENST00000343550 UBL5Q9BZL1 73 aa9.15□□□□□ -0.94
USF2-202ENST00000343550 hDV103S1A0JD37 113 aa9.15□□□□□ -0.95
USF2-202ENST00000343550 ACYP1P07311 99 aa9.14□□□□□ -0.95
USF2-202ENST00000343550 Q8N9L7 120 aa9.13□□□□□ -0.95
USF2-202ENST00000343550 HRES1P13985 223 aa9.12□□□□□ -0.95
USF2-202ENST00000343550 MPLKIPQ8TAP9 179 aa9.1□□□□□ -0.95
USF2-202ENST00000343550 SPINK7P58062 85 aa9.09□□□□□ -0.95
USF2-202ENST00000343550 NDUFS5O43920 106 aa9.05□□□□□ -0.96
USF2-202ENST00000343550 WFDC13Q8IUB5 93 aa9.05□□□□□ -0.96
USF2-202ENST00000343550 RBM12B-AS1Q9P1G2 102 aa9.05□□□□□ -0.96
USF2-202ENST00000343550 CASC2Q6XLA1 102 aa9.05□□□□□ -0.96
USF2-202ENST00000343550 KRTAP9-8Q9BYQ0 159 aa9.04□□□□□ -0.96
USF2-202ENST00000343550 FAM236DA0A1B0GTK5 79 aa9.01□□□□□ -0.97
USF2-202ENST00000343550 FAM236CP0DP71 79 aa9.01□□□□□ -0.97
USF2-202ENST00000343550 MT-ATP8P03928 68 aa8.99□□□□□ -0.97
USF2-202ENST00000343550 CXCL6P80162 114 aa8.99□□□□□ -0.97
USF2-202ENST00000343550 SCGB1A1P11684 91 aa8.98□□□□□ -0.97
USF2-202ENST00000343550 PCP4P48539 62 aa8.98□□□□□ -0.97
USF2-202ENST00000343550 Q5W150 140 aa8.98□□□□□ -0.97
USF2-202ENST00000343550 HCG22E2RYF7 251 aa8.97□□□□□ -0.97
USF2-202ENST00000343550 LINC00643Q86TS7 51 aa8.97□□□□□ -0.97
USF2-202ENST00000343550 IMUPQ9GZP8 106 aa8.9□□□□□ -0.99
USF2-202ENST00000343550 USH2AO75445 5202 aa8.88□□□□□ -0.99
USF2-202ENST00000343550 IGKV2D-30A0A075B6S6 120 aa8.87□□□□□ -0.99
USF2-202ENST00000343550 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.87□□□□□ -0.99
USF2-202ENST00000343550 MT2AP02795 61 aa8.87□□□□□ -0.99
USF2-202ENST00000343550 IGKV2-30P06310 120 aa8.87□□□□□ -0.99
USF2-202ENST00000343550 ATP5EP2Q5VTU8 51 aa8.86□□□□□ -0.99
USF2-202ENST00000343550 C7orf65Q6ZTY9 151 aa8.85□□□□□ -0.99
USF2-202ENST00000343550 SSPOA2VEC9 5147 aa8.84□□□□□ -0.99
USF2-202ENST00000343550 KRTAP9-7A8MTY7 169 aa8.83□□□□□ -1
USF2-202ENST00000343550 TP53AIP1Q9HCN2 124 aa8.81□□□□□ -1
USF2-202ENST00000343550 MT1FP04733 61 aa8.8□□□□□ -1
USF2-202ENST00000343550 KRTAP10-10P60014 251 aa8.76□□□□□ -1.01
USF2-202ENST00000343550 KRTAP9-3Q9BYQ3 159 aa8.75□□□□□ -1.01
USF2-202ENST00000343550 HIST1H4AP62805 103 aaKnown RBP8.75□□□□□ -1.01
USF2-202ENST00000343550 H1FX-AS1Q4G0G2 97 aa8.75□□□□□ -1.01
USF2-202ENST00000343550 C4orf26Q17RF5 130 aa8.72□□□□□ -1.01
USF2-202ENST00000343550 FCGBPQ9Y6R7 5405 aaPredicted RBP8.71□□□□□ -1.01
USF2-202ENST00000343550 KRTAP19-1Q8IUB9 90 aa8.7□□□□□ -1.02
USF2-202ENST00000343550 FAM236AA0A1B0GUQ0 79 aa8.7□□□□□ -1.02
USF2-202ENST00000343550 FAM236BA0A1B0GV22 79 aa8.7□□□□□ -1.02
USF2-202ENST00000343550 ANAPC13Q9BS18 74 aa8.68□□□□□ -1.02
USF2-202ENST00000343550 A0A087WVE0 104 aa8.65□□□□□ -1.02
USF2-202ENST00000343550 ATOX1O00244 68 aa8.64□□□□□ -1.03
USF2-202ENST00000343550 TRAV22A0A0B4J277 110 aa8.62□□□□□ -1.03
USF2-202ENST00000343550 KRTAP3-1Q9BYR8 98 aa8.62□□□□□ -1.03
USF2-202ENST00000343550 CYP4F30PQ9H0H9 118 aa8.61□□□□□ -1.03
USF2-202ENST00000343550 UQCRQO14949 82 aa8.6□□□□□ -1.03
USF2-202ENST00000343550 C1orf64Q8NEQ6 169 aa8.59□□□□□ -1.03
USF2-202ENST00000343550 LOC101927531A0A1B0GV80 90 aa8.56□□□□□ -1.04
USF2-202ENST00000343550 MACF1Q9UPN3 7388 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms