RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.84□□□□□ -0.99
CLCN1-201ENST00000343257 KRTAP13-1Q8IUC0 172 aa8.83□□□□□ -1
CLCN1-201ENST00000343257 KRTAP24-1Q3LI83 254 aa8.82□□□□□ -1
CLCN1-201ENST00000343257 ACYP2P14621 99 aa8.81□□□□□ -1
CLCN1-201ENST00000343257 A0A1B0GU69 56 aa8.8□□□□□ -1
CLCN1-201ENST00000343257 C14orf177Q52M58 125 aa8.8□□□□□ -1
CLCN1-201ENST00000343257 WWC2-AS2Q96NR7 200 aa8.78□□□□□ -1
CLCN1-201ENST00000343257 FRAS1Q86XX4 4008 aa8.78□□□□□ -1
CLCN1-201ENST00000343257 CIRBP-AS1Q8TBR5 109 aa8.78□□□□□ -1
CLCN1-201ENST00000343257 DNAH7Q8WXX0 4024 aa8.78□□□□□ -1
CLCN1-201ENST00000343257 C4orf48Q5BLP8 95 aa8.75□□□□□ -1.01
CLCN1-201ENST00000343257 PSORS1C2Q9UIG4 136 aa8.74□□□□□ -1.01
CLCN1-201ENST00000343257 LINC01554Q52M75 96 aa8.72□□□□□ -1.01
CLCN1-201ENST00000343257 MIR22HGQ0VDD5 57 aa8.7□□□□□ -1.02
CLCN1-201ENST00000343257 LINC00483Q53H64 154 aa8.7□□□□□ -1.02
CLCN1-201ENST00000343257 KRTAP13-3Q3SY46 172 aa8.69□□□□□ -1.02
CLCN1-201ENST00000343257 PLA2G1BP04054 148 aaKnown RBP8.69□□□□□ -1.02
CLCN1-201ENST00000343257 DNAH3Q8TD57 4116 aa8.69□□□□□ -1.02
CLCN1-201ENST00000343257 APLNQ9ULZ1 77 aa8.69□□□□□ -1.02
CLCN1-201ENST00000343257 SPACA4Q8TDM5 124 aa8.68□□□□□ -1.02
CLCN1-201ENST00000343257 ALMS1Q8TCU4 4167 aa8.68□□□□□ -1.02
CLCN1-201ENST00000343257 DNAH8Q96JB1 4490 aa8.67□□□□□ -1.02
CLCN1-201ENST00000343257 ZNF706Q9Y5V0 76 aaPredicted RBP8.67□□□□□ -1.02
CLCN1-201ENST00000343257 DMAC1Q96GE9 116 aa8.67□□□□□ -1.02
CLCN1-201ENST00000343257 CSAG1Q6PB30 78 aa8.66□□□□□ -1.02
CLCN1-201ENST00000343257 NBDYA0A0U1RRE5 68 aa8.65□□□□□ -1.02
CLCN1-201ENST00000343257 SPINK1P00995 79 aa8.65□□□□□ -1.03
CLCN1-201ENST00000343257 IGKV2D-30A0A075B6S6 120 aa8.64□□□□□ -1.03
CLCN1-201ENST00000343257 IGKV2-30P06310 120 aa8.64□□□□□ -1.03
CLCN1-201ENST00000343257 SPATA8Q6RVD6 105 aa8.64□□□□□ -1.03
CLCN1-201ENST00000343257 H3BS24 57 aa8.64□□□□□ -1.03
CLCN1-201ENST00000343257 RTL8CO15255 209 aa8.63□□□□□ -1.03
CLCN1-201ENST00000343257 PLECQ15149 4684 aaKnown RBP8.63□□□□□ -1.03
CLCN1-201ENST00000343257 IGLV5-52A0A0A0MRZ9 124 aa8.63□□□□□ -1.03
CLCN1-201ENST00000343257 UQCR11O14957 56 aa8.63□□□□□ -1.03
CLCN1-201ENST00000343257 ZNF861PO60384 105 aa8.63□□□□□ -1.03
CLCN1-201ENST00000343257 TGP01266 2768 aa8.59□□□□□ -1.03
CLCN1-201ENST00000343257 Q6ZRN7 208 aaPredicted RBP8.59□□□□□ -1.03
CLCN1-201ENST00000343257 FAM229AH3BQW9 127 aa8.55□□□□□ -1.04
CLCN1-201ENST00000343257 A0A087WTM6 91 aa8.54□□□□□ -1.04
CLCN1-201ENST00000343257 FBN3Q75N90 2809 aa8.53□□□□□ -1.04
CLCN1-201ENST00000343257 MEGF8Q7Z7M0 2845 aa8.51□□□□□ -1.05
CLCN1-201ENST00000343257 DNAH17Q9UFH2 4485 aa8.51□□□□□ -1.05
CLCN1-201ENST00000343257 Q8N1X5 172 aa8.49□□□□□ -1.05
CLCN1-201ENST00000343257 FLG2Q5D862 2391 aaPredicted RBP8.49□□□□□ -1.05
CLCN1-201ENST00000343257 HECTD4Q9Y4D8 3996 aa8.48□□□□□ -1.05
CLCN1-201ENST00000343257 IGLV7-43P04211 117 aa8.48□□□□□ -1.05
CLCN1-201ENST00000343257 KMT2AQ03164 3969 aa8.41□□□□□ -1.06
CLCN1-201ENST00000343257 STARD9Q9P2P6 4700 aa8.4□□□□□ -1.06
CLCN1-201ENST00000343257 SSBP3-AS1Q7Z2R9 100 aa8.4□□□□□ -1.07
CLCN1-201ENST00000343257 CRIPTQ9P021 101 aa8.4□□□□□ -1.07
CLCN1-201ENST00000343257 C1orf134Q5TEV5 83 aa8.37□□□□□ -1.07
CLCN1-201ENST00000343257 KRTAP16-1A8MUX0 517 aa8.37□□□□□ -1.07
CLCN1-201ENST00000343257 KRTAP13-2Q52LG2 175 aa8.37□□□□□ -1.07
CLCN1-201ENST00000343257 VPS13DQ5THJ4 4388 aa8.35□□□□□ -1.07
CLCN1-201ENST00000343257 DNAH2Q9P225 4427 aa8.35□□□□□ -1.07
CLCN1-201ENST00000343257 NUPR2A6NF83 97 aa8.34□□□□□ -1.07
CLCN1-201ENST00000343257 DYNC2H1Q8NCM8 4307 aaKnown RBP8.32□□□□□ -1.08
CLCN1-201ENST00000343257 Q6ZSA8 131 aa8.3□□□□□ -1.08
CLCN1-201ENST00000343257 DNAH6Q9C0G6 4158 aa8.3□□□□□ -1.08
CLCN1-201ENST00000343257 H0YAA0 97 aa8.3□□□□□ -1.08
CLCN1-201ENST00000343257 TYMSOSQ8TAI1 123 aa8.3□□□□□ -1.08
CLCN1-201ENST00000343257 DNAH11Q96DT5 4516 aa8.28□□□□□ -1.08
CLCN1-201ENST00000343257 LINC00304Q8N9R0 145 aa8.26□□□□□ -1.09
CLCN1-201ENST00000343257 A8MUU9 505 aa8.24□□□□□ -1.09
CLCN1-201ENST00000343257 KRTAP25-1Q3LHN0 102 aa8.24□□□□□ -1.09
CLCN1-201ENST00000343257 KRTAP10-2P60368 255 aa8.23□□□□□ -1.09
CLCN1-201ENST00000343257 LY6G6CO95867 125 aa8.22□□□□□ -1.09
CLCN1-201ENST00000343257 LRP1BQ9NZR2 4599 aa8.2□□□□□ -1.1
CLCN1-201ENST00000343257 A0A1B0GU33 70 aa8.2□□□□□ -1.1
CLCN1-201ENST00000343257 ROMO1P60602 79 aa8.17□□□□□ -1.1
CLCN1-201ENST00000343257 DMBT1Q9UGM3 2413 aaPredicted RBP8.17□□□□□ -1.1
CLCN1-201ENST00000343257 C9orf92A6NGG3 77 aa8.16□□□□□ -1.1
CLCN1-201ENST00000343257 DNAH5Q8TE73 4624 aa8.14□□□□□ -1.11
CLCN1-201ENST00000343257 KRTAP1-4P0C5Y4 121 aa8.12□□□□□ -1.11
CLCN1-201ENST00000343257 H1FX-AS1Q4G0G2 97 aa8.1□□□□□ -1.11
CLCN1-201ENST00000343257 PRKDCP78527 4128 aaKnown RBP8.1□□□□□ -1.11
CLCN1-201ENST00000343257 KRTAP10-1P60331 282 aa8.09□□□□□ -1.11
CLCN1-201ENST00000343257 KRTAP3-1Q9BYR8 98 aa8.06□□□□□ -1.12
CLCN1-201ENST00000343257 VPS13BQ7Z7G8 4022 aa8.05□□□□□ -1.12
CLCN1-201ENST00000343257 P0C880 135 aa8.02□□□□□ -1.13
CLCN1-201ENST00000343257 K7ERS5 55 aa8.01□□□□□ -1.13
CLCN1-201ENST00000343257 A0A0D9SG42 100 aa7.99□□□□□ -1.13
CLCN1-201ENST00000343257 COX6B2Q6YFQ2 88 aa7.99□□□□□ -1.13
CLCN1-201ENST00000343257 FAT2Q9NYQ8 4349 aa7.95□□□□□ -1.14
CLCN1-201ENST00000343257 SPINT4Q6UDR6 99 aa7.94□□□□□ -1.14
CLCN1-201ENST00000343257 C10orf95Q9H7T3 257 aa7.9□□□□□ -1.14
CLCN1-201ENST00000343257 SMR3BP02814 79 aaPredicted RBP7.9□□□□□ -1.14
CLCN1-201ENST00000343257 HYDINQ4G0P3 5121 aa7.89□□□□□ -1.15
CLCN1-201ENST00000343257 TPRXLQ17RH7 258 aa7.84□□□□□ -1.15
CLCN1-201ENST00000343257 PKD1P98161 4303 aa7.84□□□□□ -1.15
CLCN1-201ENST00000343257 KRTAP13-4Q3LI77 160 aa7.82□□□□□ -1.16
CLCN1-201ENST00000343257 C20orf166-AS1Q96NR2 134 aa7.81□□□□□ -1.16
CLCN1-201ENST00000343257 RPL37P61927 97 aaKnown RBP7.81□□□□□ -1.16
CLCN1-201ENST00000343257 NDUFAF8A1L188 74 aa7.76□□□□□ -1.17
CLCN1-201ENST00000343257 FAT1Q14517 4588 aa7.74□□□□□ -1.17
CLCN1-201ENST00000343257 PKHD1P08F94 4074 aa7.73□□□□□ -1.17
CLCN1-201ENST00000343257 KRTAP10-6P60371 365 aaPredicted RBP7.73□□□□□ -1.17
CLCN1-201ENST00000343257 DNHD1Q96M86 4753 aa7.68□□□□□ -1.18
CLCN1-201ENST00000343257 KRTAP3-3Q9BYR6 98 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms