RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 KRTAP29-1A8MX34 341 aaPredicted RBP9.83□□□□□ -0.84
RDX-201ENST00000343115 ZCCHC13Q8WW36 166 aaKnown RBP9.8□□□□□ -0.84
RDX-201ENST00000343115 K7ERS5 55 aa9.8□□□□□ -0.84
RDX-201ENST00000343115 A0A087X002 238 aa9.78□□□□□ -0.84
RDX-201ENST00000343115 NOTCH2NLQ7Z3S9 236 aa9.78□□□□□ -0.84
RDX-201ENST00000343115 LINC00304Q8N9R0 145 aa9.78□□□□□ -0.84
RDX-201ENST00000343115 Q8N1X5 172 aa9.78□□□□□ -0.84
RDX-201ENST00000343115 SRRM2Q9UQ35 2752 aaKnown RBP9.78□□□□□ -0.84
RDX-201ENST00000343115 KRTAP10-2P60368 255 aa9.77□□□□□ -0.85
RDX-201ENST00000343115 HRES1P13985 223 aa9.76□□□□□ -0.85
RDX-201ENST00000343115 Q6ZRN7 208 aaPredicted RBP9.75□□□□□ -0.85
RDX-201ENST00000343115 Q5VV11 94 aa9.73□□□□□ -0.85
RDX-201ENST00000343115 UQCR11O14957 56 aa9.68□□□□□ -0.86
RDX-201ENST00000343115 KRTAP10-1P60331 282 aa9.67□□□□□ -0.86
RDX-201ENST00000343115 LINC00483Q53H64 154 aa9.67□□□□□ -0.86
RDX-201ENST00000343115 Q6ZR54 194 aa9.66□□□□□ -0.86
RDX-201ENST00000343115 AKAP9Q99996 3911 aa9.66□□□□□ -0.86
RDX-201ENST00000343115 LCE6AA0A183 80 aa9.65□□□□□ -0.87
RDX-201ENST00000343115 Q5W150 140 aa9.65□□□□□ -0.87
RDX-201ENST00000343115 CDC42SE1Q9NRR8 79 aa9.65□□□□□ -0.87
RDX-201ENST00000343115 MIR22HGQ0VDD5 57 aa9.64□□□□□ -0.87
RDX-201ENST00000343115 KRTAP13-1Q8IUC0 172 aa9.62□□□□□ -0.87
RDX-201ENST00000343115 SPINK7P58062 85 aa9.62□□□□□ -0.87
RDX-201ENST00000343115 FLG2Q5D862 2391 aaPredicted RBP9.61□□□□□ -0.87
RDX-201ENST00000343115 Q75L30 129 aa9.61□□□□□ -0.87
RDX-201ENST00000343115 LINC01558Q9Y6Z2 57 aa9.6□□□□□ -0.87
RDX-201ENST00000343115 KTN1-AS1Q86SY8 53 aa9.58□□□□□ -0.88
RDX-201ENST00000343115 A8MU10 97 aa9.57□□□□□ -0.88
RDX-201ENST00000343115 FBN3Q75N90 2809 aa9.54□□□□□ -0.88
RDX-201ENST00000343115 LCA10Q71F78 164 aa9.46□□□□□ -0.89
RDX-201ENST00000343115 COL7A1Q02388 2944 aa9.45□□□□□ -0.9
RDX-201ENST00000343115 KRTAP13-2Q52LG2 175 aa9.43□□□□□ -0.9
RDX-201ENST00000343115 PRAC1Q96KF2 57 aa9.43□□□□□ -0.9
RDX-201ENST00000343115 DMAC1Q96GE9 116 aa9.4□□□□□ -0.91
RDX-201ENST00000343115 RBM12B-AS1Q9P1G2 102 aa9.37□□□□□ -0.91
RDX-201ENST00000343115 CSMD3Q7Z407 3707 aa9.36□□□□□ -0.91
RDX-201ENST00000343115 A0A0D9SG42 100 aa9.35□□□□□ -0.91
RDX-201ENST00000343115 MEGF8Q7Z7M0 2845 aa9.34□□□□□ -0.91
RDX-201ENST00000343115 A0A1B0GU33 70 aa9.29□□□□□ -0.92
RDX-201ENST00000343115 ASB16-AS1Q495Z4 193 aa9.24□□□□□ -0.93
RDX-201ENST00000343115 KRTAP21-3Q3LHN1 58 aa9.23□□□□□ -0.93
RDX-201ENST00000343115 CRIPTQ9P021 101 aa9.16□□□□□ -0.94
RDX-201ENST00000343115 LINC01554Q52M75 96 aa9.13□□□□□ -0.95
RDX-201ENST00000343115 CSAG1Q6PB30 78 aa9.13□□□□□ -0.95
RDX-201ENST00000343115 SPINT4Q6UDR6 99 aa9.13□□□□□ -0.95
RDX-201ENST00000343115 J3QL48 77 aa9.11□□□□□ -0.95
RDX-201ENST00000343115 A6NN06 94 aa9.11□□□□□ -0.95
RDX-201ENST00000343115 KRTAP1-4P0C5Y4 121 aa9.11□□□□□ -0.95
RDX-201ENST00000343115 ADM2Q7Z4H4 148 aa9.09□□□□□ -0.95
RDX-201ENST00000343115 SPATA8Q6RVD6 105 aa9.09□□□□□ -0.95
RDX-201ENST00000343115 Q5VSD8 79 aa9.09□□□□□ -0.95
RDX-201ENST00000343115 Q6ZSA8 131 aa9.08□□□□□ -0.96
RDX-201ENST00000343115 HUWE1Q7Z6Z7 4374 aaKnown RBP9.06□□□□□ -0.96
RDX-201ENST00000343115 COX6B2Q6YFQ2 88 aa9□□□□□ -0.97
RDX-201ENST00000343115 DNHD1Q96M86 4753 aa8.97□□□□□ -0.97
RDX-201ENST00000343115 H1FX-AS1Q4G0G2 97 aa8.97□□□□□ -0.97
RDX-201ENST00000343115 S4R3F8 94 aa8.96□□□□□ -0.97
RDX-201ENST00000343115 KRTAP16-1A8MUX0 517 aa8.93□□□□□ -0.98
RDX-201ENST00000343115 RPS29P62273 56 aaKnown RBP8.9□□□□□ -0.98
RDX-201ENST00000343115 KRTAP13-3Q3SY46 172 aa8.9□□□□□ -0.99
RDX-201ENST00000343115 DNAH9Q9NYC9 4486 aa8.86□□□□□ -0.99
RDX-201ENST00000343115 A8MUU9 505 aa8.84□□□□□ -0.99
RDX-201ENST00000343115 RPL37P61927 97 aaKnown RBP8.84□□□□□ -0.99
RDX-201ENST00000343115 C20orf166-AS1Q96NR2 134 aa8.81□□□□□ -1
RDX-201ENST00000343115 ANK2Q01484 3957 aa8.8□□□□□ -1
RDX-201ENST00000343115 PLECQ15149 4684 aaKnown RBP8.75□□□□□ -1.01
RDX-201ENST00000343115 DNAH10Q8IVF4 4471 aa8.74□□□□□ -1.01
RDX-201ENST00000343115 PRKDCP78527 4128 aaKnown RBP8.73□□□□□ -1.01
RDX-201ENST00000343115 ROMO1P60602 79 aa8.72□□□□□ -1.01
RDX-201ENST00000343115 R4GN34 69 aa8.7□□□□□ -1.02
RDX-201ENST00000343115 H0YAA0 97 aa8.66□□□□□ -1.02
RDX-201ENST00000343115 M0QZ58 72 aa8.64□□□□□ -1.03
RDX-201ENST00000343115 CAMK2N1Q7Z7J9 78 aa8.63□□□□□ -1.03
RDX-201ENST00000343115 A0A1B0GVY2 172 aa8.61□□□□□ -1.03
RDX-201ENST00000343115 STARD9Q9P2P6 4700 aa8.61□□□□□ -1.03
RDX-201ENST00000343115 KRTAP25-1Q3LHN0 102 aa8.6□□□□□ -1.03
RDX-201ENST00000343115 H3BS24 57 aa8.59□□□□□ -1.03
RDX-201ENST00000343115 XP32Q5T750 250 aa8.58□□□□□ -1.04
RDX-201ENST00000343115 SEC61BP60468 96 aaKnown RBP8.57□□□□□ -1.04
RDX-201ENST00000343115 LYSTQ99698 3801 aa8.49□□□□□ -1.05
RDX-201ENST00000343115 DNAH1Q9P2D7 4330 aa8.49□□□□□ -1.05
RDX-201ENST00000343115 DNAH11Q96DT5 4516 aa8.48□□□□□ -1.05
RDX-201ENST00000343115 CMYA5Q8N3K9 4069 aa8.48□□□□□ -1.05
RDX-201ENST00000343115 KRTAP3-1Q9BYR8 98 aa8.46□□□□□ -1.06
RDX-201ENST00000343115 KMT2AQ03164 3969 aa8.44□□□□□ -1.06
RDX-201ENST00000343115 P0C880 135 aa8.43□□□□□ -1.06
RDX-201ENST00000343115 M0R2T5 61 aa8.42□□□□□ -1.06
RDX-201ENST00000343115 C10orf95Q9H7T3 257 aa8.42□□□□□ -1.06
RDX-201ENST00000343115 KRTAP10-8P60410 259 aa8.38□□□□□ -1.07
RDX-201ENST00000343115 DNAH5Q8TE73 4624 aa8.35□□□□□ -1.07
RDX-201ENST00000343115 VPS13DQ5THJ4 4388 aa8.35□□□□□ -1.07
RDX-201ENST00000343115 DNAH3Q8TD57 4116 aa8.34□□□□□ -1.07
RDX-201ENST00000343115 FAT1Q14517 4588 aa8.28□□□□□ -1.08
RDX-201ENST00000343115 DNAH7Q8WXX0 4024 aa8.27□□□□□ -1.09
RDX-201ENST00000343115 LUZP6Q538Z0 58 aa8.27□□□□□ -1.09
RDX-201ENST00000343115 LRP1BQ9NZR2 4599 aa8.2□□□□□ -1.1
RDX-201ENST00000343115 DNAH8Q96JB1 4490 aa8.2□□□□□ -1.1
RDX-201ENST00000343115 TPRXLQ17RH7 258 aa8.19□□□□□ -1.1
RDX-201ENST00000343115 NDUFAF8A1L188 74 aa8.17□□□□□ -1.1
RDX-201ENST00000343115 DNAH17Q9UFH2 4485 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms