RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 PLA2G1BP04054 148 aaKnown RBP7.59□□□□□ -1.19
SSX2IP-201ENST00000342203 IGLV7-43P04211 117 aa7.58□□□□□ -1.2
SSX2IP-201ENST00000342203 ZNF469Q96JG9 3925 aaPredicted RBP7.57□□□□□ -1.2
SSX2IP-201ENST00000342203 APLNQ9ULZ1 77 aa7.57□□□□□ -1.2
SSX2IP-201ENST00000342203 A0A087X002 238 aa7.56□□□□□ -1.2
SSX2IP-201ENST00000342203 NOTCH2NLQ7Z3S9 236 aa7.56□□□□□ -1.2
SSX2IP-201ENST00000342203 A6NN06 94 aa7.56□□□□□ -1.2
SSX2IP-201ENST00000342203 ADM2Q7Z4H4 148 aa7.56□□□□□ -1.2
SSX2IP-201ENST00000342203 KRTAP11-1Q8IUC1 163 aa7.56□□□□□ -1.2
SSX2IP-201ENST00000342203 AKAP9Q99996 3911 aa7.55□□□□□ -1.2
SSX2IP-201ENST00000342203 C9orf92A6NGG3 77 aa7.54□□□□□ -1.2
SSX2IP-201ENST00000342203 TENM3Q9P273 2699 aa7.54□□□□□ -1.2
SSX2IP-201ENST00000342203 CRIPTQ9P021 101 aa7.54□□□□□ -1.2
SSX2IP-201ENST00000342203 PANO1I0J062 215 aa7.54□□□□□ -1.2
SSX2IP-201ENST00000342203 Q5W150 140 aa7.53□□□□□ -1.2
SSX2IP-201ENST00000342203 NBPF19A0A087WUL8 3843 aa7.52□□□□□ -1.21
SSX2IP-201ENST00000342203 PDZD2O15018 2839 aa7.51□□□□□ -1.21
SSX2IP-201ENST00000342203 WWC2-AS2Q96NR7 200 aa7.5□□□□□ -1.21
SSX2IP-201ENST00000342203 A0A0D9SG42 100 aa7.49□□□□□ -1.21
SSX2IP-201ENST00000342203 Q6ZR54 194 aa7.49□□□□□ -1.21
SSX2IP-201ENST00000342203 VWFP04275 2813 aa7.48□□□□□ -1.21
SSX2IP-201ENST00000342203 A0A1B0GU33 70 aa7.44□□□□□ -1.22
SSX2IP-201ENST00000342203 DMAC1Q96GE9 116 aa7.42□□□□□ -1.22
SSX2IP-201ENST00000342203 TENM1Q9UKZ4 2725 aa7.42□□□□□ -1.22
SSX2IP-201ENST00000342203 TENM4Q6N022 2769 aa7.4□□□□□ -1.22
SSX2IP-201ENST00000342203 LINC00304Q8N9R0 145 aa7.4□□□□□ -1.22
SSX2IP-201ENST00000342203 SMR3BP02814 79 aaPredicted RBP7.4□□□□□ -1.22
SSX2IP-201ENST00000342203 PKD1L1Q8TDX9 2849 aa7.38□□□□□ -1.23
SSX2IP-201ENST00000342203 FBN1P35555 2871 aaKnown RBP7.37□□□□□ -1.23
SSX2IP-201ENST00000342203 SPATA8Q6RVD6 105 aa7.34□□□□□ -1.23
SSX2IP-201ENST00000342203 PLAC8Q9NZF1 115 aa7.34□□□□□ -1.23
SSX2IP-201ENST00000342203 LINC00483Q53H64 154 aa7.31□□□□□ -1.24
SSX2IP-201ENST00000342203 TGP01266 2768 aa7.25□□□□□ -1.25
SSX2IP-201ENST00000342203 SRRM2Q9UQ35 2752 aaKnown RBP7.24□□□□□ -1.25
SSX2IP-201ENST00000342203 OTOGQ6ZRI0 2925 aa7.23□□□□□ -1.25
SSX2IP-201ENST00000342203 KRTAP13-1Q8IUC0 172 aa7.21□□□□□ -1.25
SSX2IP-201ENST00000342203 TENM2Q9NT68 2774 aa7.21□□□□□ -1.26
SSX2IP-201ENST00000342203 ASB16-AS1Q495Z4 193 aa7.19□□□□□ -1.26
SSX2IP-201ENST00000342203 TRRAPQ9Y4A5 3859 aa7.19□□□□□ -1.26
SSX2IP-201ENST00000342203 KRTAP10-2P60368 255 aa7.16□□□□□ -1.26
SSX2IP-201ENST00000342203 H1FX-AS1Q4G0G2 97 aa7.15□□□□□ -1.26
SSX2IP-201ENST00000342203 Q6ZRN7 208 aaPredicted RBP7.12□□□□□ -1.27
SSX2IP-201ENST00000342203 KRTAP25-1Q3LHN0 102 aa7.12□□□□□ -1.27
SSX2IP-201ENST00000342203 KRTAP10-1P60331 282 aa7.1□□□□□ -1.27
SSX2IP-201ENST00000342203 RPL37P61927 97 aaKnown RBP7.1□□□□□ -1.27
SSX2IP-201ENST00000342203 ROMO1P60602 79 aa7.09□□□□□ -1.27
SSX2IP-201ENST00000342203 KRTAP13-2Q52LG2 175 aa7.06□□□□□ -1.28
SSX2IP-201ENST00000342203 Q6ZSA8 131 aa6.99□□□□□ -1.29
SSX2IP-201ENST00000342203 A8MUU9 505 aa6.98□□□□□ -1.29
SSX2IP-201ENST00000342203 FBN3Q75N90 2809 aa6.98□□□□□ -1.29
SSX2IP-201ENST00000342203 CSMD3Q7Z407 3707 aa6.97□□□□□ -1.29
SSX2IP-201ENST00000342203 NDUFAF8A1L188 74 aa6.96□□□□□ -1.29
SSX2IP-201ENST00000342203 COX6B2Q6YFQ2 88 aa6.96□□□□□ -1.3
SSX2IP-201ENST00000342203 S4R3F8 94 aa6.95□□□□□ -1.3
SSX2IP-201ENST00000342203 LUZP6Q538Z0 58 aa6.93□□□□□ -1.3
SSX2IP-201ENST00000342203 H0YAA0 97 aa6.91□□□□□ -1.3
SSX2IP-201ENST00000342203 COL7A1Q02388 2944 aa6.91□□□□□ -1.3
SSX2IP-201ENST00000342203 ANK3Q12955 4377 aaKnown RBP6.88□□□□□ -1.31
SSX2IP-201ENST00000342203 KRTAP13-3Q3SY46 172 aa6.86□□□□□ -1.31
SSX2IP-201ENST00000342203 C10orf95Q9H7T3 257 aa6.85□□□□□ -1.31
SSX2IP-201ENST00000342203 CAMK2N1Q7Z7J9 78 aa6.83□□□□□ -1.32
SSX2IP-201ENST00000342203 R4GN34 69 aa6.81□□□□□ -1.32
SSX2IP-201ENST00000342203 KRTAP16-1A8MUX0 517 aa6.81□□□□□ -1.32
SSX2IP-201ENST00000342203 MEGF8Q7Z7M0 2845 aa6.79□□□□□ -1.32
SSX2IP-201ENST00000342203 ANK2Q01484 3957 aa6.78□□□□□ -1.32
SSX2IP-201ENST00000342203 M0QZ58 72 aa6.77□□□□□ -1.33
SSX2IP-201ENST00000342203 KRTAP1-4P0C5Y4 121 aa6.75□□□□□ -1.33
SSX2IP-201ENST00000342203 A0A0A0MQY5 61 aa6.7□□□□□ -1.34
SSX2IP-201ENST00000342203 C20orf166-AS1Q96NR2 134 aa6.68□□□□□ -1.34
SSX2IP-201ENST00000342203 RPS29P62273 56 aaKnown RBP6.64□□□□□ -1.35
SSX2IP-201ENST00000342203 LYSTQ99698 3801 aa6.63□□□□□ -1.35
SSX2IP-201ENST00000342203 J3QL48 77 aa6.63□□□□□ -1.35
SSX2IP-201ENST00000342203 Q5VSD8 79 aa6.59□□□□□ -1.35
SSX2IP-201ENST00000342203 P0C880 135 aa6.57□□□□□ -1.36
SSX2IP-201ENST00000342203 DNAH10Q8IVF4 4471 aa6.5□□□□□ -1.37
SSX2IP-201ENST00000342203 KRTAP3-1Q9BYR8 98 aa6.49□□□□□ -1.37
SSX2IP-201ENST00000342203 TPRXLQ17RH7 258 aa6.47□□□□□ -1.37
SSX2IP-201ENST00000342203 PLAC4Q8WY50 150 aa6.42□□□□□ -1.38
SSX2IP-201ENST00000342203 KRTAP10-8P60410 259 aa6.4□□□□□ -1.38
SSX2IP-201ENST00000342203 XP32Q5T750 250 aa6.39□□□□□ -1.39
SSX2IP-201ENST00000342203 SEC61BP60468 96 aaKnown RBP6.38□□□□□ -1.39
SSX2IP-201ENST00000342203 KRTAP12-2P59991 146 aa6.38□□□□□ -1.39
SSX2IP-201ENST00000342203 KRTAP13-4Q3LI77 160 aa6.36□□□□□ -1.39
SSX2IP-201ENST00000342203 M0R2T5 61 aa6.34□□□□□ -1.39
SSX2IP-201ENST00000342203 DNAH7Q8WXX0 4024 aa6.34□□□□□ -1.39
SSX2IP-201ENST00000342203 DNAH9Q9NYC9 4486 aa6.31□□□□□ -1.4
SSX2IP-201ENST00000342203 CMYA5Q8N3K9 4069 aa6.3□□□□□ -1.4
SSX2IP-201ENST00000342203 KRTAP10-6P60371 365 aaPredicted RBP6.28□□□□□ -1.4
SSX2IP-201ENST00000342203 KRTAP12-1P59990 96 aa6.26□□□□□ -1.41
SSX2IP-201ENST00000342203 HUWE1Q7Z6Z7 4374 aaKnown RBP6.23□□□□□ -1.41
SSX2IP-201ENST00000342203 TNP1P09430 55 aa6.19□□□□□ -1.42
SSX2IP-201ENST00000342203 PLECQ15149 4684 aaKnown RBP6.17□□□□□ -1.42
SSX2IP-201ENST00000342203 FRAS1Q86XX4 4008 aa6.17□□□□□ -1.42
SSX2IP-201ENST00000342203 KMT2AQ03164 3969 aa6.14□□□□□ -1.43
SSX2IP-201ENST00000342203 PP632Q6XCG6 107 aa6.13□□□□□ -1.43
SSX2IP-201ENST00000342203 KRTAP15-1Q3LI76 137 aa6.12□□□□□ -1.43
SSX2IP-201ENST00000342203 KRTAP3-2Q9BYR7 98 aa6.1□□□□□ -1.43
SSX2IP-201ENST00000342203 DNHD1Q96M86 4753 aa6.09□□□□□ -1.43
SSX2IP-201ENST00000342203 PRKDCP78527 4128 aaKnown RBP6.09□□□□□ -1.43
SSX2IP-201ENST00000342203 A0A1B0GVY2 172 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms