RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 KTN1-AS1Q86SY8 53 aa12.34□□□□□ -0.43
CLPB-202ENST00000340729 VPS13DQ5THJ4 4388 aa12.33□□□□□ -0.44
CLPB-202ENST00000340729 NUPR2A6NF83 97 aa12.33□□□□□ -0.44
CLPB-202ENST00000340729 SPAG11AQ6PDA7 123 aa12.33□□□□□ -0.44
CLPB-202ENST00000340729 SPTSSBQ8NFR3 76 aa12.31□□□□□ -0.44
CLPB-202ENST00000340729 MEGF8Q7Z7M0 2845 aa12.3□□□□□ -0.44
CLPB-202ENST00000340729 IGLV5-52A0A0A0MRZ9 124 aa12.3□□□□□ -0.44
CLPB-202ENST00000340729 A6NN06 94 aa12.29□□□□□ -0.44
CLPB-202ENST00000340729 A0A087X002 238 aa12.26□□□□□ -0.45
CLPB-202ENST00000340729 NOTCH2NLQ7Z3S9 236 aa12.26□□□□□ -0.45
CLPB-202ENST00000340729 PSORS1C2Q9UIG4 136 aa12.26□□□□□ -0.45
CLPB-202ENST00000340729 ZNF861PO60384 105 aa12.26□□□□□ -0.45
CLPB-202ENST00000340729 KRTAP13-3Q3SY46 172 aa12.26□□□□□ -0.45
CLPB-202ENST00000340729 A0A087WTM6 91 aa12.22□□□□□ -0.45
CLPB-202ENST00000340729 KMT2AQ03164 3969 aa12.19□□□□□ -0.46
CLPB-202ENST00000340729 SPINK7P58062 85 aa12.17□□□□□ -0.46
CLPB-202ENST00000340729 Q5W150 140 aa12.17□□□□□ -0.46
CLPB-202ENST00000340729 ANAPC11Q9NYG5 84 aa12.17□□□□□ -0.46
CLPB-202ENST00000340729 RTL8CO15255 209 aa12.15□□□□□ -0.46
CLPB-202ENST00000340729 DNAH2Q9P225 4427 aa12.15□□□□□ -0.46
CLPB-202ENST00000340729 C8orf87E5RJ46 101 aa12.15□□□□□ -0.46
CLPB-202ENST00000340729 ACYP2P14621 99 aa12.13□□□□□ -0.47
CLPB-202ENST00000340729 C7orf65Q6ZTY9 151 aa12.1□□□□□ -0.47
CLPB-202ENST00000340729 PRR26Q8N8Z3 221 aa12.1□□□□□ -0.47
CLPB-202ENST00000340729 SPINK6Q6UWN8 80 aa12.09□□□□□ -0.47
CLPB-202ENST00000340729 RBM12B-AS1Q9P1G2 102 aa12.09□□□□□ -0.47
CLPB-202ENST00000340729 DNAH8Q96JB1 4490 aa12.08□□□□□ -0.48
CLPB-202ENST00000340729 HECTD4Q9Y4D8 3996 aa12.08□□□□□ -0.48
CLPB-202ENST00000340729 DMAC1Q96GE9 116 aa12.07□□□□□ -0.48
CLPB-202ENST00000340729 DNAH17Q9UFH2 4485 aa12.06□□□□□ -0.48
CLPB-202ENST00000340729 IGLV7-43P04211 117 aa12.06□□□□□ -0.48
CLPB-202ENST00000340729 SSBP3-AS1Q7Z2R9 100 aa12.06□□□□□ -0.48
CLPB-202ENST00000340729 FBN3Q75N90 2809 aa12.03□□□□□ -0.48
CLPB-202ENST00000340729 ALMS1Q8TCU4 4167 aa12.02□□□□□ -0.49
CLPB-202ENST00000340729 CIRBP-AS1Q8TBR5 109 aa12.01□□□□□ -0.49
CLPB-202ENST00000340729 FAM229AH3BQW9 127 aa12.01□□□□□ -0.49
CLPB-202ENST00000340729 TGP01266 2768 aa11.98□□□□□ -0.49
CLPB-202ENST00000340729 FRAS1Q86XX4 4008 aa11.96□□□□□ -0.49
CLPB-202ENST00000340729 DNAH6Q9C0G6 4158 aa11.96□□□□□ -0.49
CLPB-202ENST00000340729 LINC00313P59037 77 aa11.96□□□□□ -0.5
CLPB-202ENST00000340729 IGKV2-30P06310 120 aa11.94□□□□□ -0.5
CLPB-202ENST00000340729 LY6G6CO95867 125 aa11.9□□□□□ -0.5
CLPB-202ENST00000340729 KRTAP21-3Q3LHN1 58 aa11.87□□□□□ -0.51
CLPB-202ENST00000340729 A0A1B0GU69 56 aa11.87□□□□□ -0.51
CLPB-202ENST00000340729 C1orf134Q5TEV5 83 aa11.87□□□□□ -0.51
CLPB-202ENST00000340729 HYDINQ4G0P3 5121 aa11.86□□□□□ -0.51
CLPB-202ENST00000340729 DNAH5Q8TE73 4624 aa11.85□□□□□ -0.51
CLPB-202ENST00000340729 SPATA8Q6RVD6 105 aa11.85□□□□□ -0.51
CLPB-202ENST00000340729 KRTAP16-1A8MUX0 517 aa11.83□□□□□ -0.51
CLPB-202ENST00000340729 DNAH11Q96DT5 4516 aa11.83□□□□□ -0.52
CLPB-202ENST00000340729 KRTAP13-2Q52LG2 175 aa11.78□□□□□ -0.52
CLPB-202ENST00000340729 PLA2G1BP04054 148 aaKnown RBP11.77□□□□□ -0.53
CLPB-202ENST00000340729 RETNLBQ9BQ08 111 aa11.75□□□□□ -0.53
CLPB-202ENST00000340729 UQCR11O14957 56 aa11.74□□□□□ -0.53
CLPB-202ENST00000340729 FAT2Q9NYQ8 4349 aa11.73□□□□□ -0.53
CLPB-202ENST00000340729 MIR22HGQ0VDD5 57 aa11.71□□□□□ -0.54
CLPB-202ENST00000340729 PKD1P98161 4303 aa11.7□□□□□ -0.54
CLPB-202ENST00000340729 KRTAP10-2P60368 255 aa11.69□□□□□ -0.54
CLPB-202ENST00000340729 IGKV2D-30A0A075B6S6 120 aa11.67□□□□□ -0.54
CLPB-202ENST00000340729 Q6ZSA8 131 aa11.63□□□□□ -0.55
CLPB-202ENST00000340729 KRTAP1-4P0C5Y4 121 aa11.61□□□□□ -0.55
CLPB-202ENST00000340729 PRAC1Q96KF2 57 aa11.61□□□□□ -0.55
CLPB-202ENST00000340729 SACSQ9NZJ4 4579 aa11.61□□□□□ -0.55
CLPB-202ENST00000340729 ADM2Q7Z4H4 148 aa11.56□□□□□ -0.56
CLPB-202ENST00000340729 KRTAP10-1P60331 282 aa11.53□□□□□ -0.56
CLPB-202ENST00000340729 LRP1BQ9NZR2 4599 aa11.52□□□□□ -0.56
CLPB-202ENST00000340729 SPINK1P00995 79 aa11.51□□□□□ -0.57
CLPB-202ENST00000340729 C4orf48Q5BLP8 95 aa11.5□□□□□ -0.57
CLPB-202ENST00000340729 LINC01554Q52M75 96 aa11.46□□□□□ -0.57
CLPB-202ENST00000340729 PKHD1P08F94 4074 aa11.44□□□□□ -0.58
CLPB-202ENST00000340729 TYMSOSQ8TAI1 123 aa11.44□□□□□ -0.58
CLPB-202ENST00000340729 RPS29P62273 56 aaKnown RBP11.42□□□□□ -0.58
CLPB-202ENST00000340729 VPS13BQ7Z7G8 4022 aa11.39□□□□□ -0.59
CLPB-202ENST00000340729 Q8N1X5 172 aa11.37□□□□□ -0.59
CLPB-202ENST00000340729 DYNC1H1Q14204 4646 aaKnown RBP11.31□□□□□ -0.6
CLPB-202ENST00000340729 LINC00304Q8N9R0 145 aa11.29□□□□□ -0.6
CLPB-202ENST00000340729 CSAG1Q6PB30 78 aa11.29□□□□□ -0.6
CLPB-202ENST00000340729 RYR2Q92736 4967 aa11.28□□□□□ -0.6
CLPB-202ENST00000340729 H0YAA0 97 aa11.24□□□□□ -0.61
CLPB-202ENST00000340729 A8MUU9 505 aa11.23□□□□□ -0.61
CLPB-202ENST00000340729 C20orf166-AS1Q96NR2 134 aa11.23□□□□□ -0.61
CLPB-202ENST00000340729 KMT2CQ8NEZ4 4911 aaKnown RBP11.21□□□□□ -0.61
CLPB-202ENST00000340729 APOBP04114 4563 aaKnown RBP11.19□□□□□ -0.62
CLPB-202ENST00000340729 A0A1B0GVY2 172 aa11.17□□□□□ -0.62
CLPB-202ENST00000340729 KRTAP3-1Q9BYR8 98 aa11.16□□□□□ -0.62
CLPB-202ENST00000340729 A0A1B0GU33 70 aa11.15□□□□□ -0.63
CLPB-202ENST00000340729 H1FX-AS1Q4G0G2 97 aa11.12□□□□□ -0.63
CLPB-202ENST00000340729 FAT1Q14517 4588 aa11.11□□□□□ -0.63
CLPB-202ENST00000340729 SMR3BP02814 79 aaPredicted RBP11.08□□□□□ -0.63
CLPB-202ENST00000340729 C9orf92A6NGG3 77 aa11.05□□□□□ -0.64
CLPB-202ENST00000340729 KRTAP25-1Q3LHN0 102 aa11.02□□□□□ -0.64
CLPB-202ENST00000340729 PKHD1L1Q86WI1 4243 aa10.97□□□□□ -0.65
CLPB-202ENST00000340729 COX6B2Q6YFQ2 88 aa10.97□□□□□ -0.65
CLPB-202ENST00000340729 KRTAP10-4P60372 401 aaPredicted RBP10.96□□□□□ -0.65
CLPB-202ENST00000340729 RYR3Q15413 4870 aa10.93□□□□□ -0.66
CLPB-202ENST00000340729 K7ERS5 55 aa10.9□□□□□ -0.66
CLPB-202ENST00000340729 HSPG2P98160 4391 aa10.8□□□□□ -0.68
CLPB-202ENST00000340729 ROMO1P60602 79 aa10.75□□□□□ -0.69
CLPB-202ENST00000340729 H3BS24 57 aa10.72□□□□□ -0.69
CLPB-202ENST00000340729 KRTAP10-6P60371 365 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms