RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 PCOTHQ58A44 107 aa9.34□□□□□ -0.91
BRAT1-201ENST00000340611 PKHD1P08F94 4074 aa9.34□□□□□ -0.91
BRAT1-201ENST00000340611 IGLV5-52A0A0A0MRZ9 124 aa9.33□□□□□ -0.92
BRAT1-201ENST00000340611 KRTAP11-1Q8IUC1 163 aa9.33□□□□□ -0.92
BRAT1-201ENST00000340611 SPRR4Q96PI1 79 aa9.32□□□□□ -0.92
BRAT1-201ENST00000340611 RYR2Q92736 4967 aa9.32□□□□□ -0.92
BRAT1-201ENST00000340611 LINC01554Q52M75 96 aa9.31□□□□□ -0.92
BRAT1-201ENST00000340611 PRR26Q8N8Z3 221 aa9.31□□□□□ -0.92
BRAT1-201ENST00000340611 SPANXA2-OT1Q8N9U9 137 aa9.3□□□□□ -0.92
BRAT1-201ENST00000340611 A0A1B0GW54 56 aa9.3□□□□□ -0.92
BRAT1-201ENST00000340611 SPRR1AP35321 89 aa9.3□□□□□ -0.92
BRAT1-201ENST00000340611 DNAH8Q96JB1 4490 aa9.29□□□□□ -0.92
BRAT1-201ENST00000340611 PLA2G2DQ9UNK4 145 aa9.28□□□□□ -0.92
BRAT1-201ENST00000340611 CASC2Q6XLA1 102 aa9.26□□□□□ -0.93
BRAT1-201ENST00000340611 RYR3Q15413 4870 aa9.25□□□□□ -0.93
BRAT1-201ENST00000340611 IGLV5-37A0A075B6J1 123 aa9.25□□□□□ -0.93
BRAT1-201ENST00000340611 IGFL1Q6UW32 110 aa9.25□□□□□ -0.93
BRAT1-201ENST00000340611 SPACA4Q8TDM5 124 aa9.25□□□□□ -0.93
BRAT1-201ENST00000340611 A0A087WSZ3 146 aa9.25□□□□□ -0.93
BRAT1-201ENST00000340611 PRLHP81277 87 aa9.23□□□□□ -0.93
BRAT1-201ENST00000340611 REG3GQ6UW15 175 aa9.22□□□□□ -0.93
BRAT1-201ENST00000340611 LINC01558Q9Y6Z2 57 aa9.22□□□□□ -0.93
BRAT1-201ENST00000340611 KRTAP10-1P60331 282 aa9.21□□□□□ -0.93
BRAT1-201ENST00000340611 IGLV7-46A0A075B6I9 117 aa9.17□□□□□ -0.94
BRAT1-201ENST00000340611 KRTAP29-1A8MX34 341 aaPredicted RBP9.16□□□□□ -0.94
BRAT1-201ENST00000340611 LRP1BQ9NZR2 4599 aa9.16□□□□□ -0.94
BRAT1-201ENST00000340611 CIRBP-AS1Q8TBR5 109 aa9.15□□□□□ -0.94
BRAT1-201ENST00000340611 PLAC8Q9NZF1 115 aa9.13□□□□□ -0.95
BRAT1-201ENST00000340611 H3BPC8 53 aa9.13□□□□□ -0.95
BRAT1-201ENST00000340611 DYNC1H1Q14204 4646 aaKnown RBP9.12□□□□□ -0.95
BRAT1-201ENST00000340611 H0Y9J4 135 aa9.11□□□□□ -0.95
BRAT1-201ENST00000340611 PSORS1C2Q9UIG4 136 aa9.11□□□□□ -0.95
BRAT1-201ENST00000340611 HRES1P13985 223 aa9.1□□□□□ -0.95
BRAT1-201ENST00000340611 RETNLBQ9BQ08 111 aa9.1□□□□□ -0.95
BRAT1-201ENST00000340611 PLA2G1BP04054 148 aaKnown RBP9.08□□□□□ -0.96
BRAT1-201ENST00000340611 CSAG1Q6PB30 78 aa9.07□□□□□ -0.96
BRAT1-201ENST00000340611 IGLV8-61A0A075B6I0 122 aa9.06□□□□□ -0.96
BRAT1-201ENST00000340611 A0A1B0GVY2 172 aa9.06□□□□□ -0.96
BRAT1-201ENST00000340611 Q6ZSA8 131 aa9.05□□□□□ -0.96
BRAT1-201ENST00000340611 VPS13BQ7Z7G8 4022 aa9.04□□□□□ -0.96
BRAT1-201ENST00000340611 A8MWP4 228 aa9.03□□□□□ -0.96
BRAT1-201ENST00000340611 SMR3BP02814 79 aaPredicted RBP9.02□□□□□ -0.97
BRAT1-201ENST00000340611 LINC00472Q9H8W2 130 aa9.01□□□□□ -0.97
BRAT1-201ENST00000340611 ZNF706Q9Y5V0 76 aaPredicted RBP9.01□□□□□ -0.97
BRAT1-201ENST00000340611 ANAPC11Q9NYG5 84 aa9.01□□□□□ -0.97
BRAT1-201ENST00000340611 KRTAP13-1Q8IUC0 172 aa9□□□□□ -0.97
BRAT1-201ENST00000340611 FAT1Q14517 4588 aa9□□□□□ -0.97
BRAT1-201ENST00000340611 APOBP04114 4563 aaKnown RBP8.98□□□□□ -0.97
BRAT1-201ENST00000340611 MMP24-AS1A0A0U1RRL7 71 aa8.97□□□□□ -0.97
BRAT1-201ENST00000340611 EPPK1P58107 5090 aaKnown RBP8.94□□□□□ -0.98
BRAT1-201ENST00000340611 IGLV7-43P04211 117 aa8.93□□□□□ -0.98
BRAT1-201ENST00000340611 ZNF861PO60384 105 aa8.92□□□□□ -0.98
BRAT1-201ENST00000340611 SPRR1BP22528 89 aa8.91□□□□□ -0.98
BRAT1-201ENST00000340611 IGLV9-49A0A0B4J1Y8 123 aa8.9□□□□□ -0.98
BRAT1-201ENST00000340611 A0A1B0GU69 56 aa8.87□□□□□ -0.99
BRAT1-201ENST00000340611 KIAA1109Q2LD37 5005 aa8.85□□□□□ -0.99
BRAT1-201ENST00000340611 IGHV6-1A0A0B4J1U7 121 aa8.84□□□□□ -0.99
BRAT1-201ENST00000340611 MIR22HGQ0VDD5 57 aa8.84□□□□□ -0.99
BRAT1-201ENST00000340611 Q96NJ1 140 aa8.84□□□□□ -0.99
BRAT1-201ENST00000340611 C8orf17Q9NRJ1 99 aa8.83□□□□□ -1
BRAT1-201ENST00000340611 HSPG2P98160 4391 aa8.81□□□□□ -1
BRAT1-201ENST00000340611 SPATA8Q6RVD6 105 aa8.81□□□□□ -1
BRAT1-201ENST00000340611 TP53AIP1Q9HCN2 124 aa8.81□□□□□ -1
BRAT1-201ENST00000340611 KRTAP17-1Q9BYP8 105 aa8.79□□□□□ -1
BRAT1-201ENST00000340611 FLG2Q5D862 2391 aaPredicted RBP8.79□□□□□ -1
BRAT1-201ENST00000340611 A0A087X002 238 aa8.78□□□□□ -1
BRAT1-201ENST00000340611 NOTCH2NLQ7Z3S9 236 aa8.78□□□□□ -1
BRAT1-201ENST00000340611 ASB16-AS1Q495Z4 193 aa8.78□□□□□ -1
BRAT1-201ENST00000340611 LINC00483Q53H64 154 aa8.76□□□□□ -1.01
BRAT1-201ENST00000340611 RYR1P21817 5038 aa8.75□□□□□ -1.01
BRAT1-201ENST00000340611 A0A1B0GVX0 72 aa8.75□□□□□ -1.01
BRAT1-201ENST00000340611 ACYP2P14621 99 aa8.75□□□□□ -1.01
BRAT1-201ENST00000340611 UQCR11O14957 56 aa8.74□□□□□ -1.01
BRAT1-201ENST00000340611 CDK2AP2O75956 126 aa8.74□□□□□ -1.01
BRAT1-201ENST00000340611 KRTAP10-4P60372 401 aaPredicted RBP8.73□□□□□ -1.01
BRAT1-201ENST00000340611 MRPL34Q9BQ48 92 aaKnown RBP8.73□□□□□ -1.01
BRAT1-201ENST00000340611 KRTAP1-4P0C5Y4 121 aa8.72□□□□□ -1.01
BRAT1-201ENST00000340611 KRTAP13-2Q52LG2 175 aa8.71□□□□□ -1.01
BRAT1-201ENST00000340611 ROMO1P60602 79 aa8.7□□□□□ -1.02
BRAT1-201ENST00000340611 Q5W150 140 aa8.7□□□□□ -1.02
BRAT1-201ENST00000340611 SPINK6Q6UWN8 80 aa8.7□□□□□ -1.02
BRAT1-201ENST00000340611 LRP1Q07954 4544 aaKnown RBP8.69□□□□□ -1.02
BRAT1-201ENST00000340611 Q5VSD8 79 aa8.66□□□□□ -1.02
BRAT1-201ENST00000340611 CRIPTQ9P021 101 aa8.64□□□□□ -1.03
BRAT1-201ENST00000340611 MYCBP2O75592 4640 aa8.62□□□□□ -1.03
BRAT1-201ENST00000340611 FAM229AH3BQW9 127 aa8.62□□□□□ -1.03
BRAT1-201ENST00000340611 PKHD1L1Q86WI1 4243 aa8.6□□□□□ -1.03
BRAT1-201ENST00000340611 TYMSOSQ8TAI1 123 aa8.57□□□□□ -1.04
BRAT1-201ENST00000340611 DMAC1Q96GE9 116 aa8.57□□□□□ -1.04
BRAT1-201ENST00000340611 KRTAP25-1Q3LHN0 102 aa8.57□□□□□ -1.04
BRAT1-201ENST00000340611 KRTAP13-3Q3SY46 172 aa8.55□□□□□ -1.04
BRAT1-201ENST00000340611 P0C880 135 aa8.55□□□□□ -1.04
BRAT1-201ENST00000340611 KRTAP4-5Q9BYR2 181 aa8.54□□□□□ -1.04
BRAT1-201ENST00000340611 SSBP3-AS1Q7Z2R9 100 aa8.53□□□□□ -1.04
BRAT1-201ENST00000340611 SPINK1P00995 79 aa8.52□□□□□ -1.05
BRAT1-201ENST00000340611 DMBT1Q9UGM3 2413 aaPredicted RBP8.51□□□□□ -1.05
BRAT1-201ENST00000340611 A8MUU9 505 aa8.49□□□□□ -1.05
BRAT1-201ENST00000340611 Q8N1X5 172 aa8.48□□□□□ -1.05
BRAT1-201ENST00000340611 FAT3Q8TDW7 4589 aa8.45□□□□□ -1.06
BRAT1-201ENST00000340611 TNXBP22105 4242 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms