RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 DMBT1Q9UGM3 2413 aaPredicted RBP8.54□□□□□ -1.04
CSRP1-201ENST00000340006 A0A1B0GW54 56 aa8.54□□□□□ -1.04
CSRP1-201ENST00000340006 SPINK1P00995 79 aa8.54□□□□□ -1.04
CSRP1-201ENST00000340006 CD164Q04900 197 aa8.53□□□□□ -1.04
CSRP1-201ENST00000340006 UBL5Q9BZL1 73 aa8.53□□□□□ -1.04
CSRP1-201ENST00000340006 A0A087WSZ3 146 aa8.51□□□□□ -1.05
CSRP1-201ENST00000340006 Q6ZVQ6 151 aa8.5□□□□□ -1.05
CSRP1-201ENST00000340006 SERP1Q9Y6X1 66 aa8.49□□□□□ -1.05
CSRP1-201ENST00000340006 NREPQ16612 68 aa8.48□□□□□ -1.05
CSRP1-201ENST00000340006 LIMD2Q9BT23 127 aa8.48□□□□□ -1.05
CSRP1-201ENST00000340006 C1orf195Q5TG92 126 aa8.46□□□□□ -1.05
CSRP1-201ENST00000340006 IGKV3D-7A0A0C4DH55 119 aa8.44□□□□□ -1.06
CSRP1-201ENST00000340006 FAM236DA0A1B0GTK5 79 aa8.44□□□□□ -1.06
CSRP1-201ENST00000340006 FAM236CP0DP71 79 aa8.44□□□□□ -1.06
CSRP1-201ENST00000340006 RPS29P62273 56 aaKnown RBP8.44□□□□□ -1.06
CSRP1-201ENST00000340006 SMIM26A0A096LP01 95 aa8.42□□□□□ -1.06
CSRP1-201ENST00000340006 ATP5EP2Q5VTU8 51 aa8.41□□□□□ -1.06
CSRP1-201ENST00000340006 RETNLBQ9BQ08 111 aa8.41□□□□□ -1.06
CSRP1-201ENST00000340006 BPY2O14599 106 aa8.39□□□□□ -1.07
CSRP1-201ENST00000340006 CXCL6P80162 114 aa8.38□□□□□ -1.07
CSRP1-201ENST00000340006 DEFB116Q30KQ4 102 aa8.37□□□□□ -1.07
CSRP1-201ENST00000340006 FP248Q71RG6 208 aaPredicted RBP8.37□□□□□ -1.07
CSRP1-201ENST00000340006 ASB16-AS1Q495Z4 193 aa8.36□□□□□ -1.07
CSRP1-201ENST00000340006 LINC00472Q9H8W2 130 aa8.36□□□□□ -1.07
CSRP1-201ENST00000340006 PRR4Q16378 134 aa8.35□□□□□ -1.07
CSRP1-201ENST00000340006 H7BZZ5 65 aa8.33□□□□□ -1.08
CSRP1-201ENST00000340006 Q96NJ1 140 aa8.33□□□□□ -1.08
CSRP1-201ENST00000340006 A0A087WVE0 104 aa8.33□□□□□ -1.08
CSRP1-201ENST00000340006 DSCR10P59022 87 aa8.31□□□□□ -1.08
CSRP1-201ENST00000340006 Q8N9L7 120 aa8.31□□□□□ -1.08
CSRP1-201ENST00000340006 IGKV4-1P06312 121 aa8.31□□□□□ -1.08
CSRP1-201ENST00000340006 KLKP1Q107X0 134 aa8.3□□□□□ -1.08
CSRP1-201ENST00000340006 BRK1Q8WUW1 75 aa8.29□□□□□ -1.08
CSRP1-201ENST00000340006 K7EQZ3 153 aa8.28□□□□□ -1.08
CSRP1-201ENST00000340006 IGLV7-46A0A075B6I9 117 aa8.28□□□□□ -1.08
CSRP1-201ENST00000340006 ATP5EP56381 51 aaPredicted RBP8.28□□□□□ -1.08
CSRP1-201ENST00000340006 HERC1Q15751 4861 aa8.27□□□□□ -1.09
CSRP1-201ENST00000340006 C20orf197Q8N268 126 aa8.27□□□□□ -1.09
CSRP1-201ENST00000340006 A0A0U1RQV1 116 aa8.26□□□□□ -1.09
CSRP1-201ENST00000340006 A8MWP4 228 aa8.26□□□□□ -1.09
CSRP1-201ENST00000340006 TRAV7A0A075B6U4 112 aa8.24□□□□□ -1.09
CSRP1-201ENST00000340006 PMAIP1Q13794 54 aa8.24□□□□□ -1.09
CSRP1-201ENST00000340006 NDUFC1O43677 76 aa8.23□□□□□ -1.09
CSRP1-201ENST00000340006 NDUFB1O75438 58 aa8.22□□□□□ -1.09
CSRP1-201ENST00000340006 PRR15Q8IV56 129 aa8.22□□□□□ -1.09
CSRP1-201ENST00000340006 IGHV6-1A0A0B4J1U7 121 aa8.2□□□□□ -1.1
CSRP1-201ENST00000340006 A0A1B0GVX0 72 aa8.19□□□□□ -1.1
CSRP1-201ENST00000340006 C9orf92A6NGG3 77 aa8.19□□□□□ -1.1
CSRP1-201ENST00000340006 LINC00313P59037 77 aa8.16□□□□□ -1.1
CSRP1-201ENST00000340006 HCG22E2RYF7 251 aa8.15□□□□□ -1.1
CSRP1-201ENST00000340006 KRTAP13-3Q3SY46 172 aa8.13□□□□□ -1.11
CSRP1-201ENST00000340006 MMP24-AS1A0A0U1RRL7 71 aa8.13□□□□□ -1.11
CSRP1-201ENST00000340006 TPRXLQ17RH7 258 aa8.13□□□□□ -1.11
CSRP1-201ENST00000340006 WFDC13Q8IUB5 93 aa8.13□□□□□ -1.11
CSRP1-201ENST00000340006 C8orf17Q9NRJ1 99 aa8.13□□□□□ -1.11
CSRP1-201ENST00000340006 NOTCH2NLQ7Z3S9 236 aa8.11□□□□□ -1.11
CSRP1-201ENST00000340006 CASC2Q6XLA1 102 aa8.11□□□□□ -1.11
CSRP1-201ENST00000340006 LPAP08519 4548 aa8.11□□□□□ -1.11
CSRP1-201ENST00000340006 hDV103S1A0JD37 113 aa8.1□□□□□ -1.11
CSRP1-201ENST00000340006 C8orf87E5RJ46 101 aa8.1□□□□□ -1.11
CSRP1-201ENST00000340006 SNURFQ9Y675 71 aa8.07□□□□□ -1.12
CSRP1-201ENST00000340006 HMCN2Q8NDA2 5059 aa8.05□□□□□ -1.12
CSRP1-201ENST00000340006 A0A0A0MQY5 61 aa8.04□□□□□ -1.12
CSRP1-201ENST00000340006 XP32Q5T750 250 aa8.04□□□□□ -1.12
CSRP1-201ENST00000340006 MPLKIPQ8TAP9 179 aa8.03□□□□□ -1.12
CSRP1-201ENST00000340006 TMEM254Q8TBM7 123 aa8.03□□□□□ -1.12
CSRP1-201ENST00000340006 MRPL34Q9BQ48 92 aaKnown RBP8.03□□□□□ -1.12
CSRP1-201ENST00000340006 OCR1Q9BZK8 76 aa8.02□□□□□ -1.12
CSRP1-201ENST00000340006 Q1T7F1 81 aa8.02□□□□□ -1.13
CSRP1-201ENST00000340006 KRTAP16-1A8MUX0 517 aa7.99□□□□□ -1.13
CSRP1-201ENST00000340006 LRP2P98164 4655 aa7.99□□□□□ -1.13
CSRP1-201ENST00000340006 NDUFS5O43920 106 aa7.98□□□□□ -1.13
CSRP1-201ENST00000340006 C20orf166-AS1Q96NR2 134 aa7.95□□□□□ -1.14
CSRP1-201ENST00000340006 Q75L30 129 aa7.95□□□□□ -1.14
CSRP1-201ENST00000340006 Q8N9P0 234 aaPredicted RBP7.95□□□□□ -1.14
CSRP1-201ENST00000340006 A8MUU9 505 aa7.94□□□□□ -1.14
CSRP1-201ENST00000340006 RPL37P61927 97 aaKnown RBP7.94□□□□□ -1.14
CSRP1-201ENST00000340006 ATP11AUNQ6ZP68 121 aa7.94□□□□□ -1.14
CSRP1-201ENST00000340006 TP53AIP1Q9HCN2 124 aa7.93□□□□□ -1.14
CSRP1-201ENST00000340006 SEC61BP60468 96 aaKnown RBP7.91□□□□□ -1.14
CSRP1-201ENST00000340006 KTN1-AS1Q86SY8 53 aa7.91□□□□□ -1.14
CSRP1-201ENST00000340006 RBM12B-AS1Q9P1G2 102 aa7.91□□□□□ -1.14
CSRP1-201ENST00000340006 PCOTHQ58A44 107 aa7.89□□□□□ -1.15
CSRP1-201ENST00000340006 TRAV22A0A0B4J277 110 aa7.87□□□□□ -1.15
CSRP1-201ENST00000340006 H0Y9P7 68 aa7.84□□□□□ -1.15
CSRP1-201ENST00000340006 Q5W150 140 aa7.84□□□□□ -1.15
CSRP1-201ENST00000340006 ZCCHC13Q8WW36 166 aaKnown RBP7.84□□□□□ -1.15
CSRP1-201ENST00000340006 MP68P56378 58 aa7.83□□□□□ -1.16
CSRP1-201ENST00000340006 UBR4Q5T4S7 5183 aa7.81□□□□□ -1.16
CSRP1-201ENST00000340006 C1orf64Q8NEQ6 169 aa7.79□□□□□ -1.16
CSRP1-201ENST00000340006 LINC00208Q96KT6 92 aa7.79□□□□□ -1.16
CSRP1-201ENST00000340006 CYP4F30PQ9H0H9 118 aa7.79□□□□□ -1.16
CSRP1-201ENST00000340006 H3BPC8 53 aa7.77□□□□□ -1.17
CSRP1-201ENST00000340006 PSPHP1O15172 72 aa7.76□□□□□ -1.17
CSRP1-201ENST00000340006 Q5VV11 94 aa7.74□□□□□ -1.17
CSRP1-201ENST00000340006 MUC17Q685J3 4493 aa7.73□□□□□ -1.17
CSRP1-201ENST00000340006 A6NN06 94 aa7.73□□□□□ -1.17
CSRP1-201ENST00000340006 LOC101927531A0A1B0GV80 90 aa7.71□□□□□ -1.17
CSRP1-201ENST00000340006 A8MUN3 132 aa7.71□□□□□ -1.17
CSRP1-201ENST00000340006 MUC2Q02817 5179 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms