RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 HYDINQ4G0P3 5121 aa11.4□□□□□ -0.59
PSPC1-201ENST00000338910 ASB16-AS1Q495Z4 193 aa11.36□□□□□ -0.59
PSPC1-201ENST00000338910 DNAH6Q9C0G6 4158 aa11.35□□□□□ -0.59
PSPC1-201ENST00000338910 PCOTHQ58A44 107 aa11.35□□□□□ -0.59
PSPC1-201ENST00000338910 IGLV5-52A0A0A0MRZ9 124 aa11.34□□□□□ -0.59
PSPC1-201ENST00000338910 A6NN06 94 aa11.34□□□□□ -0.59
PSPC1-201ENST00000338910 CDC42SE1Q9NRR8 79 aa11.34□□□□□ -0.59
PSPC1-201ENST00000338910 PLAC8Q9NZF1 115 aa11.33□□□□□ -0.6
PSPC1-201ENST00000338910 TP53AIP1Q9HCN2 124 aa11.33□□□□□ -0.6
PSPC1-201ENST00000338910 LINC01558Q9Y6Z2 57 aa11.33□□□□□ -0.6
PSPC1-201ENST00000338910 ALMS1Q8TCU4 4167 aa11.32□□□□□ -0.6
PSPC1-201ENST00000338910 KRTAP13-1Q8IUC0 172 aa11.32□□□□□ -0.6
PSPC1-201ENST00000338910 FRAS1Q86XX4 4008 aa11.32□□□□□ -0.6
PSPC1-201ENST00000338910 Q96NJ1 140 aa11.3□□□□□ -0.6
PSPC1-201ENST00000338910 MOBPQ13875 183 aa11.29□□□□□ -0.6
PSPC1-201ENST00000338910 SPAG11AQ6PDA7 123 aa11.29□□□□□ -0.6
PSPC1-201ENST00000338910 DNAH8Q96JB1 4490 aa11.29□□□□□ -0.6
PSPC1-201ENST00000338910 DNAH11Q96DT5 4516 aa11.27□□□□□ -0.61
PSPC1-201ENST00000338910 DNAH5Q8TE73 4624 aa11.27□□□□□ -0.61
PSPC1-201ENST00000338910 PSORS1C2Q9UIG4 136 aa11.27□□□□□ -0.61
PSPC1-201ENST00000338910 C8orf17Q9NRJ1 99 aa11.25□□□□□ -0.61
PSPC1-201ENST00000338910 KRTAP10-2P60368 255 aa11.24□□□□□ -0.61
PSPC1-201ENST00000338910 FAT2Q9NYQ8 4349 aa11.24□□□□□ -0.61
PSPC1-201ENST00000338910 C8orf87E5RJ46 101 aa11.22□□□□□ -0.61
PSPC1-201ENST00000338910 HRES1P13985 223 aa11.22□□□□□ -0.61
PSPC1-201ENST00000338910 H3BS24 57 aa11.2□□□□□ -0.62
PSPC1-201ENST00000338910 PKD1P98161 4303 aa11.2□□□□□ -0.62
PSPC1-201ENST00000338910 IGLV9-49A0A0B4J1Y8 123 aa11.19□□□□□ -0.62
PSPC1-201ENST00000338910 SPINK7P58062 85 aa11.18□□□□□ -0.62
PSPC1-201ENST00000338910 SACSQ9NZJ4 4579 aa11.17□□□□□ -0.62
PSPC1-201ENST00000338910 A0A1B0GVX0 72 aa11.16□□□□□ -0.62
PSPC1-201ENST00000338910 C7orf65Q6ZTY9 151 aa11.16□□□□□ -0.62
PSPC1-201ENST00000338910 IGHV6-1A0A0B4J1U7 121 aa11.15□□□□□ -0.62
PSPC1-201ENST00000338910 ZNF861PO60384 105 aa11.15□□□□□ -0.62
PSPC1-201ENST00000338910 ANAPC11Q9NYG5 84 aa11.15□□□□□ -0.62
PSPC1-201ENST00000338910 MRPL34Q9BQ48 92 aaKnown RBP11.13□□□□□ -0.63
PSPC1-201ENST00000338910 LINC00483Q53H64 154 aa11.12□□□□□ -0.63
PSPC1-201ENST00000338910 CIRBP-AS1Q8TBR5 109 aa11.11□□□□□ -0.63
PSPC1-201ENST00000338910 ZNF706Q9Y5V0 76 aaPredicted RBP11.11□□□□□ -0.63
PSPC1-201ENST00000338910 A0A087X002 238 aa11.08□□□□□ -0.64
PSPC1-201ENST00000338910 KRTAP10-1P60331 282 aa11.08□□□□□ -0.64
PSPC1-201ENST00000338910 NOTCH2NLQ7Z3S9 236 aa11.08□□□□□ -0.64
PSPC1-201ENST00000338910 IGLV7-43P04211 117 aa11.07□□□□□ -0.64
PSPC1-201ENST00000338910 CDK2AP2O75956 126 aa11.06□□□□□ -0.64
PSPC1-201ENST00000338910 LRP1BQ9NZR2 4599 aa11.05□□□□□ -0.64
PSPC1-201ENST00000338910 PRR26Q8N8Z3 221 aa11.04□□□□□ -0.64
PSPC1-201ENST00000338910 Q6ZSA8 131 aa11.03□□□□□ -0.64
PSPC1-201ENST00000338910 PKHD1P08F94 4074 aa11.03□□□□□ -0.64
PSPC1-201ENST00000338910 KRTAP13-3Q3SY46 172 aa11□□□□□ -0.65
PSPC1-201ENST00000338910 Q5W150 140 aa11□□□□□ -0.65
PSPC1-201ENST00000338910 KMT2CQ8NEZ4 4911 aaKnown RBP10.95□□□□□ -0.66
PSPC1-201ENST00000338910 ACYP2P14621 99 aa10.94□□□□□ -0.66
PSPC1-201ENST00000338910 RYR2Q92736 4967 aa10.91□□□□□ -0.66
PSPC1-201ENST00000338910 VPS13BQ7Z7G8 4022 aa10.9□□□□□ -0.66
PSPC1-201ENST00000338910 LINC00313P59037 77 aa10.9□□□□□ -0.66
PSPC1-201ENST00000338910 SPINK6Q6UWN8 80 aa10.87□□□□□ -0.67
PSPC1-201ENST00000338910 DMAC1Q96GE9 116 aa10.87□□□□□ -0.67
PSPC1-201ENST00000338910 DYNC1H1Q14204 4646 aaKnown RBP10.84□□□□□ -0.67
PSPC1-201ENST00000338910 LINC01554Q52M75 96 aa10.83□□□□□ -0.68
PSPC1-201ENST00000338910 PRAC1Q96KF2 57 aa10.83□□□□□ -0.68
PSPC1-201ENST00000338910 SSBP3-AS1Q7Z2R9 100 aa10.81□□□□□ -0.68
PSPC1-201ENST00000338910 A0A1B0GVY2 172 aa10.79□□□□□ -0.68
PSPC1-201ENST00000338910 PLA2G1BP04054 148 aaKnown RBP10.79□□□□□ -0.68
PSPC1-201ENST00000338910 A0A1B0GU69 56 aa10.78□□□□□ -0.68
PSPC1-201ENST00000338910 KRTAP13-2Q52LG2 175 aa10.78□□□□□ -0.68
PSPC1-201ENST00000338910 SPATA8Q6RVD6 105 aa10.77□□□□□ -0.68
PSPC1-201ENST00000338910 ADM2Q7Z4H4 148 aa10.77□□□□□ -0.68
PSPC1-201ENST00000338910 FAM229AH3BQW9 127 aa10.72□□□□□ -0.69
PSPC1-201ENST00000338910 KRTAP1-4P0C5Y4 121 aa10.72□□□□□ -0.69
PSPC1-201ENST00000338910 SMR3BP02814 79 aaPredicted RBP10.71□□□□□ -0.69
PSPC1-201ENST00000338910 APOBP04114 4563 aaKnown RBP10.7□□□□□ -0.7
PSPC1-201ENST00000338910 IGKV2-30P06310 120 aa10.7□□□□□ -0.7
PSPC1-201ENST00000338910 FAT1Q14517 4588 aa10.69□□□□□ -0.7
PSPC1-201ENST00000338910 MIR22HGQ0VDD5 57 aa10.67□□□□□ -0.7
PSPC1-201ENST00000338910 RETNLBQ9BQ08 111 aa10.66□□□□□ -0.7
PSPC1-201ENST00000338910 RYR3Q15413 4870 aa10.66□□□□□ -0.7
PSPC1-201ENST00000338910 UQCR11O14957 56 aa10.66□□□□□ -0.7
PSPC1-201ENST00000338910 TYMSOSQ8TAI1 123 aa10.59□□□□□ -0.71
PSPC1-201ENST00000338910 KRTAP16-1A8MUX0 517 aa10.56□□□□□ -0.72
PSPC1-201ENST00000338910 KRTAP10-4P60372 401 aaPredicted RBP10.52□□□□□ -0.73
PSPC1-201ENST00000338910 IGKV2D-30A0A075B6S6 120 aa10.49□□□□□ -0.73
PSPC1-201ENST00000338910 SPINK1P00995 79 aa10.47□□□□□ -0.73
PSPC1-201ENST00000338910 CSAG1Q6PB30 78 aa10.46□□□□□ -0.74
PSPC1-201ENST00000338910 LINC00304Q8N9R0 145 aa10.43□□□□□ -0.74
PSPC1-201ENST00000338910 HSPG2P98160 4391 aa10.39□□□□□ -0.75
PSPC1-201ENST00000338910 PKHD1L1Q86WI1 4243 aa10.33□□□□□ -0.76
PSPC1-201ENST00000338910 RYR1P21817 5038 aa10.33□□□□□ -0.76
PSPC1-201ENST00000338910 KIAA1109Q2LD37 5005 aa10.31□□□□□ -0.76
PSPC1-201ENST00000338910 RPS29P62273 56 aaKnown RBP10.3□□□□□ -0.76
PSPC1-201ENST00000338910 EPPK1P58107 5090 aaKnown RBP10.29□□□□□ -0.76
PSPC1-201ENST00000338910 LRP1Q07954 4544 aaKnown RBP10.29□□□□□ -0.76
PSPC1-201ENST00000338910 Q8N1X5 172 aa10.28□□□□□ -0.76
PSPC1-201ENST00000338910 Q5VSD8 79 aa10.28□□□□□ -0.76
PSPC1-201ENST00000338910 H0YAA0 97 aa10.24□□□□□ -0.77
PSPC1-201ENST00000338910 A8MUU9 505 aa10.23□□□□□ -0.77
PSPC1-201ENST00000338910 KRTAP17-1Q9BYP8 105 aa10.23□□□□□ -0.77
PSPC1-201ENST00000338910 FLG2Q5D862 2391 aaPredicted RBP10.18□□□□□ -0.78
PSPC1-201ENST00000338910 C9orf92A6NGG3 77 aa10.17□□□□□ -0.78
PSPC1-201ENST00000338910 TNXBP22105 4242 aa10.17□□□□□ -0.78
PSPC1-201ENST00000338910 KRTAP25-1Q3LHN0 102 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms