RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 IGHV6-1A0A0B4J1U7 121 aa5.04□□□□□ -1.6
SKA2-201ENST00000330137 LINC00483Q53H64 154 aa5.04□□□□□ -1.6
SKA2-201ENST00000330137 KRTAP13-1Q8IUC0 172 aa5.03□□□□□ -1.6
SKA2-201ENST00000330137 KRTAP10-11P60412 298 aa5.03□□□□□ -1.6
SKA2-201ENST00000330137 CASC10Q5T4H9 136 aa5.03□□□□□ -1.6
SKA2-201ENST00000330137 C14orf177Q52M58 125 aa5.02□□□□□ -1.61
SKA2-201ENST00000330137 ZNF706Q9Y5V0 76 aaPredicted RBP5□□□□□ -1.61
SKA2-201ENST00000330137 K7EIL1 84 aa4.99□□□□□ -1.61
SKA2-201ENST00000330137 NBEAL2Q6ZNJ1 2754 aa4.99□□□□□ -1.61
SKA2-201ENST00000330137 CSAG1Q6PB30 78 aa4.99□□□□□ -1.61
SKA2-201ENST00000330137 ZNF861PO60384 105 aa4.97□□□□□ -1.61
SKA2-201ENST00000330137 TGP01266 2768 aa4.96□□□□□ -1.61
SKA2-201ENST00000330137 CHTF8P0CG12 524 aa4.96□□□□□ -1.62
SKA2-201ENST00000330137 DNAH1Q9P2D7 4330 aa4.96□□□□□ -1.62
SKA2-201ENST00000330137 Q5W150 140 aa4.96□□□□□ -1.62
SKA2-201ENST00000330137 KRTAP11-1Q8IUC1 163 aa4.95□□□□□ -1.62
SKA2-201ENST00000330137 TENM2Q9NT68 2774 aa4.95□□□□□ -1.62
SKA2-201ENST00000330137 PRKDCP78527 4128 aaKnown RBP4.94□□□□□ -1.62
SKA2-201ENST00000330137 IGLV7-43P04211 117 aa4.93□□□□□ -1.62
SKA2-201ENST00000330137 DNAH3Q8TD57 4116 aa4.93□□□□□ -1.62
SKA2-201ENST00000330137 IGKV2-30P06310 120 aa4.93□□□□□ -1.62
SKA2-201ENST00000330137 WWC2-AS2Q96NR7 200 aa4.93□□□□□ -1.62
SKA2-201ENST00000330137 IGLV9-49A0A0B4J1Y8 123 aa4.92□□□□□ -1.62
SKA2-201ENST00000330137 NOTCH2NLQ7Z3S9 236 aa4.91□□□□□ -1.62
SKA2-201ENST00000330137 KRTAP25-1Q3LHN0 102 aa4.9□□□□□ -1.62
SKA2-201ENST00000330137 C1orf134Q5TEV5 83 aa4.9□□□□□ -1.62
SKA2-201ENST00000330137 ROMO1P60602 79 aa4.9□□□□□ -1.63
SKA2-201ENST00000330137 COL7A1Q02388 2944 aa4.88□□□□□ -1.63
SKA2-201ENST00000330137 LORP23490 312 aaPredicted RBP4.87□□□□□ -1.63
SKA2-201ENST00000330137 A8MUU9 505 aa4.87□□□□□ -1.63
SKA2-201ENST00000330137 LY6G6CO95867 125 aa4.87□□□□□ -1.63
SKA2-201ENST00000330137 IGKV2D-30A0A075B6S6 120 aa4.85□□□□□ -1.63
SKA2-201ENST00000330137 A0A0A0MQY5 61 aa4.83□□□□□ -1.64
SKA2-201ENST00000330137 SSBP3-AS1Q7Z2R9 100 aa4.83□□□□□ -1.64
SKA2-201ENST00000330137 SPACA4Q8TDM5 124 aa4.83□□□□□ -1.64
SKA2-201ENST00000330137 DNAH9Q9NYC9 4486 aa4.82□□□□□ -1.64
SKA2-201ENST00000330137 KRTAP1-5Q9BYS1 174 aa4.82□□□□□ -1.64
SKA2-201ENST00000330137 IGLV5-52A0A0A0MRZ9 124 aa4.81□□□□□ -1.64
SKA2-201ENST00000330137 TENM3Q9P273 2699 aa4.8□□□□□ -1.64
SKA2-201ENST00000330137 STAB2Q8WWQ8 2551 aa4.79□□□□□ -1.64
SKA2-201ENST00000330137 SPINK6Q6UWN8 80 aa4.79□□□□□ -1.64
SKA2-201ENST00000330137 LINC00304Q8N9R0 145 aa4.79□□□□□ -1.64
SKA2-201ENST00000330137 HUWE1Q7Z6Z7 4374 aaKnown RBP4.79□□□□□ -1.64
SKA2-201ENST00000330137 KRTAP16-1A8MUX0 517 aa4.77□□□□□ -1.65
SKA2-201ENST00000330137 ANAPC11Q9NYG5 84 aa4.77□□□□□ -1.65
SKA2-201ENST00000330137 PSORS1C2Q9UIG4 136 aa4.76□□□□□ -1.65
SKA2-201ENST00000330137 PANO1I0J062 215 aa4.76□□□□□ -1.65
SKA2-201ENST00000330137 H0YAA0 97 aa4.75□□□□□ -1.65
SKA2-201ENST00000330137 Q6ZSA8 131 aa4.75□□□□□ -1.65
SKA2-201ENST00000330137 UBE2DNLQ8IWF7 75 aa4.75□□□□□ -1.65
SKA2-201ENST00000330137 K7ERS5 55 aa4.74□□□□□ -1.65
SKA2-201ENST00000330137 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.73□□□□□ -1.65
SKA2-201ENST00000330137 NUPR2A6NF83 97 aa4.73□□□□□ -1.65
SKA2-201ENST00000330137 DNAH7Q8WXX0 4024 aa4.73□□□□□ -1.65
SKA2-201ENST00000330137 Q6ZRN7 208 aaPredicted RBP4.72□□□□□ -1.65
SKA2-201ENST00000330137 APLNQ9ULZ1 77 aa4.72□□□□□ -1.65
SKA2-201ENST00000330137 CSMD3Q7Z407 3707 aa4.72□□□□□ -1.65
SKA2-201ENST00000330137 CIRBP-AS1Q8TBR5 109 aa4.72□□□□□ -1.65
SKA2-201ENST00000330137 A0A1B0GU33 70 aa4.71□□□□□ -1.65
SKA2-201ENST00000330137 NBDYA0A0U1RRE5 68 aa4.7□□□□□ -1.66
SKA2-201ENST00000330137 SRRM2Q9UQ35 2752 aaKnown RBP4.7□□□□□ -1.66
SKA2-201ENST00000330137 H1FX-AS1Q4G0G2 97 aa4.7□□□□□ -1.66
SKA2-201ENST00000330137 STARD9Q9P2P6 4700 aa4.7□□□□□ -1.66
SKA2-201ENST00000330137 P0C880 135 aa4.68□□□□□ -1.66
SKA2-201ENST00000330137 KMT2CQ8NEZ4 4911 aaKnown RBP4.67□□□□□ -1.66
SKA2-201ENST00000330137 LYSTQ99698 3801 aa4.65□□□□□ -1.66
SKA2-201ENST00000330137 A0A087WTM6 91 aa4.64□□□□□ -1.67
SKA2-201ENST00000330137 DNAH10Q8IVF4 4471 aa4.63□□□□□ -1.67
SKA2-201ENST00000330137 SPINK1P00995 79 aa4.63□□□□□ -1.67
SKA2-201ENST00000330137 RYR3Q15413 4870 aa4.61□□□□□ -1.67
SKA2-201ENST00000330137 PLECQ15149 4684 aaKnown RBP4.61□□□□□ -1.67
SKA2-201ENST00000330137 COX6B2Q6YFQ2 88 aa4.6□□□□□ -1.67
SKA2-201ENST00000330137 TYMSOSQ8TAI1 123 aa4.6□□□□□ -1.67
SKA2-201ENST00000330137 HYDINQ4G0P3 5121 aa4.59□□□□□ -1.67
SKA2-201ENST00000330137 Q8N1X5 172 aa4.59□□□□□ -1.68
SKA2-201ENST00000330137 DYNC2H1Q8NCM8 4307 aaKnown RBP4.58□□□□□ -1.68
SKA2-201ENST00000330137 DNAH8Q96JB1 4490 aa4.58□□□□□ -1.68
SKA2-201ENST00000330137 RYR2Q92736 4967 aa4.58□□□□□ -1.68
SKA2-201ENST00000330137 RPS29P62273 56 aaKnown RBP4.57□□□□□ -1.68
SKA2-201ENST00000330137 KRTAP13-2Q52LG2 175 aa4.57□□□□□ -1.68
SKA2-201ENST00000330137 SACSQ9NZJ4 4579 aa4.56□□□□□ -1.68
SKA2-201ENST00000330137 C20orf166-AS1Q96NR2 134 aa4.56□□□□□ -1.68
SKA2-201ENST00000330137 FRAS1Q86XX4 4008 aa4.56□□□□□ -1.68
SKA2-201ENST00000330137 KMT2AQ03164 3969 aa4.56□□□□□ -1.68
SKA2-201ENST00000330137 SPINT4Q6UDR6 99 aa4.55□□□□□ -1.68
SKA2-201ENST00000330137 KRTAP15-1Q3LI76 137 aa4.55□□□□□ -1.68
SKA2-201ENST00000330137 RPL37P61927 97 aaKnown RBP4.54□□□□□ -1.68
SKA2-201ENST00000330137 VPS13DQ5THJ4 4388 aa4.53□□□□□ -1.68
SKA2-201ENST00000330137 KRTAP3-1Q9BYR8 98 aa4.5□□□□□ -1.69
SKA2-201ENST00000330137 TPRXLQ17RH7 258 aa4.48□□□□□ -1.69
SKA2-201ENST00000330137 NDUFAF8A1L188 74 aa4.47□□□□□ -1.69
SKA2-201ENST00000330137 KRTAP1-4P0C5Y4 121 aa4.47□□□□□ -1.69
SKA2-201ENST00000330137 CRIPTQ9P021 101 aa4.47□□□□□ -1.69
SKA2-201ENST00000330137 HECTD4Q9Y4D8 3996 aa4.47□□□□□ -1.69
SKA2-201ENST00000330137 EPPK1P58107 5090 aaKnown RBP4.47□□□□□ -1.69
SKA2-201ENST00000330137 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
SKA2-201ENST00000330137 DNAH6Q9C0G6 4158 aa4.45□□□□□ -1.7
SKA2-201ENST00000330137 DNAH17Q9UFH2 4485 aa4.44□□□□□ -1.7
SKA2-201ENST00000330137 DNAH2Q9P225 4427 aa4.42□□□□□ -1.7
SKA2-201ENST00000330137 A0A1B0GVY2 172 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms